EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSLDG00000014733 (Gene tree)
Gene ID: -
Gene Symbol: cnot3a
Alias: fb73b06|fc17h07|wu:fb73b06|wu:fc17h07|zgc:92813
Full Name: CCR4-NOT transcription complex subunit 3-like
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 7479 bases
Position: chrPEQF01098409.1:7734-15212
Accession: 111652179
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000018756	Not3	PF04065.15	3.7e-97	1	1
ENSSLDP00000018738	Not3	PF04065.15	3.8e-97	1	1
ENSSLDP00000018756	NOT2_3_5	PF04153.18	2.8e-26	1	1
ENSSLDP00000018738	NOT2_3_5	PF04153.18	2.9e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000019388	-	3063	XM_023402363	ENSSLDP00000018756	870 (aa)	XP_023258131	-
ENSSLDT00000019370	-	3120	XM_023402361	ENSSLDP00000018738	889 (aa)	XP_023258129	-

Gene Model

Click here to download ENSSLDG00000014733's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000014733's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000014733	cnot3a	66	90.164	ENSG00000088038	CNOT3	100	94.330	Homo_sapiens
ENSSLDG00000014733	cnot3a	57	90.391	ENSAPOG00000015499	CNOT3	86	90.391	Acanthochromis_polyacanthus
ENSSLDG00000014733	cnot3a	56	87.543	ENSAPOG00000015002	cnot3b	71	89.892	Acanthochromis_polyacanthus
ENSSLDG00000014733	cnot3a	66	90.492	ENSAMEG00000004528	CNOT3	81	90.789	Ailuropoda_melanoleuca
ENSSLDG00000014733	cnot3a	66	92.857	ENSACIG00000003652	cnot3b	74	86.179	Amphilophus_citrinellus
ENSSLDG00000014733	cnot3a	99	92.404	ENSACIG00000006635	cnot3a	95	95.547	Amphilophus_citrinellus
ENSSLDG00000014733	cnot3a	99	89.729	ENSAOCG00000023769	cnot3a	98	91.545	Amphiprion_ocellaris
ENSSLDG00000014733	cnot3a	96	60.407	ENSAOCG00000018385	-	83	76.786	Amphiprion_ocellaris
ENSSLDG00000014733	cnot3a	96	62.783	ENSAPEG00000002640	cnot3b	74	86.017	Amphiprion_percula
ENSSLDG00000014733	cnot3a	99	93.523	ENSAPEG00000006624	cnot3a	98	91.260	Amphiprion_percula
ENSSLDG00000014733	cnot3a	99	95.227	ENSATEG00000022737	cnot3a	96	95.227	Anabas_testudineus
ENSSLDG00000014733	cnot3a	67	90.260	ENSACAG00000016085	CNOT3	84	90.789	Anolis_carolinensis
ENSSLDG00000014733	cnot3a	66	90.164	ENSANAG00000025756	CNOT3	80	90.461	Aotus_nancymaae
ENSSLDG00000014733	cnot3a	99	94.886	ENSACLG00000021136	cnot3a	96	94.886	Astatotilapia_calliptera
ENSSLDG00000014733	cnot3a	99	66.052	ENSAMXG00000009447	cnot3b	65	88.889	Astyanax_mexicanus
ENSSLDG00000014733	cnot3a	99	74.419	ENSAMXG00000012359	cnot3a	96	73.363	Astyanax_mexicanus
ENSSLDG00000014733	cnot3a	66	89.068	ENSBTAG00000014900	CNOT3	81	90.461	Bos_taurus
ENSSLDG00000014733	cnot3a	66	90.164	ENSCJAG00000001094	CNOT3	80	90.461	Callithrix_jacchus
ENSSLDG00000014733	cnot3a	66	90.164	ENSCAFG00000002699	CNOT3	80	90.461	Canis_familiaris
ENSSLDG00000014733	cnot3a	66	90.164	ENSCAFG00020018359	CNOT3	80	90.461	Canis_lupus_dingo
ENSSLDG00000014733	cnot3a	61	87.097	ENSCHIG00000015302	CNOT3	73	88.449	Capra_hircus
ENSSLDG00000014733	cnot3a	66	90.164	ENSTSYG00000008058	CNOT3	81	90.461	Carlito_syrichta
ENSSLDG00000014733	cnot3a	66	89.068	ENSCAPG00000009533	CNOT3	80	90.461	Cavia_aperea
ENSSLDG00000014733	cnot3a	66	89.068	ENSCPOG00000020741	CNOT3	80	90.461	Cavia_porcellus
ENSSLDG00000014733	cnot3a	66	90.164	ENSCCAG00000036290	CNOT3	80	90.461	Cebus_capucinus
ENSSLDG00000014733	cnot3a	66	90.164	ENSCATG00000030324	CNOT3	80	90.461	Cercocebus_atys
ENSSLDG00000014733	cnot3a	66	89.068	ENSCLAG00000003302	CNOT3	81	90.461	Chinchilla_lanigera
ENSSLDG00000014733	cnot3a	66	90.164	ENSCSAG00000001900	CNOT3	80	90.461	Chlorocebus_sabaeus
ENSSLDG00000014733	cnot3a	67	89.610	ENSCPBG00000011655	CNOT3	84	90.461	Chrysemys_picta_bellii
ENSSLDG00000014733	cnot3a	75	52.209	ENSCING00000000293	-	68	67.623	Ciona_intestinalis
ENSSLDG00000014733	cnot3a	66	88.746	ENSCANG00000013408	CNOT3	80	90.461	Colobus_angolensis_palliatus
ENSSLDG00000014733	cnot3a	66	90.492	ENSCGRG00001000855	Cnot3	80	90.789	Cricetulus_griseus_chok1gshd
ENSSLDG00000014733	cnot3a	99	56.488	ENSCSEG00000016892	cnot3b	66	81.250	Cynoglossus_semilaevis
ENSSLDG00000014733	cnot3a	99	92.385	ENSCSEG00000003574	cnot3a	97	92.945	Cynoglossus_semilaevis
ENSSLDG00000014733	cnot3a	99	87.386	ENSCVAG00000008168	cnot3a	96	87.727	Cyprinodon_variegatus
ENSSLDG00000014733	cnot3a	99	76.233	ENSDARG00000007135	cnot3a	96	75.730	Danio_rerio
ENSSLDG00000014733	cnot3a	66	90.164	ENSDNOG00000045972	CNOT3	80	90.461	Dasypus_novemcinctus
ENSSLDG00000014733	cnot3a	66	90.164	ENSDORG00000008021	Cnot3	80	90.461	Dipodomys_ordii
ENSSLDG00000014733	cnot3a	50	90.268	ENSETEG00000006305	CNOT3	55	90.268	Echinops_telfairi
ENSSLDG00000014733	cnot3a	70	72.078	ENSEBUG00000010437	cnot3a	67	69.481	Eptatretus_burgeri
ENSSLDG00000014733	cnot3a	66	90.164	ENSEASG00005021591	CNOT3	80	90.461	Equus_asinus_asinus
ENSSLDG00000014733	cnot3a	66	90.164	ENSECAG00000023181	CNOT3	81	90.461	Equus_caballus
ENSSLDG00000014733	cnot3a	99	81.567	ENSELUG00000014743	cnot3a	97	81.326	Esox_lucius
ENSSLDG00000014733	cnot3a	66	89.068	ENSFCAG00000014042	CNOT3	81	90.461	Felis_catus
ENSSLDG00000014733	cnot3a	99	85.925	ENSFHEG00000023166	cnot3a	91	99.145	Fundulus_heteroclitus
ENSSLDG00000014733	cnot3a	97	81.618	ENSGMOG00000005365	cnot3a	98	81.481	Gadus_morhua
ENSSLDG00000014733	cnot3a	99	88.977	ENSGAFG00000013094	cnot3a	96	87.401	Gambusia_affinis
ENSSLDG00000014733	cnot3a	96	84.400	ENSGACG00000011489	cnot3a	98	84.866	Gasterosteus_aculeatus
ENSSLDG00000014733	cnot3a	67	82.680	ENSGAGG00000012677	CNOT3	82	88.018	Gopherus_agassizii
ENSSLDG00000014733	cnot3a	66	90.164	ENSGGOG00000012996	CNOT3	82	90.461	Gorilla_gorilla
ENSSLDG00000014733	cnot3a	99	95.000	ENSHBUG00000005275	cnot3a	96	95.000	Haplochromis_burtoni
ENSSLDG00000014733	cnot3a	66	89.068	ENSHGLG00000008821	CNOT3	81	90.461	Heterocephalus_glaber_female
ENSSLDG00000014733	cnot3a	59	84.291	ENSHGLG00100006181	CNOT3	77	82.156	Heterocephalus_glaber_male
ENSSLDG00000014733	cnot3a	99	85.121	ENSHCOG00000020968	cnot3a	96	86.044	Hippocampus_comes
ENSSLDG00000014733	cnot3a	99	66.554	ENSIPUG00000000167	cnot3	57	95.299	Ictalurus_punctatus
ENSSLDG00000014733	cnot3a	66	90.164	ENSSTOG00000028248	CNOT3	80	90.461	Ictidomys_tridecemlineatus
ENSSLDG00000014733	cnot3a	66	90.492	ENSJJAG00000014594	Cnot3	81	90.789	Jaculus_jaculus
ENSSLDG00000014733	cnot3a	99	91.403	ENSKMAG00000004863	cnot3a	96	90.950	Kryptolebias_marmoratus
ENSSLDG00000014733	cnot3a	81	97.354	ENSLBEG00000017296	cnot3a	64	97.849	Labrus_bergylta
ENSSLDG00000014733	cnot3a	99	66.046	ENSLBEG00000018278	cnot3b	68	91.118	Labrus_bergylta
ENSSLDG00000014733	cnot3a	67	87.138	ENSLACG00000009742	CNOT3	83	88.816	Latimeria_chalumnae
ENSSLDG00000014733	cnot3a	50	94.074	ENSLOCG00000000005	cnot3b	73	92.105	Lepisosteus_oculatus
ENSSLDG00000014733	cnot3a	66	89.542	ENSLAFG00000022133	CNOT3	66	89.836	Loxodonta_africana
ENSSLDG00000014733	cnot3a	66	90.164	ENSMFAG00000040073	CNOT3	80	90.461	Macaca_fascicularis
ENSSLDG00000014733	cnot3a	59	92.857	ENSMMUG00000009698	CNOT3	76	92.857	Macaca_mulatta
ENSSLDG00000014733	cnot3a	66	90.164	ENSMNEG00000036750	CNOT3	80	90.461	Macaca_nemestrina
ENSSLDG00000014733	cnot3a	64	90.164	ENSMLEG00000036579	CNOT3	83	90.461	Mandrillus_leucophaeus
ENSSLDG00000014733	cnot3a	99	95.455	ENSMAMG00000019397	cnot3a	96	95.114	Mastacembelus_armatus
ENSSLDG00000014733	cnot3a	99	94.886	ENSMZEG00005016304	cnot3a	96	94.886	Maylandia_zebra
ENSSLDG00000014733	cnot3a	66	90.492	ENSMAUG00000014996	Cnot3	80	90.789	Mesocricetus_auratus
ENSSLDG00000014733	cnot3a	66	90.164	ENSMICG00000002370	CNOT3	80	90.461	Microcebus_murinus
ENSSLDG00000014733	cnot3a	50	65.533	ENSMOCG00000013249	Cnot3	57	90.789	Microtus_ochrogaster
ENSSLDG00000014733	cnot3a	99	90.465	ENSMMOG00000016446	cnot3a	100	90.083	Mola_mola
ENSSLDG00000014733	cnot3a	58	90.164	ENSMODG00000004066	CNOT3	68	90.461	Monodelphis_domestica
ENSSLDG00000014733	cnot3a	73	77.295	ENSMALG00000004936	cnot3b	65	86.800	Monopterus_albus
ENSSLDG00000014733	cnot3a	100	92.463	ENSMALG00000009204	cnot3a	96	91.591	Monopterus_albus
ENSSLDG00000014733	cnot3a	64	90.647	MGP_CAROLIEiJ_G0029095	Cnot3	100	98.000	Mus_caroli
ENSSLDG00000014733	cnot3a	64	90.647	ENSMUSG00000035632	Cnot3	100	98.000	Mus_musculus
ENSSLDG00000014733	cnot3a	76	74.074	MGP_PahariEiJ_G0020964	Cnot3	100	98.000	Mus_pahari
ENSSLDG00000014733	cnot3a	64	90.647	MGP_SPRETEiJ_G0030148	Cnot3	100	98.000	Mus_spretus
ENSSLDG00000014733	cnot3a	66	89.068	ENSMPUG00000010352	CNOT3	80	90.461	Mustela_putorius_furo
ENSSLDG00000014733	cnot3a	66	90.164	ENSNGAG00000013266	Cnot3	68	90.461	Nannospalax_galili
ENSSLDG00000014733	cnot3a	99	94.890	ENSNBRG00000002401	cnot3a	96	94.890	Neolamprologus_brichardi
ENSSLDG00000014733	cnot3a	77	87.398	ENSNBRG00000003336	cnot3b	81	90.265	Neolamprologus_brichardi
ENSSLDG00000014733	cnot3a	66	90.164	ENSNLEG00000006272	CNOT3	79	90.461	Nomascus_leucogenys
ENSSLDG00000014733	cnot3a	66	90.164	ENSODEG00000000705	CNOT3	81	90.461	Octodon_degus
ENSSLDG00000014733	cnot3a	99	94.665	ENSONIG00000006568	cnot3a	96	94.779	Oreochromis_niloticus
ENSSLDG00000014733	cnot3a	66	90.164	ENSOCUG00000007691	CNOT3	81	90.461	Oryctolagus_cuniculus
ENSSLDG00000014733	cnot3a	99	90.455	ENSORLG00000011174	cnot3a	96	88.409	Oryzias_latipes
ENSSLDG00000014733	cnot3a	99	90.125	ENSORLG00020008009	cnot3a	96	89.217	Oryzias_latipes_hni
ENSSLDG00000014733	cnot3a	99	90.227	ENSORLG00015013729	cnot3a	96	88.864	Oryzias_latipes_hsok
ENSSLDG00000014733	cnot3a	99	90.000	ENSOMEG00000010309	cnot3a	96	89.545	Oryzias_melastigma
ENSSLDG00000014733	cnot3a	61	90.551	ENSOGAG00000006945	CNOT3	80	90.461	Otolemur_garnettii
ENSSLDG00000014733	cnot3a	66	90.164	ENSPPAG00000002748	CNOT3	80	90.461	Pan_paniscus
ENSSLDG00000014733	cnot3a	66	89.068	ENSPPRG00000011705	CNOT3	81	90.461	Panthera_pardus
ENSSLDG00000014733	cnot3a	60	90.604	ENSPTIG00000008781	CNOT3	91	90.604	Panthera_tigris_altaica
ENSSLDG00000014733	cnot3a	66	90.164	ENSPTRG00000011444	CNOT3	80	90.461	Pan_troglodytes
ENSSLDG00000014733	cnot3a	66	90.164	ENSPTRG00000046717	-	80	90.461	Pan_troglodytes
ENSSLDG00000014733	cnot3a	66	90.164	ENSPANG00000009375	CNOT3	80	90.461	Papio_anubis
ENSSLDG00000014733	cnot3a	67	95.299	ENSPKIG00000015967	-	95	89.412	Paramormyrops_kingsleyae
ENSSLDG00000014733	cnot3a	99	66.703	ENSPKIG00000011733	CNOT3	75	57.853	Paramormyrops_kingsleyae
ENSSLDG00000014733	cnot3a	66	90.492	ENSPEMG00000024185	Cnot3	80	90.789	Peromyscus_maniculatus_bairdii
ENSSLDG00000014733	cnot3a	66	89.836	ENSPCIG00000023018	CNOT3	86	90.132	Phascolarctos_cinereus
ENSSLDG00000014733	cnot3a	99	88.776	ENSPFOG00000008693	cnot3a	88	96.689	Poecilia_formosa
ENSSLDG00000014733	cnot3a	99	88.977	ENSPLAG00000013324	cnot3a	96	87.514	Poecilia_latipinna
ENSSLDG00000014733	cnot3a	99	88.649	ENSPMEG00000017718	cnot3a	96	88.422	Poecilia_mexicana
ENSSLDG00000014733	cnot3a	99	86.599	ENSPREG00000007592	cnot3a	95	94.737	Poecilia_reticulata
ENSSLDG00000014733	cnot3a	66	89.836	ENSPPYG00000010372	CNOT3	80	90.132	Pongo_abelii
ENSSLDG00000014733	cnot3a	50	88.372	ENSPCAG00000011999	CNOT3	51	89.803	Procavia_capensis
ENSSLDG00000014733	cnot3a	66	90.164	ENSPCOG00000017673	CNOT3	80	90.461	Propithecus_coquereli
ENSSLDG00000014733	cnot3a	66	88.424	ENSPVAG00000015564	CNOT3	66	89.803	Pteropus_vampyrus
ENSSLDG00000014733	cnot3a	99	94.886	ENSPNYG00000002282	cnot3a	96	94.886	Pundamilia_nyererei
ENSSLDG00000014733	cnot3a	99	75.083	ENSPNAG00000017679	cnot3a	96	74.390	Pygocentrus_nattereri
ENSSLDG00000014733	cnot3a	64	90.647	ENSRNOG00000053234	Cnot3	80	90.789	Rattus_norvegicus
ENSSLDG00000014733	cnot3a	66	90.164	ENSRBIG00000031025	CNOT3	80	90.461	Rhinopithecus_bieti
ENSSLDG00000014733	cnot3a	66	90.164	ENSRROG00000003872	CNOT3	81	90.461	Rhinopithecus_roxellana
ENSSLDG00000014733	cnot3a	79	90.164	ENSSBOG00000030268	CNOT3	80	90.461	Saimiri_boliviensis_boliviensis
ENSSLDG00000014733	cnot3a	99	69.667	ENSSFOG00015000248	cnot3	53	57.752	Scleropages_formosus
ENSSLDG00000014733	cnot3a	99	95.372	ENSSMAG00000013235	cnot3a	97	95.260	Scophthalmus_maximus
ENSSLDG00000014733	cnot3a	99	98.639	ENSSDUG00000008181	cnot3a	96	98.639	Seriola_dumerili
ENSSLDG00000014733	cnot3a	72	89.935	ENSSPUG00000008510	CNOT3	84	90.461	Sphenodon_punctatus
ENSSLDG00000014733	cnot3a	99	96.622	ENSSPAG00000003858	cnot3a	99	96.622	Stegastes_partitus
ENSSLDG00000014733	cnot3a	66	90.164	ENSSSCG00000003264	CNOT3	81	90.461	Sus_scrofa
ENSSLDG00000014733	cnot3a	99	92.168	ENSTRUG00000015732	cnot3a	96	91.487	Takifugu_rubripes
ENSSLDG00000014733	cnot3a	97	87.097	ENSTNIG00000008082	cnot3a	100	86.211	Tetraodon_nigroviridis
ENSSLDG00000014733	cnot3a	66	90.492	ENSUAMG00000005234	CNOT3	81	90.789	Ursus_americanus
ENSSLDG00000014733	cnot3a	59	89.209	ENSUMAG00000010934	CNOT3	83	93.277	Ursus_maritimus
ENSSLDG00000014733	cnot3a	66	90.164	ENSVVUG00000008239	CNOT3	84	90.461	Vulpes_vulpes
ENSSLDG00000014733	cnot3a	67	87.540	ENSXETG00000003166	cnot3	84	89.644	Xenopus_tropicalis
ENSSLDG00000014733	cnot3a	99	85.601	ENSXCOG00000019460	cnot3a	91	98.718	Xiphophorus_couchianus
ENSSLDG00000014733	cnot3a	99	88.068	ENSXMAG00000012273	cnot3a	96	85.925	Xiphophorus_maculatus