EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSLDG00000015199 (Gene tree)
Gene ID: -
Gene Symbol: bms1
Alias: bms1l|im:7152071|wu:fb37d08
Full Name: BMS1%2C ribosome biogenesis factor
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 17733 bases
Position: chrPEQF01099064.1:636652-654384
Accession: 111664380
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000019382	AARP2CN	PF08142.12	8.1e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000020031	-	4547	XM_023418946	ENSSLDP00000019382	1234 (aa)	XP_023274714	UPI000C6FC443

Gene Model

Click here to download ENSSLDG00000015199's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000015199's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000015199	bms1	53	66.922	ENSG00000165733	BMS1	83	70.000	Homo_sapiens
ENSSLDG00000015199	bms1	88	83.533	ENSAPOG00000002296	bms1	100	84.022	Acanthochromis_polyacanthus
ENSSLDG00000015199	bms1	100	76.485	ENSACIG00000002588	bms1	99	77.607	Amphilophus_citrinellus
ENSSLDG00000015199	bms1	100	84.770	ENSAOCG00000018088	bms1	100	84.219	Amphiprion_ocellaris
ENSSLDG00000015199	bms1	100	84.355	ENSAPEG00000014673	bms1	100	84.206	Amphiprion_percula
ENSSLDG00000015199	bms1	100	85.346	ENSATEG00000023465	bms1	100	85.149	Anabas_testudineus
ENSSLDG00000015199	bms1	53	66.018	ENSACAG00000004537	-	89	68.943	Anolis_carolinensis
ENSSLDG00000015199	bms1	52	66.047	ENSANAG00000023432	BMS1	83	70.217	Aotus_nancymaae
ENSSLDG00000015199	bms1	100	81.634	ENSACLG00000001294	bms1	100	80.744	Astatotilapia_calliptera
ENSSLDG00000015199	bms1	82	52.826	WBGene00022021	Y61A9LA.10	96	53.012	Caenorhabditis_elegans
ENSSLDG00000015199	bms1	53	66.362	ENSCAFG00000007114	BMS1	88	68.710	Canis_familiaris
ENSSLDG00000015199	bms1	53	66.362	ENSCAFG00020025282	BMS1	88	68.710	Canis_lupus_dingo
ENSSLDG00000015199	bms1	99	57.927	ENSCAPG00000008652	BMS1	83	69.099	Cavia_aperea
ENSSLDG00000015199	bms1	99	60.837	ENSCPOG00000000502	BMS1	84	70.386	Cavia_porcellus
ENSSLDG00000015199	bms1	99	61.246	ENSCHOG00000011055	BMS1	88	68.882	Choloepus_hoffmanni
ENSSLDG00000015199	bms1	98	61.376	ENSCPBG00000025581	BMS1	86	69.044	Chrysemys_picta_bellii
ENSSLDG00000015199	bms1	81	62.469	ENSCING00000003181	-	97	60.526	Ciona_intestinalis
ENSSLDG00000015199	bms1	71	54.353	ENSCSAVG00000004113	-	72	71.304	Ciona_savignyi
ENSSLDG00000015199	bms1	52	67.183	ENSCANG00000011609	BMS1	89	69.094	Colobus_angolensis_palliatus
ENSSLDG00000015199	bms1	98	61.295	ENSCGRG00001019461	Bms1	90	68.226	Cricetulus_griseus_chok1gshd
ENSSLDG00000015199	bms1	98	61.295	ENSCGRG00000009016	Bms1	90	68.226	Cricetulus_griseus_crigri
ENSSLDG00000015199	bms1	100	77.902	ENSCSEG00000002469	bms1	50	82.419	Cynoglossus_semilaevis
ENSSLDG00000015199	bms1	100	79.049	ENSCVAG00000008371	bms1	100	80.178	Cyprinodon_variegatus
ENSSLDG00000015199	bms1	99	71.553	ENSDARG00000054154	bms1	99	71.815	Danio_rerio
ENSSLDG00000015199	bms1	99	60.955	ENSDNOG00000015761	BMS1	88	69.044	Dasypus_novemcinctus
ENSSLDG00000015199	bms1	92	55.136	FBgn0036686	CG7728	94	55.650	Drosophila_melanogaster
ENSSLDG00000015199	bms1	99	61.251	ENSECAG00000001358	BMS1	88	64.506	Equus_caballus
ENSSLDG00000015199	bms1	99	72.997	ENSELUG00000001756	bms1	75	89.835	Esox_lucius
ENSSLDG00000015199	bms1	94	70.048	ENSFALG00000006882	BMS1	86	69.649	Ficedula_albicollis
ENSSLDG00000015199	bms1	100	80.308	ENSFHEG00000003367	bms1	100	79.254	Fundulus_heteroclitus
ENSSLDG00000015199	bms1	59	59.169	ENSGALG00000002624	BMS1	87	70.161	Gallus_gallus
ENSSLDG00000015199	bms1	99	85.714	ENSGACG00000015334	bms1	89	85.233	Gasterosteus_aculeatus
ENSSLDG00000015199	bms1	98	62.767	ENSGAGG00000003467	BMS1	87	68.720	Gopherus_agassizii
ENSSLDG00000015199	bms1	100	81.472	ENSHBUG00000022628	bms1	100	80.663	Haplochromis_burtoni
ENSSLDG00000015199	bms1	99	78.990	ENSHCOG00000017604	bms1	99	78.110	Hippocampus_comes
ENSSLDG00000015199	bms1	99	72.541	ENSIPUG00000017855	bms1	100	72.569	Ictalurus_punctatus
ENSSLDG00000015199	bms1	99	60.682	ENSSTOG00000015063	BMS1	88	69.318	Ictidomys_tridecemlineatus
ENSSLDG00000015199	bms1	66	74.296	ENSKMAG00000021982	bms1	97	73.620	Kryptolebias_marmoratus
ENSSLDG00000015199	bms1	100	78.072	ENSLBEG00000028208	bms1	100	78.956	Labrus_bergylta
ENSSLDG00000015199	bms1	53	75.569	ENSLOCG00000012914	bms1	99	71.224	Lepisosteus_oculatus
ENSSLDG00000015199	bms1	87	66.353	ENSMFAG00000037771	BMS1	96	66.165	Macaca_fascicularis
ENSSLDG00000015199	bms1	100	83.428	ENSMAMG00000020855	bms1	100	82.538	Mastacembelus_armatus
ENSSLDG00000015199	bms1	100	81.634	ENSMZEG00005005663	bms1	100	80.744	Maylandia_zebra
ENSSLDG00000015199	bms1	94	64.438	ENSMGAG00000001170	BMS1	87	70.000	Meleagris_gallopavo
ENSSLDG00000015199	bms1	58	58.333	ENSMAUG00000002195	Bms1	89	67.903	Mesocricetus_auratus
ENSSLDG00000015199	bms1	99	60.769	ENSMICG00000009977	BMS1	83	69.017	Microcebus_murinus
ENSSLDG00000015199	bms1	98	60.290	ENSMOCG00000002038	Bms1	88	68.123	Microtus_ochrogaster
ENSSLDG00000015199	bms1	100	81.524	ENSMMOG00000000977	bms1	100	81.037	Mola_mola
ENSSLDG00000015199	bms1	54	62.341	ENSMODG00000001177	BMS1	87	69.823	Monodelphis_domestica
ENSSLDG00000015199	bms1	100	84.087	ENSMALG00000009680	bms1	100	83.845	Monopterus_albus
ENSSLDG00000015199	bms1	68	77.872	MGP_CAROLIEiJ_G0028785	-	62	78.205	Mus_caroli
ENSSLDG00000015199	bms1	53	65.257	MGP_PahariEiJ_G0022539	Bms1	88	67.524	Mus_pahari
ENSSLDG00000015199	bms1	99	60.896	ENSMLUG00000003260	BMS1	88	68.994	Myotis_lucifugus
ENSSLDG00000015199	bms1	99	55.950	ENSNGAG00000015258	Bms1	87	69.094	Nannospalax_galili
ENSSLDG00000015199	bms1	83	76.098	ENSOPRG00000005195	BMS1	80	75.980	Ochotona_princeps
ENSSLDG00000015199	bms1	99	60.168	ENSODEG00000005554	BMS1	83	69.807	Octodon_degus
ENSSLDG00000015199	bms1	100	82.429	ENSONIG00000007227	bms1	100	80.972	Oreochromis_niloticus
ENSSLDG00000015199	bms1	99	60.896	ENSOANG00000000662	-	88	68.810	Ornithorhynchus_anatinus
ENSSLDG00000015199	bms1	100	80.794	ENSORLG00000014655	bms1	100	80.065	Oryzias_latipes
ENSSLDG00000015199	bms1	100	77.893	ENSORLG00020016246	bms1	82	78.598	Oryzias_latipes_hni
ENSSLDG00000015199	bms1	100	78.732	ENSORLG00015014183	bms1	92	77.345	Oryzias_latipes_hsok
ENSSLDG00000015199	bms1	100	77.637	ENSOMEG00000015042	bms1	100	80.065	Oryzias_melastigma
ENSSLDG00000015199	bms1	53	67.228	ENSPTRG00000002441	BMS1	83	70.065	Pan_troglodytes
ENSSLDG00000015199	bms1	99	60.437	ENSPSIG00000006481	BMS1	85	67.308	Pelodiscus_sinensis
ENSSLDG00000015199	bms1	96	67.802	ENSPCIG00000001339	BMS1	85	72.958	Phascolarctos_cinereus
ENSSLDG00000015199	bms1	99	73.071	ENSPFOG00000015180	bms1	99	77.215	Poecilia_formosa
ENSSLDG00000015199	bms1	99	78.462	ENSPMEG00000023176	bms1	94	78.300	Poecilia_mexicana
ENSSLDG00000015199	bms1	59	78.237	ENSPREG00000002695	bms1	99	78.264	Poecilia_reticulata
ENSSLDG00000015199	bms1	66	73.469	ENSPCAG00000014528	BMS1	71	69.848	Procavia_capensis
ENSSLDG00000015199	bms1	100	80.145	ENSPNYG00000018866	bms1	91	80.462	Pundamilia_nyererei
ENSSLDG00000015199	bms1	99	71.262	ENSPNAG00000000676	bms1	90	80.998	Pygocentrus_nattereri
ENSSLDG00000015199	bms1	81	58.807	ENSRNOG00000006576	Bms1	86	70.649	Rattus_norvegicus
ENSSLDG00000015199	bms1	73	48.140	YPL217C	-	80	47.702	Saccharomyces_cerevisiae
ENSSLDG00000015199	bms1	99	65.468	ENSSHAG00000005062	BMS1	87	69.256	Sarcophilus_harrisii
ENSSLDG00000015199	bms1	100	85.000	ENSSMAG00000019966	bms1	100	85.393	Scophthalmus_maximus
ENSSLDG00000015199	bms1	100	96.688	ENSSDUG00000016875	bms1	100	96.688	Seriola_dumerili
ENSSLDG00000015199	bms1	50	73.000	ENSSARG00000014407	BMS1	66	73.000	Sorex_araneus
ENSSLDG00000015199	bms1	50	69.243	ENSSPUG00000014454	BMS1	83	71.030	Sphenodon_punctatus
ENSSLDG00000015199	bms1	94	70.598	ENSTGUG00000006302	-	87	69.726	Taeniopygia_guttata
ENSSLDG00000015199	bms1	99	71.232	ENSTRUG00000008028	bms1	99	72.204	Takifugu_rubripes
ENSSLDG00000015199	bms1	99	75.201	ENSTNIG00000006216	bms1	89	75.444	Tetraodon_nigroviridis
ENSSLDG00000015199	bms1	63	72.148	ENSTBEG00000001673	-	63	72.881	Tupaia_belangeri
ENSSLDG00000015199	bms1	99	62.655	ENSVVUG00000021305	BMS1	88	68.710	Vulpes_vulpes
ENSSLDG00000015199	bms1	98	61.429	ENSXETG00000008158	bms1	90	63.419	Xenopus_tropicalis
ENSSLDG00000015199	bms1	99	76.849	ENSXCOG00000000506	bms1	96	90.196	Xiphophorus_couchianus
ENSSLDG00000015199	bms1	99	78.345	ENSXMAG00000014236	bms1	99	78.508	Xiphophorus_maculatus