EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000014505 (Gene tree)
Gene ID: -
Gene Symbol: raver1
Alias: zgc:112236
Full Name: ribonucleoprotein%2C PTB binding 1
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 10079 bases
Position: chrPEQF01098998.1:2157853-2167931
Accession: 111660447
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000018429	RRM_1	PF00076.22	2.4e-30	1	2
ENSSLDP00000018429	RRM_1	PF00076.22	2.4e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000019059	-	4011	XM_023413730	ENSSLDP00000018429	733 (aa)	XP_023269498	UPI000C6F85A2

Gene Model

Click here to download ENSSLDG00000014505's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000014505's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000014505	raver1	72	48.542	ENSSLDG00000002746	raver2	63	47.629

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000014505	raver1	92	51.967	ENSG00000161847	RAVER1	79	61.842	Homo_sapiens
ENSSLDG00000014505	raver1	98	90.516	ENSAPOG00000017267	raver1	90	90.516	Acanthochromis_polyacanthus
ENSSLDG00000014505	raver1	91	50.000	ENSAMEG00000011738	RAVER1	76	59.524	Ailuropoda_melanoleuca
ENSSLDG00000014505	raver1	98	92.179	ENSAOCG00000005128	raver1	95	92.179	Amphiprion_ocellaris
ENSSLDG00000014505	raver1	98	92.094	ENSAPEG00000010854	raver1	98	92.094	Amphiprion_percula
ENSSLDG00000014505	raver1	100	91.132	ENSATEG00000021004	raver1	100	91.132	Anabas_testudineus
ENSSLDG00000014505	raver1	78	51.316	ENSACAG00000008386	-	74	56.582	Anolis_carolinensis
ENSSLDG00000014505	raver1	80	60.433	ENSANAG00000028226	RAVER1	77	59.961	Aotus_nancymaae
ENSSLDG00000014505	raver1	100	87.193	ENSACLG00000018492	raver1	94	87.414	Astatotilapia_calliptera
ENSSLDG00000014505	raver1	98	69.041	ENSAMXG00000005132	raver1	99	66.798	Astyanax_mexicanus
ENSSLDG00000014505	raver1	74	82.000	ENSBTAG00000015721	RAVER1	97	52.039	Bos_taurus
ENSSLDG00000014505	raver1	67	59.961	ENSCJAG00000005671	RAVER1	66	59.961	Callithrix_jacchus
ENSSLDG00000014505	raver1	94	51.182	ENSCAFG00000017861	RAVER1	96	51.043	Canis_familiaris
ENSSLDG00000014505	raver1	94	51.182	ENSCAFG00020024449	RAVER1	98	51.043	Canis_lupus_dingo
ENSSLDG00000014505	raver1	80	58.065	ENSCHIG00000006718	RAVER1	78	64.000	Capra_hircus
ENSSLDG00000014505	raver1	67	82.000	ENSCAPG00000002269	RAVER1	79	60.714	Cavia_aperea
ENSSLDG00000014505	raver1	68	58.027	ENSCPOG00000001008	RAVER1	68	59.684	Cavia_porcellus
ENSSLDG00000014505	raver1	67	60.474	ENSCCAG00000031723	RAVER1	95	52.316	Cebus_capucinus
ENSSLDG00000014505	raver1	74	83.333	ENSCATG00000043863	RAVER1	71	83.333	Cercocebus_atys
ENSSLDG00000014505	raver1	80	60.161	ENSCSAG00000007317	RAVER1	65	60.161	Chlorocebus_sabaeus
ENSSLDG00000014505	raver1	95	52.406	ENSCPBG00000005349	-	99	51.895	Chrysemys_picta_bellii
ENSSLDG00000014505	raver1	66	59.960	ENSCANG00000008337	RAVER1	65	59.960	Colobus_angolensis_palliatus
ENSSLDG00000014505	raver1	66	57.708	ENSCGRG00001013260	-	68	58.527	Cricetulus_griseus_chok1gshd
ENSSLDG00000014505	raver1	66	57.708	ENSCGRG00000015138	-	68	58.527	Cricetulus_griseus_crigri
ENSSLDG00000014505	raver1	98	79.670	ENSCSEG00000021092	raver1	98	79.670	Cynoglossus_semilaevis
ENSSLDG00000014505	raver1	100	81.905	ENSCVAG00000013971	raver1	98	82.410	Cyprinodon_variegatus
ENSSLDG00000014505	raver1	98	71.369	ENSDARG00000052617	raver1	98	70.124	Danio_rerio
ENSSLDG00000014505	raver1	51	84.000	ENSDNOG00000035742	-	57	60.983	Dasypus_novemcinctus
ENSSLDG00000014505	raver1	93	46.684	ENSDORG00000010106	-	68	62.287	Dipodomys_ordii
ENSSLDG00000014505	raver1	50	51.213	ENSETEG00000008201	-	55	70.352	Echinops_telfairi
ENSSLDG00000014505	raver1	53	66.838	ENSEASG00005010544	-	72	66.244	Equus_asinus_asinus
ENSSLDG00000014505	raver1	68	67.342	ENSECAG00000024966	RAVER1	76	60.040	Equus_caballus
ENSSLDG00000014505	raver1	100	78.095	ENSELUG00000023287	raver1	100	76.902	Esox_lucius
ENSSLDG00000014505	raver1	91	50.138	ENSFCAG00000009435	RAVER1	76	59.524	Felis_catus
ENSSLDG00000014505	raver1	91	51.486	ENSFDAG00000015113	RAVER1	79	59.883	Fukomys_damarensis
ENSSLDG00000014505	raver1	94	73.174	ENSGMOG00000003649	raver1	100	73.398	Gadus_morhua
ENSSLDG00000014505	raver1	65	40.246	ENSGALG00000050608	-	51	39.592	Gallus_gallus
ENSSLDG00000014505	raver1	100	83.152	ENSGAFG00000015944	raver1	98	83.679	Gambusia_affinis
ENSSLDG00000014505	raver1	95	76.158	ENSGACG00000013818	raver1	100	78.610	Gasterosteus_aculeatus
ENSSLDG00000014505	raver1	80	70.430	ENSGAGG00000011748	-	99	67.677	Gopherus_agassizii
ENSSLDG00000014505	raver1	92	51.832	ENSGGOG00000006015	RAVER1	66	59.486	Gorilla_gorilla
ENSSLDG00000014505	raver1	99	87.106	ENSHBUG00000021210	raver1	93	87.326	Haplochromis_burtoni
ENSSLDG00000014505	raver1	80	59.200	ENSHGLG00000015460	RAVER1	79	60.714	Heterocephalus_glaber_female
ENSSLDG00000014505	raver1	80	59.200	ENSHGLG00100000812	RAVER1	79	60.714	Heterocephalus_glaber_male
ENSSLDG00000014505	raver1	100	78.776	ENSHCOG00000000449	raver1	96	78.729	Hippocampus_comes
ENSSLDG00000014505	raver1	98	70.637	ENSIPUG00000013153	raver1	98	71.330	Ictalurus_punctatus
ENSSLDG00000014505	raver1	91	50.820	ENSSTOG00000003241	RAVER1	66	59.600	Ictidomys_tridecemlineatus
ENSSLDG00000014505	raver1	91	51.084	ENSJJAG00000018219	-	98	49.863	Jaculus_jaculus
ENSSLDG00000014505	raver1	100	85.286	ENSKMAG00000017355	raver1	98	85.477	Kryptolebias_marmoratus
ENSSLDG00000014505	raver1	92	90.413	ENSLBEG00000008268	raver1	94	89.940	Labrus_bergylta
ENSSLDG00000014505	raver1	85	51.351	ENSLACG00000005809	-	80	60.920	Latimeria_chalumnae
ENSSLDG00000014505	raver1	96	63.179	ENSLOCG00000007500	raver1	96	63.200	Lepisosteus_oculatus
ENSSLDG00000014505	raver1	85	57.553	ENSLAFG00000003664	-	80	60.714	Loxodonta_africana
ENSSLDG00000014505	raver1	66	60.161	ENSMFAG00000037977	RAVER1	65	60.161	Macaca_fascicularis
ENSSLDG00000014505	raver1	80	60.161	ENSMMUG00000014897	RAVER1	76	60.161	Macaca_mulatta
ENSSLDG00000014505	raver1	72	83.333	ENSMNEG00000028390	RAVER1	70	83.333	Macaca_nemestrina
ENSSLDG00000014505	raver1	74	83.333	ENSMLEG00000041959	RAVER1	71	83.333	Mandrillus_leucophaeus
ENSSLDG00000014505	raver1	100	90.450	ENSMAMG00000012059	raver1	98	90.443	Mastacembelus_armatus
ENSSLDG00000014505	raver1	100	87.193	ENSMZEG00005019002	raver1	98	87.414	Maylandia_zebra
ENSSLDG00000014505	raver1	66	58.103	ENSMAUG00000017948	-	68	58.090	Mesocricetus_auratus
ENSSLDG00000014505	raver1	92	51.690	ENSMICG00000010326	RAVER1	71	59.245	Microcebus_murinus
ENSSLDG00000014505	raver1	66	57.708	ENSMOCG00000015553	-	68	58.721	Microtus_ochrogaster
ENSSLDG00000014505	raver1	98	89.197	ENSMMOG00000012093	raver1	100	88.540	Mola_mola
ENSSLDG00000014505	raver1	90	50.143	ENSMODG00000005584	-	94	48.853	Monodelphis_domestica
ENSSLDG00000014505	raver1	100	86.240	ENSMALG00000016569	raver1	99	88.105	Monopterus_albus
ENSSLDG00000014505	raver1	83	56.757	MGP_CAROLIEiJ_G0031860	-	80	61.905	Mus_caroli
ENSSLDG00000014505	raver1	66	56.582	ENSMUSG00000010205	Raver1	68	57.663	Mus_musculus
ENSSLDG00000014505	raver1	80	55.856	MGP_PahariEiJ_G0014726	-	80	60.714	Mus_pahari
ENSSLDG00000014505	raver1	66	56.385	MGP_SPRETEiJ_G0032984	-	68	57.471	Mus_spretus
ENSSLDG00000014505	raver1	80	58.954	ENSMPUG00000006712	RAVER1	77	59.524	Mustela_putorius_furo
ENSSLDG00000014505	raver1	66	58.532	ENSMLUG00000012328	RAVER1	96	51.591	Myotis_lucifugus
ENSSLDG00000014505	raver1	54	64.736	ENSNGAG00000001260	-	69	63.614	Nannospalax_galili
ENSSLDG00000014505	raver1	100	78.610	ENSNBRG00000010139	raver1	98	78.008	Neolamprologus_brichardi
ENSSLDG00000014505	raver1	67	59.172	ENSNLEG00000012181	RAVER1	66	59.172	Nomascus_leucogenys
ENSSLDG00000014505	raver1	77	59.477	ENSMEUG00000003281	-	81	61.905	Notamacropus_eugenii
ENSSLDG00000014505	raver1	68	58.696	ENSODEG00000016260	RAVER1	98	47.678	Octodon_degus
ENSSLDG00000014505	raver1	92	85.044	ENSONIG00000001559	raver1	100	85.044	Oreochromis_niloticus
ENSSLDG00000014505	raver1	92	49.512	ENSOCUG00000020918	RAVER1	97	50.070	Oryctolagus_cuniculus
ENSSLDG00000014505	raver1	100	82.401	ENSORLG00000005458	raver1	98	82.548	Oryzias_latipes
ENSSLDG00000014505	raver1	100	82.674	ENSORLG00020004392	raver1	98	82.825	Oryzias_latipes_hni
ENSSLDG00000014505	raver1	100	83.083	ENSORLG00015017222	raver1	98	83.241	Oryzias_latipes_hsok
ENSSLDG00000014505	raver1	100	83.333	ENSOMEG00000023956	raver1	98	92.453	Oryzias_melastigma
ENSSLDG00000014505	raver1	92	50.742	ENSOGAG00000011071	RAVER1	77	59.486	Otolemur_garnettii
ENSSLDG00000014505	raver1	74	82.000	ENSOARG00000015886	RAVER1	74	75.439	Ovis_aries
ENSSLDG00000014505	raver1	92	51.967	ENSPPAG00000002611	RAVER1	66	59.486	Pan_paniscus
ENSSLDG00000014505	raver1	91	50.276	ENSPPRG00000009912	RAVER1	76	59.524	Panthera_pardus
ENSSLDG00000014505	raver1	92	51.967	ENSPTRG00000010466	RAVER1	66	59.486	Pan_troglodytes
ENSSLDG00000014505	raver1	67	59.684	ENSPANG00000004122	RAVER1	66	59.684	Papio_anubis
ENSSLDG00000014505	raver1	66	57.708	ENSPEMG00000016411	-	68	58.527	Peromyscus_maniculatus_bairdii
ENSSLDG00000014505	raver1	93	52.900	ENSPCIG00000018695	-	98	51.627	Phascolarctos_cinereus
ENSSLDG00000014505	raver1	100	79.144	ENSPFOG00000007016	raver1	98	81.497	Poecilia_formosa
ENSSLDG00000014505	raver1	95	80.973	ENSPLAG00000020793	raver1	97	81.487	Poecilia_latipinna
ENSSLDG00000014505	raver1	100	83.152	ENSPMEG00000011220	raver1	98	83.679	Poecilia_mexicana
ENSSLDG00000014505	raver1	100	77.687	ENSPREG00000006864	raver1	98	78.116	Poecilia_reticulata
ENSSLDG00000014505	raver1	80	59.684	ENSPPYG00000010514	RAVER1	81	52.060	Pongo_abelii
ENSSLDG00000014505	raver1	92	50.476	ENSPCOG00000026605	RAVER1	77	58.939	Propithecus_coquereli
ENSSLDG00000014505	raver1	72	82.000	ENSPVAG00000003689	RAVER1	98	50.687	Pteropus_vampyrus
ENSSLDG00000014505	raver1	100	81.335	ENSPNYG00000013284	raver1	98	80.913	Pundamilia_nyererei
ENSSLDG00000014505	raver1	98	72.503	ENSPNAG00000015476	raver1	98	71.721	Pygocentrus_nattereri
ENSSLDG00000014505	raver1	66	56.751	ENSRNOG00000020710	Raver1	98	50.598	Rattus_norvegicus
ENSSLDG00000014505	raver1	92	51.321	ENSRBIG00000034702	RAVER1	71	83.333	Rhinopithecus_bieti
ENSSLDG00000014505	raver1	92	51.648	ENSRROG00000031186	RAVER1	71	83.333	Rhinopithecus_roxellana
ENSSLDG00000014505	raver1	92	51.842	ENSSBOG00000023423	RAVER1	95	53.203	Saimiri_boliviensis_boliviensis
ENSSLDG00000014505	raver1	85	52.527	ENSSHAG00000008181	-	90	51.529	Sarcophilus_harrisii
ENSSLDG00000014505	raver1	98	91.989	ENSSMAG00000004546	raver1	100	91.973	Scophthalmus_maximus
ENSSLDG00000014505	raver1	100	99.454	ENSSDUG00000021063	raver1	100	99.454	Seriola_dumerili
ENSSLDG00000014505	raver1	98	91.967	ENSSPAG00000000688	raver1	100	91.951	Stegastes_partitus
ENSSLDG00000014505	raver1	74	75.439	ENSSSCG00000013650	-	79	75.439	Sus_scrofa
ENSSLDG00000014505	raver1	98	82.597	ENSTRUG00000025641	raver1	98	81.768	Takifugu_rubripes
ENSSLDG00000014505	raver1	92	50.136	ENSTTRG00000009552	RAVER1	79	59.524	Tursiops_truncatus
ENSSLDG00000014505	raver1	91	50.970	ENSUAMG00000020385	RAVER1	76	60.041	Ursus_americanus
ENSSLDG00000014505	raver1	94	51.182	ENSVVUG00000028976	RAVER1	96	51.043	Vulpes_vulpes
ENSSLDG00000014505	raver1	90	52.624	ENSXETG00000011622	raver1	94	50.367	Xenopus_tropicalis
ENSSLDG00000014505	raver1	100	84.103	ENSXCOG00000016368	raver1	98	84.647	Xiphophorus_couchianus
ENSSLDG00000014505	raver1	100	84.103	ENSXMAG00000000217	raver1	98	84.647	Xiphophorus_maculatus