EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSLDG00000015130 (Gene tree)
Gene ID: -
Gene Symbol: srrm4
Alias: ZnSR100|im:7136231|si:dkey-1k23.1
Full Name: serine/arginine repetitive matrix 4
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 59989 bases
Position: chrPEQF01099051.1:401192-461180
Accession: ZDB-GENE-050208-34
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000019300	SRRM_C	PF15230.6	3.4e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000019948	-	1356	-	ENSSLDP00000019300	451 (aa)	-	-

Gene Model

Click here to download ENSSLDG00000015130's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000015130's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000015130	srrm4	99	65.256	ENSACIG00000002171	srrm4	96	65.198	Amphilophus_citrinellus
ENSSLDG00000015130	srrm4	77	75.862	ENSACLG00000023532	srrm4	98	68.547	Astatotilapia_calliptera
ENSSLDG00000015130	srrm4	77	70.588	ENSELUG00000004986	srrm4	67	68.750	Esox_lucius
ENSSLDG00000015130	srrm4	79	69.101	ENSFHEG00000005091	srrm4	89	67.135	Fundulus_heteroclitus
ENSSLDG00000015130	srrm4	82	42.711	ENSGMOG00000006714	srrm4	63	48.968	Gadus_morhua
ENSSLDG00000015130	srrm4	97	60.085	ENSGAFG00000006706	srrm4	81	97.222	Gambusia_affinis
ENSSLDG00000015130	srrm4	99	70.110	ENSMAMG00000004280	srrm4	100	69.231	Mastacembelus_armatus
ENSSLDG00000015130	srrm4	77	75.862	ENSMZEG00005021733	srrm4	98	68.547	Maylandia_zebra
ENSSLDG00000015130	srrm4	97	65.401	ENSMMOG00000000228	srrm4	99	63.713	Mola_mola
ENSSLDG00000015130	srrm4	77	72.622	ENSNBRG00000015313	srrm4	84	72.622	Neolamprologus_brichardi
ENSSLDG00000015130	srrm4	75	68.800	ENSONIG00000010552	srrm4	66	77.083	Oreochromis_niloticus
ENSSLDG00000015130	srrm4	78	75.362	ENSORLG00020009749	srrm4	96	52.092	Oryzias_latipes_hni
ENSSLDG00000015130	srrm4	97	57.237	ENSPMGG00000008387	srrm4	95	57.237	Periophthalmus_magnuspinnatus
ENSSLDG00000015130	srrm4	77	67.109	ENSPFOG00000014600	srrm4	99	67.857	Poecilia_formosa
ENSSLDG00000015130	srrm4	97	65.247	ENSPLAG00000002006	srrm4	99	64.574	Poecilia_latipinna
ENSSLDG00000015130	srrm4	97	65.376	ENSPMEG00000017802	srrm4	99	65.000	Poecilia_mexicana
ENSSLDG00000015130	srrm4	77	75.793	ENSPNYG00000007785	srrm4	74	77.233	Pundamilia_nyererei
ENSSLDG00000015130	srrm4	97	66.808	ENSSMAG00000012257	srrm4	99	67.230	Scophthalmus_maximus
ENSSLDG00000015130	srrm4	98	90.749	ENSSDUG00000017519	srrm4	100	87.912	Seriola_dumerili
ENSSLDG00000015130	srrm4	98	67.742	ENSSPAG00000016190	srrm4	99	81.556	Stegastes_partitus
ENSSLDG00000015130	srrm4	86	97.436	ENSXMAG00000002658	srrm4	64	85.106	Xiphophorus_maculatus