EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSLDG00000014816 (Gene tree)
Gene ID: -
Gene Symbol: cnot1
Alias: cdc39-like|im:7141761|kiaa1007l|wu:fc58h04|zgc:152902
Full Name: CCR4-NOT transcription complex subunit 1
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 26561 bases
Position: chrPEQF01099150.1:1757964-1784524
Accession: 111666091
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000018980	Not1	PF04054.15	3.6e-153	1	1
ENSSLDP00000019044	Not1	PF04054.15	3.7e-153	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000019687	-	6939	-	ENSSLDP00000019044	2312 (aa)	-	-
ENSSLDT00000019622	-	11060	XM_023421305	ENSSLDP00000018980	2389 (aa)	XP_023277073	-

Gene Model

Click here to download ENSSLDG00000014816's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000014816's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000014816	cnot1	100	96.914	ENSG00000125107	CNOT1	100	100.000	Homo_sapiens
ENSSLDG00000014816	cnot1	100	98.573	ENSAPOG00000005042	cnot1	100	98.573	Acanthochromis_polyacanthus
ENSSLDG00000014816	cnot1	100	96.914	ENSAMEG00000017298	CNOT1	97	96.914	Ailuropoda_melanoleuca
ENSSLDG00000014816	cnot1	90	98.036	ENSACIG00000016003	cnot1	100	96.660	Amphilophus_citrinellus
ENSSLDG00000014816	cnot1	100	96.445	ENSAPEG00000022342	cnot1	100	96.445	Amphiprion_percula
ENSSLDG00000014816	cnot1	100	98.876	ENSATEG00000012892	cnot1	100	98.876	Anabas_testudineus
ENSSLDG00000014816	cnot1	100	95.938	ENSAPLG00000007162	CNOT1	97	96.919	Anas_platyrhynchos
ENSSLDG00000014816	cnot1	90	95.732	ENSACAG00000001602	CNOT1	95	95.732	Anolis_carolinensis
ENSSLDG00000014816	cnot1	100	89.346	ENSANAG00000038198	CNOT1	100	88.169	Aotus_nancymaae
ENSSLDG00000014816	cnot1	100	96.893	ENSACLG00000014234	cnot1	100	96.893	Astatotilapia_calliptera
ENSSLDG00000014816	cnot1	100	94.772	ENSAMXG00000013170	cnot1	100	94.898	Astyanax_mexicanus
ENSSLDG00000014816	cnot1	100	96.914	ENSBTAG00000020782	CNOT1	100	96.208	Bos_taurus
ENSSLDG00000014816	cnot1	76	44.202	WBGene00002845	let-711	92	54.008	Caenorhabditis_elegans
ENSSLDG00000014816	cnot1	100	96.914	ENSCJAG00000011318	CNOT1	97	96.914	Callithrix_jacchus
ENSSLDG00000014816	cnot1	100	95.961	ENSCAFG00000008426	CNOT1	97	95.961	Canis_familiaris
ENSSLDG00000014816	cnot1	100	94.685	ENSCAFG00020010156	CNOT1	100	93.042	Canis_lupus_dingo
ENSSLDG00000014816	cnot1	100	96.914	ENSCHIG00000010452	CNOT1	97	96.914	Capra_hircus
ENSSLDG00000014816	cnot1	100	96.914	ENSTSYG00000006888	CNOT1	97	96.914	Carlito_syrichta
ENSSLDG00000014816	cnot1	100	97.055	ENSCPOG00000013026	CNOT1	97	97.055	Cavia_porcellus
ENSSLDG00000014816	cnot1	100	96.914	ENSCCAG00000026333	CNOT1	97	96.914	Cebus_capucinus
ENSSLDG00000014816	cnot1	100	96.914	ENSCATG00000032625	CNOT1	97	96.914	Cercocebus_atys
ENSSLDG00000014816	cnot1	100	97.055	ENSCLAG00000006289	CNOT1	97	97.055	Chinchilla_lanigera
ENSSLDG00000014816	cnot1	100	96.914	ENSCSAG00000004731	CNOT1	97	96.914	Chlorocebus_sabaeus
ENSSLDG00000014816	cnot1	80	97.727	ENSCHOG00000009712	CNOT1	83	97.173	Choloepus_hoffmanni
ENSSLDG00000014816	cnot1	98	96.774	ENSCPBG00000026222	CNOT1	98	95.644	Chrysemys_picta_bellii
ENSSLDG00000014816	cnot1	100	58.547	ENSCING00000009149	-	100	57.998	Ciona_intestinalis
ENSSLDG00000014816	cnot1	89	77.159	ENSCSAVG00000002414	-	95	79.470	Ciona_savignyi
ENSSLDG00000014816	cnot1	100	95.972	ENSCANG00000040534	CNOT1	97	95.972	Colobus_angolensis_palliatus
ENSSLDG00000014816	cnot1	100	96.774	ENSCGRG00001016365	Cnot1	97	96.774	Cricetulus_griseus_chok1gshd
ENSSLDG00000014816	cnot1	100	96.774	ENSCGRG00000001714	Cnot1	97	96.774	Cricetulus_griseus_crigri
ENSSLDG00000014816	cnot1	97	99.018	ENSCVAG00000018930	cnot1	100	99.018	Cyprinodon_variegatus
ENSSLDG00000014816	cnot1	100	94.275	ENSDARG00000004174	cnot1	100	93.899	Danio_rerio
ENSSLDG00000014816	cnot1	100	94.118	ENSDNOG00000013250	CNOT1	97	94.118	Dasypus_novemcinctus
ENSSLDG00000014816	cnot1	99	45.835	FBgn0085436	Not1	99	47.760	Drosophila_melanogaster
ENSSLDG00000014816	cnot1	86	94.729	ENSETEG00000012806	CNOT1	84	94.729	Echinops_telfairi
ENSSLDG00000014816	cnot1	83	76.190	ENSEBUG00000011534	cnot1	95	76.190	Eptatretus_burgeri
ENSSLDG00000014816	cnot1	100	96.914	ENSEASG00005005819	CNOT1	100	96.208	Equus_asinus_asinus
ENSSLDG00000014816	cnot1	100	96.914	ENSECAG00000009889	CNOT1	97	96.914	Equus_caballus
ENSSLDG00000014816	cnot1	87	98.667	ENSEEUG00000006015	CNOT1	85	98.667	Erinaceus_europaeus
ENSSLDG00000014816	cnot1	100	96.730	ENSELUG00000014085	cnot1	100	95.449	Esox_lucius
ENSSLDG00000014816	cnot1	100	95.972	ENSFCAG00000025155	CNOT1	97	96.914	Felis_catus
ENSSLDG00000014816	cnot1	100	96.914	ENSFALG00000007285	CNOT1	97	96.914	Ficedula_albicollis
ENSSLDG00000014816	cnot1	100	97.055	ENSFDAG00000013399	CNOT1	97	97.055	Fukomys_damarensis
ENSSLDG00000014816	cnot1	100	95.284	ENSFHEG00000020574	cnot1	100	95.284	Fundulus_heteroclitus
ENSSLDG00000014816	cnot1	90	99.385	ENSGMOG00000012864	cnot1	99	99.385	Gadus_morhua
ENSSLDG00000014816	cnot1	100	96.914	ENSGALG00000002301	CNOT1	97	96.914	Gallus_gallus
ENSSLDG00000014816	cnot1	100	98.878	ENSGAFG00000015005	cnot1	97	98.878	Gambusia_affinis
ENSSLDG00000014816	cnot1	91	97.370	ENSGACG00000002606	cnot1	100	99.394	Gasterosteus_aculeatus
ENSSLDG00000014816	cnot1	100	96.774	ENSGAGG00000022646	CNOT1	97	96.774	Gopherus_agassizii
ENSSLDG00000014816	cnot1	100	96.914	ENSGGOG00000009547	CNOT1	97	96.914	Gorilla_gorilla
ENSSLDG00000014816	cnot1	100	97.189	ENSHBUG00000001729	cnot1	100	97.189	Haplochromis_burtoni
ENSSLDG00000014816	cnot1	100	97.055	ENSHGLG00000014322	CNOT1	97	97.055	Heterocephalus_glaber_female
ENSSLDG00000014816	cnot1	100	96.244	ENSHCOG00000006501	cnot1	100	96.244	Hippocampus_comes
ENSSLDG00000014816	cnot1	100	92.702	ENSIPUG00000011915	cnot1	100	92.702	Ictalurus_punctatus
ENSSLDG00000014816	cnot1	100	97.055	ENSSTOG00000005490	CNOT1	97	97.055	Ictidomys_tridecemlineatus
ENSSLDG00000014816	cnot1	100	96.353	ENSJJAG00000000633	Cnot1	97	96.353	Jaculus_jaculus
ENSSLDG00000014816	cnot1	100	96.696	ENSKMAG00000006149	cnot1	100	96.696	Kryptolebias_marmoratus
ENSSLDG00000014816	cnot1	95	98.603	ENSLBEG00000004740	cnot1	100	98.603	Labrus_bergylta
ENSSLDG00000014816	cnot1	100	96.914	ENSLACG00000010869	CNOT1	99	96.914	Latimeria_chalumnae
ENSSLDG00000014816	cnot1	100	99.299	ENSLOCG00000006324	cnot1	97	99.299	Lepisosteus_oculatus
ENSSLDG00000014816	cnot1	100	96.774	ENSLAFG00000000098	CNOT1	97	96.774	Loxodonta_africana
ENSSLDG00000014816	cnot1	100	96.914	ENSMFAG00000035888	CNOT1	97	96.914	Macaca_fascicularis
ENSSLDG00000014816	cnot1	100	96.914	ENSMMUG00000014625	CNOT1	97	96.914	Macaca_mulatta
ENSSLDG00000014816	cnot1	100	95.972	ENSMNEG00000031820	CNOT1	97	96.914	Macaca_nemestrina
ENSSLDG00000014816	cnot1	100	92.361	ENSMLEG00000040933	CNOT1	100	89.605	Mandrillus_leucophaeus
ENSSLDG00000014816	cnot1	100	94.814	ENSMAMG00000016524	cnot1	100	94.814	Mastacembelus_armatus
ENSSLDG00000014816	cnot1	100	95.080	ENSMZEG00005016210	cnot1	100	95.080	Maylandia_zebra
ENSSLDG00000014816	cnot1	100	96.914	ENSMGAG00000001908	CNOT1	97	96.914	Meleagris_gallopavo
ENSSLDG00000014816	cnot1	100	96.914	ENSMICG00000007071	CNOT1	97	96.914	Microcebus_murinus
ENSSLDG00000014816	cnot1	100	96.774	ENSMOCG00000017969	Cnot1	97	96.774	Microtus_ochrogaster
ENSSLDG00000014816	cnot1	100	97.535	ENSMMOG00000019134	cnot1	100	97.535	Mola_mola
ENSSLDG00000014816	cnot1	100	95.938	ENSMODG00000014199	CNOT1	97	96.919	Monodelphis_domestica
ENSSLDG00000014816	cnot1	100	95.483	ENSMALG00000008645	cnot1	100	95.525	Monopterus_albus
ENSSLDG00000014816	cnot1	98	96.190	MGP_CAROLIEiJ_G0031430	Cnot1	92	96.190	Mus_caroli
ENSSLDG00000014816	cnot1	100	96.774	ENSMUSG00000036550	Cnot1	97	96.774	Mus_musculus
ENSSLDG00000014816	cnot1	100	96.774	MGP_PahariEiJ_G0023028	Cnot1	97	96.774	Mus_pahari
ENSSLDG00000014816	cnot1	100	96.774	MGP_SPRETEiJ_G0032549	Cnot1	97	96.774	Mus_spretus
ENSSLDG00000014816	cnot1	100	96.914	ENSMPUG00000004830	CNOT1	97	96.914	Mustela_putorius_furo
ENSSLDG00000014816	cnot1	100	96.774	ENSMLUG00000003728	CNOT1	97	96.774	Myotis_lucifugus
ENSSLDG00000014816	cnot1	100	96.914	ENSNGAG00000018628	Cnot1	97	96.914	Nannospalax_galili
ENSSLDG00000014816	cnot1	97	96.054	ENSNBRG00000019358	cnot1	100	96.054	Neolamprologus_brichardi
ENSSLDG00000014816	cnot1	100	96.914	ENSNLEG00000003566	CNOT1	97	96.914	Nomascus_leucogenys
ENSSLDG00000014816	cnot1	86	93.065	ENSMEUG00000006145	CNOT1	87	93.065	Notamacropus_eugenii
ENSSLDG00000014816	cnot1	86	97.333	ENSOPRG00000005604	CNOT1	86	97.333	Ochotona_princeps
ENSSLDG00000014816	cnot1	100	97.055	ENSODEG00000016337	CNOT1	97	97.055	Octodon_degus
ENSSLDG00000014816	cnot1	100	96.738	ENSONIG00000007358	cnot1	100	96.738	Oreochromis_niloticus
ENSSLDG00000014816	cnot1	90	96.107	ENSOANG00000012109	CNOT1	97	96.634	Ornithorhynchus_anatinus
ENSSLDG00000014816	cnot1	100	96.914	ENSOCUG00000006911	CNOT1	97	96.914	Oryctolagus_cuniculus
ENSSLDG00000014816	cnot1	100	96.445	ENSORLG00000013734	cnot1	100	96.445	Oryzias_latipes
ENSSLDG00000014816	cnot1	100	94.396	ENSORLG00020017012	cnot1	100	94.396	Oryzias_latipes_hni
ENSSLDG00000014816	cnot1	100	94.270	ENSORLG00015007091	cnot1	100	94.270	Oryzias_latipes_hsok
ENSSLDG00000014816	cnot1	100	94.103	ENSOMEG00000015124	cnot1	100	94.103	Oryzias_melastigma
ENSSLDG00000014816	cnot1	100	96.914	ENSOGAG00000000543	CNOT1	97	96.914	Otolemur_garnettii
ENSSLDG00000014816	cnot1	100	96.914	ENSOARG00000001567	CNOT1	97	96.914	Ovis_aries
ENSSLDG00000014816	cnot1	100	96.914	ENSPPAG00000022013	CNOT1	97	96.914	Pan_paniscus
ENSSLDG00000014816	cnot1	100	96.914	ENSPPRG00000004867	CNOT1	97	96.914	Panthera_pardus
ENSSLDG00000014816	cnot1	100	96.914	ENSPTIG00000012589	CNOT1	97	96.914	Panthera_tigris_altaica
ENSSLDG00000014816	cnot1	100	95.972	ENSPTRG00000008183	CNOT1	97	95.972	Pan_troglodytes
ENSSLDG00000014816	cnot1	100	87.827	ENSPANG00000020901	CNOT1	100	87.708	Papio_anubis
ENSSLDG00000014816	cnot1	99	89.283	ENSPKIG00000002914	CNOT1	99	89.297	Paramormyrops_kingsleyae
ENSSLDG00000014816	cnot1	100	98.317	ENSPKIG00000023538	CNOT1	97	98.317	Paramormyrops_kingsleyae
ENSSLDG00000014816	cnot1	100	96.914	ENSPSIG00000005499	CNOT1	97	96.914	Pelodiscus_sinensis
ENSSLDG00000014816	cnot1	100	79.482	ENSPMAG00000009381	cnot1	100	79.358	Petromyzon_marinus
ENSSLDG00000014816	cnot1	100	97.055	ENSPCIG00000007343	CNOT1	100	96.407	Phascolarctos_cinereus
ENSSLDG00000014816	cnot1	99	95.733	ENSPFOG00000003497	cnot1	100	95.733	Poecilia_formosa
ENSSLDG00000014816	cnot1	95	98.004	ENSPLAG00000014018	cnot1	100	98.004	Poecilia_latipinna
ENSSLDG00000014816	cnot1	95	98.004	ENSPMEG00000005868	cnot1	100	98.004	Poecilia_mexicana
ENSSLDG00000014816	cnot1	95	98.004	ENSPREG00000018793	cnot1	100	98.004	Poecilia_reticulata
ENSSLDG00000014816	cnot1	100	96.914	ENSPPYG00000007410	CNOT1	97	96.914	Pongo_abelii
ENSSLDG00000014816	cnot1	88	93.662	ENSPCAG00000003241	CNOT1	86	93.662	Procavia_capensis
ENSSLDG00000014816	cnot1	100	95.972	ENSPCOG00000027139	CNOT1	97	95.972	Propithecus_coquereli
ENSSLDG00000014816	cnot1	100	89.621	ENSPVAG00000004243	CNOT1	100	88.449	Pteropus_vampyrus
ENSSLDG00000014816	cnot1	100	97.145	ENSPNYG00000012919	cnot1	100	97.145	Pundamilia_nyererei
ENSSLDG00000014816	cnot1	100	93.434	ENSPNAG00000000246	cnot1	100	93.434	Pygocentrus_nattereri
ENSSLDG00000014816	cnot1	100	96.634	ENSRNOG00000012271	Cnot1	97	96.634	Rattus_norvegicus
ENSSLDG00000014816	cnot1	100	95.972	ENSRBIG00000044598	CNOT1	97	95.972	Rhinopithecus_bieti
ENSSLDG00000014816	cnot1	100	96.914	ENSRROG00000000906	CNOT1	97	96.914	Rhinopithecus_roxellana
ENSSLDG00000014816	cnot1	51	39.207	YCR093W	CDC39	61	34.074	Saccharomyces_cerevisiae
ENSSLDG00000014816	cnot1	100	92.149	ENSSBOG00000029155	CNOT1	97	92.149	Saimiri_boliviensis_boliviensis
ENSSLDG00000014816	cnot1	100	97.055	ENSSHAG00000012187	CNOT1	97	97.055	Sarcophilus_harrisii
ENSSLDG00000014816	cnot1	100	93.412	ENSSFOG00015017614	cnot1	100	92.446	Scleropages_formosus
ENSSLDG00000014816	cnot1	100	98.423	ENSSMAG00000013844	cnot1	100	98.423	Scophthalmus_maximus
ENSSLDG00000014816	cnot1	100	99.611	ENSSDUG00000021491	cnot1	100	99.611	Seriola_dumerili
ENSSLDG00000014816	cnot1	86	97.600	ENSSARG00000000762	CNOT1	88	97.600	Sorex_araneus
ENSSLDG00000014816	cnot1	100	96.320	ENSSPAG00000018802	cnot1	100	96.403	Stegastes_partitus
ENSSLDG00000014816	cnot1	100	96.774	ENSSSCG00000002799	CNOT1	100	96.208	Sus_scrofa
ENSSLDG00000014816	cnot1	100	96.914	ENSTGUG00000005919	CNOT1	97	96.914	Taeniopygia_guttata
ENSSLDG00000014816	cnot1	100	99.018	ENSTNIG00000018706	cnot1	97	99.018	Tetraodon_nigroviridis
ENSSLDG00000014816	cnot1	79	97.887	ENSTBEG00000000720	CNOT1	80	95.862	Tupaia_belangeri
ENSSLDG00000014816	cnot1	95	96.914	ENSTTRG00000008460	CNOT1	92	96.914	Tursiops_truncatus
ENSSLDG00000014816	cnot1	100	96.914	ENSUAMG00000009251	CNOT1	97	96.914	Ursus_americanus
ENSSLDG00000014816	cnot1	100	96.914	ENSUMAG00000021291	CNOT1	97	96.914	Ursus_maritimus
ENSSLDG00000014816	cnot1	97	93.548	ENSVPAG00000008846	CNOT1	97	92.416	Vicugna_pacos
ENSSLDG00000014816	cnot1	100	94.685	ENSVVUG00000024037	CNOT1	100	93.042	Vulpes_vulpes
ENSSLDG00000014816	cnot1	100	89.216	ENSXETG00000015900	cnot1	97	89.216	Xenopus_tropicalis
ENSSLDG00000014816	cnot1	100	94.105	ENSXCOG00000013552	cnot1	100	94.105	Xiphophorus_couchianus
ENSSLDG00000014816	cnot1	100	94.147	ENSXMAG00000006031	cnot1	100	94.147	Xiphophorus_maculatus