EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000014812 (Gene tree)
Gene ID: -
Gene Symbol: rab34b
Alias: si:dkey-220h13.7
Full Name: ras-related protein Rab-34-like
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 3118 bases
Position: chrPEQF01099470.1:69222-72339
Accession: 111647487
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000018845	MMR_HSR1	PF01926.23	7.9e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000019484	-	618	XM_023397105	ENSSLDP00000018845	205 (aa)	XP_023252873	-

Gene Model

Click here to download ENSSLDG00000014812's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000014812's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000014812	rab34b	91	55.263	ENSSLDG00000009464	rab36	71	55.263
ENSSLDG00000014812	rab34b	78	39.623	ENSSLDG00000015823	-	76	39.623
ENSSLDG00000014812	rab34b	74	39.073	ENSSLDG00000010503	rab14	69	39.073
ENSSLDG00000014812	rab34b	58	38.655	ENSSLDG00000011069	rab5aa	55	38.655
ENSSLDG00000014812	rab34b	58	44.538	ENSSLDG00000018942	rab1ab	58	44.538
ENSSLDG00000014812	rab34b	59	35.484	ENSSLDG00000012391	RAB7A	60	35.484
ENSSLDG00000014812	rab34b	73	40.268	ENSSLDG00000015289	-	70	40.268
ENSSLDG00000014812	rab34b	66	38.971	ENSSLDG00000000287	rab23	70	41.497
ENSSLDG00000014812	rab34b	89	74.863	ENSSLDG00000009573	rab34a	69	74.863
ENSSLDG00000014812	rab34b	80	38.182	ENSSLDG00000009068	-	75	38.182
ENSSLDG00000014812	rab34b	57	39.316	ENSSLDG00000005221	rab11ba	53	39.316
ENSSLDG00000014812	rab34b	72	35.811	ENSSLDG00000020354	rab42a	67	35.811
ENSSLDG00000014812	rab34b	73	33.548	ENSSLDG00000004352	-	71	33.548
ENSSLDG00000014812	rab34b	57	40.171	ENSSLDG00000009438	rab11a	54	40.171
ENSSLDG00000014812	rab34b	59	35.484	ENSSLDG00000024959	-	60	35.484
ENSSLDG00000014812	rab34b	73	39.597	ENSSLDG00000022282	rab41	69	39.597
ENSSLDG00000014812	rab34b	60	37.097	ENSSLDG00000009725	-	60	37.097
ENSSLDG00000014812	rab34b	57	39.316	ENSSLDG00000005275	-	53	39.316
ENSSLDG00000014812	rab34b	64	33.588	ENSSLDG00000020918	RAB17	57	33.588
ENSSLDG00000014812	rab34b	57	37.931	ENSSLDG00000006014	rab18b	57	37.931
ENSSLDG00000014812	rab34b	72	40.541	ENSSLDG00000018024	zgc:171927	68	40.541
ENSSLDG00000014812	rab34b	73	35.948	ENSSLDG00000009351	rab9b	74	35.948
ENSSLDG00000014812	rab34b	72	39.474	ENSSLDG00000022533	rab30	71	39.474
ENSSLDG00000014812	rab34b	58	44.538	ENSSLDG00000012251	rab1ba	59	44.538
ENSSLDG00000014812	rab34b	59	38.017	ENSSLDG00000012091	rab25b	58	38.017
ENSSLDG00000014812	rab34b	77	38.509	ENSSLDG00000008070	-	67	38.509
ENSSLDG00000014812	rab34b	57	41.026	ENSSLDG00000012116	rab11al	54	41.026
ENSSLDG00000014812	rab34b	80	38.415	ENSSLDG00000021984	RAB15	74	38.415
ENSSLDG00000014812	rab34b	71	38.356	ENSSLDG00000023317	rab15	67	38.356
ENSSLDG00000014812	rab34b	75	38.065	ENSSLDG00000022004	rab33a	55	38.065
ENSSLDG00000014812	rab34b	72	33.108	ENSSLDG00000020438	rab22a	75	33.108
ENSSLDG00000014812	rab34b	63	39.231	ENSSLDG00000022555	rab2a	61	39.231
ENSSLDG00000014812	rab34b	60	46.400	ENSSLDG00000019214	zgc:101559	53	46.400
ENSSLDG00000014812	rab34b	73	38.255	ENSSLDG00000012474	rab6bb	70	38.255
ENSSLDG00000014812	rab34b	73	38.926	ENSSLDG00000003264	rab6ba	70	38.926
ENSSLDG00000014812	rab34b	59	37.190	ENSSLDG00000006977	rab18a	59	37.190
ENSSLDG00000014812	rab34b	58	44.538	ENSSLDG00000011757	-	60	44.538
ENSSLDG00000014812	rab34b	60	38.400	ENSSLDG00000010880	rab25a	59	38.400
ENSSLDG00000014812	rab34b	73	36.000	ENSSLDG00000002646	si:dkey-34d22.5	68	36.000
ENSSLDG00000014812	rab34b	72	36.000	ENSSLDG00000011597	si:dkey-13a21.4	72	36.000
ENSSLDG00000014812	rab34b	74	39.073	ENSSLDG00000005718	-	69	39.073
ENSSLDG00000014812	rab34b	78	38.750	ENSSLDG00000006360	RAB39B	72	38.750
ENSSLDG00000014812	rab34b	61	42.520	ENSSLDG00000008584	rab33ba	59	42.520
ENSSLDG00000014812	rab34b	58	36.975	ENSSLDG00000017771	rab5c	54	36.975
ENSSLDG00000014812	rab34b	65	38.971	ENSSLDG00000022239	rab12	56	39.416
ENSSLDG00000014812	rab34b	73	36.913	ENSSLDG00000003631	si:dkey-16l2.16	69	36.913
ENSSLDG00000014812	rab34b	57	30.769	ENSSLDG00000025169	rhebl1	63	30.769
ENSSLDG00000014812	rab34b	57	39.316	ENSSLDG00000020676	rab11bb	53	39.316

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000014812	rab34b	88	95.000	ENSAPOG00000019147	rab34b	82	86.628	Acanthochromis_polyacanthus
ENSSLDG00000014812	rab34b	90	79.348	ENSACIG00000004859	rab34b	71	79.348	Amphilophus_citrinellus
ENSSLDG00000014812	rab34b	90	95.652	ENSAOCG00000007106	rab34b	67	95.652	Amphiprion_ocellaris
ENSSLDG00000014812	rab34b	93	93.158	ENSAPEG00000018607	rab34b	68	93.158	Amphiprion_percula
ENSSLDG00000014812	rab34b	94	91.146	ENSATEG00000006851	rab34b	78	91.146	Anabas_testudineus
ENSSLDG00000014812	rab34b	90	94.022	ENSACLG00000005733	rab34b	69	94.022	Astatotilapia_calliptera
ENSSLDG00000014812	rab34b	89	80.328	ENSAMXG00000006018	rab34b	71	80.328	Astyanax_mexicanus
ENSSLDG00000014812	rab34b	90	87.568	ENSCSEG00000018133	rab34b	73	87.568	Cynoglossus_semilaevis
ENSSLDG00000014812	rab34b	90	80.435	ENSDARG00000010977	rab34b	72	79.144	Danio_rerio
ENSSLDG00000014812	rab34b	90	89.674	ENSELUG00000005597	rab34b	71	89.674	Esox_lucius
ENSSLDG00000014812	rab34b	90	92.391	ENSFHEG00000004532	rab34b	72	92.391	Fundulus_heteroclitus
ENSSLDG00000014812	rab34b	75	90.850	ENSGMOG00000007140	rab34b	74	90.850	Gadus_morhua
ENSSLDG00000014812	rab34b	92	93.617	ENSGACG00000020514	rab34b	72	94.022	Gasterosteus_aculeatus
ENSSLDG00000014812	rab34b	89	76.503	ENSIPUG00000024531	rab34	71	76.503	Ictalurus_punctatus
ENSSLDG00000014812	rab34b	90	90.761	ENSKMAG00000019341	rab34b	72	90.761	Kryptolebias_marmoratus
ENSSLDG00000014812	rab34b	92	94.180	ENSLBEG00000027819	rab34b	94	94.180	Labrus_bergylta
ENSSLDG00000014812	rab34b	91	92.513	ENSMAMG00000020214	rab34b	75	92.513	Mastacembelus_armatus
ENSSLDG00000014812	rab34b	90	93.514	ENSMMOG00000010936	rab34b	65	93.514	Mola_mola
ENSSLDG00000014812	rab34b	91	88.172	ENSMALG00000018499	rab34b	70	88.172	Monopterus_albus
ENSSLDG00000014812	rab34b	90	94.565	ENSONIG00000005519	rab34b	72	94.565	Oreochromis_niloticus
ENSSLDG00000014812	rab34b	90	90.761	ENSORLG00000003119	rab34b	67	90.761	Oryzias_latipes
ENSSLDG00000014812	rab34b	90	91.304	ENSORLG00020016139	rab34b	67	91.304	Oryzias_latipes_hni
ENSSLDG00000014812	rab34b	90	91.848	ENSORLG00015000584	rab34b	67	91.848	Oryzias_latipes_hsok
ENSSLDG00000014812	rab34b	90	92.432	ENSOMEG00000010334	rab34b	76	92.432	Oryzias_melastigma
ENSSLDG00000014812	rab34b	90	75.543	ENSPKIG00000013326	rab34b	71	75.543	Paramormyrops_kingsleyae
ENSSLDG00000014812	rab34b	90	91.304	ENSPMGG00000021697	rab34b	72	91.304	Periophthalmus_magnuspinnatus
ENSSLDG00000014812	rab34b	90	93.478	ENSPFOG00000011444	rab34b	72	93.478	Poecilia_formosa
ENSSLDG00000014812	rab34b	90	93.478	ENSPLAG00000005074	rab34b	72	93.478	Poecilia_latipinna
ENSSLDG00000014812	rab34b	90	93.478	ENSPMEG00000013297	rab34b	72	93.478	Poecilia_mexicana
ENSSLDG00000014812	rab34b	90	92.935	ENSPREG00000009813	rab34b	72	92.935	Poecilia_reticulata
ENSSLDG00000014812	rab34b	87	93.855	ENSPNYG00000017153	rab34b	100	93.855	Pundamilia_nyererei
ENSSLDG00000014812	rab34b	89	80.220	ENSPNAG00000015040	rab34b	76	80.220	Pygocentrus_nattereri
ENSSLDG00000014812	rab34b	90	76.630	ENSSFOG00015005188	rab34	93	64.824	Scleropages_formosus
ENSSLDG00000014812	rab34b	90	91.304	ENSSMAG00000019926	rab34b	78	91.209	Scophthalmus_maximus
ENSSLDG00000014812	rab34b	90	100.000	ENSSDUG00000016760	rab34b	58	100.000	Seriola_dumerili
ENSSLDG00000014812	rab34b	90	94.022	ENSSPAG00000002801	rab34b	72	94.022	Stegastes_partitus
ENSSLDG00000014812	rab34b	91	89.305	ENSTRUG00000014481	rab34b	76	89.305	Takifugu_rubripes
ENSSLDG00000014812	rab34b	91	88.770	ENSTNIG00000016158	rab34b	72	88.770	Tetraodon_nigroviridis