EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000014472 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 809 bases
Position: chrPEQF01098756.1:1602656-1603464
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000018453	MMR_HSR1	PF01926.23	0.00019	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000019083	-	432	-	ENSSLDP00000018453	143 (aa)	-	-

Gene Model

Click here to download ENSSLDG00000014472's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000014472's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000014472	-	86	37.903	ENSSLDG00000011757	-	56	37.500
ENSSLDG00000014472	-	94	37.037	ENSSLDG00000018681	rheb	65	37.190
ENSSLDG00000014472	-	87	34.884	ENSSLDG00000012391	RAB7A	57	32.203
ENSSLDG00000014472	-	84	55.833	ENSSLDG00000022168	kras	64	55.833
ENSSLDG00000014472	-	88	36.220	ENSSLDG00000003264	rab6ba	61	36.220
ENSSLDG00000014472	-	80	32.759	ENSSLDG00000006014	rab18b	51	31.429
ENSSLDG00000014472	-	83	36.364	ENSSLDG00000006977	rab18a	52	36.111
ENSSLDG00000014472	-	89	51.181	ENSSLDG00000015122	rras2	56	50.000
ENSSLDG00000014472	-	87	34.400	ENSSLDG00000017771	rab5c	50	33.036
ENSSLDG00000014472	-	86	34.677	ENSSLDG00000022555	rab2a	52	33.929
ENSSLDG00000014472	-	85	38.095	ENSSLDG00000004352	-	54	34.783
ENSSLDG00000014472	-	87	30.952	ENSSLDG00000020354	rab42a	52	30.973
ENSSLDG00000014472	-	100	35.374	ENSSLDG00000020438	rab22a	74	35.374
ENSSLDG00000014472	-	89	32.558	ENSSLDG00000006360	RAB39B	54	32.759
ENSSLDG00000014472	-	86	34.677	ENSSLDG00000003631	si:dkey-16l2.16	53	34.821
ENSSLDG00000014472	-	87	43.548	ENSSLDG00000013333	si:cabz01085950.1	55	42.342
ENSSLDG00000014472	-	84	55.000	ENSSLDG00000012627	hrasb	63	55.000
ENSSLDG00000014472	-	86	37.903	ENSSLDG00000018942	rab1ab	55	37.500
ENSSLDG00000014472	-	88	37.008	ENSSLDG00000012474	rab6bb	61	37.008
ENSSLDG00000014472	-	84	38.333	ENSSLDG00000025169	rhebl1	59	37.615
ENSSLDG00000014472	-	86	32.258	ENSSLDG00000010503	rab14	52	31.250
ENSSLDG00000014472	-	85	35.659	ENSSLDG00000020918	RAB17	50	33.884
ENSSLDG00000014472	-	87	34.375	ENSSLDG00000002646	si:dkey-34d22.5	52	34.783
ENSSLDG00000014472	-	83	31.538	ENSSLDG00000024730	rasl10a	61	31.452
ENSSLDG00000014472	-	89	38.583	ENSSLDG00000017618	rasd4	55	37.391
ENSSLDG00000014472	-	91	35.338	ENSSLDG00000022533	rab30	58	33.884
ENSSLDG00000014472	-	96	35.507	ENSSLDG00000022282	rab41	65	35.507
ENSSLDG00000014472	-	85	37.302	ENSSLDG00000000773	rab9a	56	33.913
ENSSLDG00000014472	-	86	33.065	ENSSLDG00000023317	rab15	52	32.143
ENSSLDG00000014472	-	73	32.075	ENSSLDG00000000287	rab23	51	32.075
ENSSLDG00000014472	-	86	31.452	ENSSLDG00000005718	-	52	30.357
ENSSLDG00000014472	-	86	37.097	ENSSLDG00000012251	rab1ba	55	36.607
ENSSLDG00000014472	-	87	34.884	ENSSLDG00000024959	-	57	32.203
ENSSLDG00000014472	-	87	35.200	ENSSLDG00000011069	rab5aa	51	33.929
ENSSLDG00000014472	-	86	34.677	ENSSLDG00000021984	RAB15	52	33.929
ENSSLDG00000014472	-	89	32.558	ENSSLDG00000009068	-	53	33.628
ENSSLDG00000014472	-	87	39.062	ENSSLDG00000009351	rab9b	57	35.897
ENSSLDG00000014472	-	86	36.290	ENSSLDG00000015823	-	56	35.714
ENSSLDG00000014472	-	84	38.525	ENSSLDG00000008584	rab33ba	57	38.525
ENSSLDG00000014472	-	88	37.008	ENSSLDG00000015289	-	61	37.008
ENSSLDG00000014472	-	86	50.407	ENSSLDG00000021833	si:ch73-116o1.2	53	47.748
ENSSLDG00000014472	-	92	36.496	ENSSLDG00000019214	zgc:101559	53	35.772
ENSSLDG00000014472	-	85	40.164	ENSSLDG00000002757	-	52	38.739
ENSSLDG00000014472	-	83	33.884	ENSSLDG00000008070	-	50	33.884
ENSSLDG00000014472	-	86	40.000	ENSSLDG00000016267	rasd3	53	38.596

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000014472	-	100	88.811	ENSCPBG00000018802	-	97	88.811	Chrysemys_picta_bellii
ENSSLDG00000014472	-	100	98.601	ENSCSEG00000015746	-	99	98.601	Cynoglossus_semilaevis
ENSSLDG00000014472	-	99	99.296	ENSMMOG00000018992	-	100	99.296	Mola_mola
ENSSLDG00000014472	-	99	97.887	ENSMALG00000015576	-	100	97.887	Monopterus_albus
ENSSLDG00000014472	-	100	100.000	ENSSDUG00000017824	-	100	100.000	Seriola_dumerili