EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000015312 (Gene tree)
Gene ID: -
Gene Symbol: ddx4
Alias: vas|vasa|vlg|wu:fi24g05|zgc:109812|zgc:158535
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 4
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 6218 bases
Position: chrPEQF01099329.1:2940586-2946803
Accession: ZDB-GENE-990415-272
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000019706	DEAD	PF00270.29	1.6e-43	1	1
ENSSLDP00000019641	DEAD	PF00270.29	1.7e-43	1	1
ENSSLDP00000019672	DEAD	PF00270.29	2e-43	1	1
ENSSLDP00000019685	DEAD	PF00270.29	3.2e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000020332	-	1299	-	ENSSLDP00000019672	432 (aa)	-	-
ENSSLDT00000020301	-	1203	-	ENSSLDP00000019641	400 (aa)	-	-
ENSSLDT00000020369	-	1188	-	ENSSLDP00000019706	395 (aa)	-	-
ENSSLDT00000020345	-	1215	-	ENSSLDP00000019685	404 (aa)	-	-

Gene Model

Click here to download ENSSLDG00000015312's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000015312's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000015312	ddx4	86	40.407	ENSSLDG00000024131	ddx5	54	40.407
ENSSLDG00000015312	ddx4	88	39.773	ENSSLDG00000024923	-	61	36.713
ENSSLDG00000015312	ddx4	94	32.540	ENSSLDG00000018142	ddx47	69	32.869
ENSSLDG00000015312	ddx4	86	30.725	ENSSLDG00000015202	eif4a2	80	30.725
ENSSLDG00000015312	ddx4	76	30.492	ENSSLDG00000011941	eif4a1b	77	31.003
ENSSLDG00000015312	ddx4	86	40.698	ENSSLDG00000003614	DDX5	60	38.817
ENSSLDG00000015312	ddx4	77	35.390	ENSSLDG00000010112	eif4a3	75	35.390
ENSSLDG00000015312	ddx4	88	40.793	ENSSLDG00000008526	-	61	39.024
ENSSLDG00000015312	ddx4	88	38.968	ENSSLDG00000017225	ddx43	51	37.838
ENSSLDG00000015312	ddx4	52	31.429	ENSSLDG00000011566	-	88	31.429
ENSSLDG00000015312	ddx4	94	54.707	ENSSLDG00000018297	-	62	52.451
ENSSLDG00000015312	ddx4	87	39.143	ENSSLDG00000010264	DDX41	53	39.143
ENSSLDG00000015312	ddx4	82	32.012	ENSSLDG00000003692	ddx18	56	32.012
ENSSLDG00000015312	ddx4	91	31.694	ENSSLDG00000006958	ddx49	73	31.694
ENSSLDG00000015312	ddx4	80	30.031	ENSSLDG00000007608	-	61	30.031
ENSSLDG00000015312	ddx4	87	31.161	ENSSLDG00000016999	ddx52	59	31.161
ENSSLDG00000015312	ddx4	88	57.182	ENSSLDG00000002762	-	53	54.617
ENSSLDG00000015312	ddx4	82	35.758	ENSSLDG00000025665	ddx21	51	35.758
ENSSLDG00000015312	ddx4	83	30.838	ENSSLDG00000006167	ddx6	65	30.514

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000015312	ddx4	100	69.424	ENSG00000152670	DDX4	69	69.424	Homo_sapiens
ENSSLDG00000015312	ddx4	100	79.198	ENSAPOG00000021394	ddx4	100	79.699	Acanthochromis_polyacanthus
ENSSLDG00000015312	ddx4	100	69.674	ENSAMEG00000013960	DDX4	55	69.674	Ailuropoda_melanoleuca
ENSSLDG00000015312	ddx4	100	85.930	ENSACIG00000017623	ddx4	100	85.930	Amphilophus_citrinellus
ENSSLDG00000015312	ddx4	100	86.466	ENSAPEG00000008490	ddx4	100	86.466	Amphiprion_percula
ENSSLDG00000015312	ddx4	100	88.945	ENSATEG00000011704	ddx4	100	88.945	Anabas_testudineus
ENSSLDG00000015312	ddx4	90	70.986	ENSAPLG00000011662	DDX4	80	70.986	Anas_platyrhynchos
ENSSLDG00000015312	ddx4	100	69.095	ENSACAG00000014951	DDX4	57	69.095	Anolis_carolinensis
ENSSLDG00000015312	ddx4	100	70.677	ENSANAG00000029060	DDX4	57	70.677	Aotus_nancymaae
ENSSLDG00000015312	ddx4	100	85.427	ENSACLG00000007422	ddx4	66	85.427	Astatotilapia_calliptera
ENSSLDG00000015312	ddx4	100	80.149	ENSAMXG00000010288	ddx4	61	80.149	Astyanax_mexicanus
ENSSLDG00000015312	ddx4	100	69.674	ENSBTAG00000008871	DDX4	59	69.674	Bos_taurus
ENSSLDG00000015312	ddx4	90	45.405	WBGene00001600	glh-3	51	45.405	Caenorhabditis_elegans
ENSSLDG00000015312	ddx4	100	69.424	ENSCJAG00000001951	DDX4	69	69.424	Callithrix_jacchus
ENSSLDG00000015312	ddx4	100	69.424	ENSCAFG00000006875	DDX4	55	69.424	Canis_familiaris
ENSSLDG00000015312	ddx4	100	69.424	ENSCAFG00020024295	DDX4	61	69.424	Canis_lupus_dingo
ENSSLDG00000015312	ddx4	100	69.173	ENSCHIG00000015567	DDX4	56	69.173	Capra_hircus
ENSSLDG00000015312	ddx4	100	69.925	ENSTSYG00000011848	DDX4	69	69.925	Carlito_syrichta
ENSSLDG00000015312	ddx4	98	61.282	ENSCPOG00000004327	DDX4	59	61.282	Cavia_porcellus
ENSSLDG00000015312	ddx4	100	70.426	ENSCCAG00000028725	DDX4	57	70.426	Cebus_capucinus
ENSSLDG00000015312	ddx4	100	69.674	ENSCATG00000044303	DDX4	69	69.674	Cercocebus_atys
ENSSLDG00000015312	ddx4	100	68.421	ENSCLAG00000005386	DDX4	57	68.421	Chinchilla_lanigera
ENSSLDG00000015312	ddx4	100	69.424	ENSCSAG00000016336	DDX4	54	69.424	Chlorocebus_sabaeus
ENSSLDG00000015312	ddx4	100	62.657	ENSCHOG00000000200	DDX4	56	62.657	Choloepus_hoffmanni
ENSSLDG00000015312	ddx4	100	68.593	ENSCPBG00000026547	DDX4	68	68.593	Chrysemys_picta_bellii
ENSSLDG00000015312	ddx4	94	61.968	ENSCING00000001412	-	66	59.645	Ciona_intestinalis
ENSSLDG00000015312	ddx4	93	64.324	ENSCSAVG00000004304	-	59	64.075	Ciona_savignyi
ENSSLDG00000015312	ddx4	100	60.652	ENSCANG00000003129	DDX4	66	60.652	Colobus_angolensis_palliatus
ENSSLDG00000015312	ddx4	100	69.000	ENSCGRG00001014961	Ddx4	57	69.000	Cricetulus_griseus_chok1gshd
ENSSLDG00000015312	ddx4	100	69.000	ENSCGRG00000001251	Ddx4	57	69.000	Cricetulus_griseus_crigri
ENSSLDG00000015312	ddx4	96	76.302	ENSCSEG00000006039	ddx4	59	74.250	Cynoglossus_semilaevis
ENSSLDG00000015312	ddx4	100	77.805	ENSDARG00000014373	ddx4	58	77.363	Danio_rerio
ENSSLDG00000015312	ddx4	100	68.579	ENSDNOG00000011658	DDX4	58	68.579	Dasypus_novemcinctus
ENSSLDG00000015312	ddx4	100	68.672	ENSDORG00000012201	Ddx4	57	68.672	Dipodomys_ordii
ENSSLDG00000015312	ddx4	93	56.011	FBgn0283442	vas	54	56.011	Drosophila_melanogaster
ENSSLDG00000015312	ddx4	85	56.196	ENSEBUG00000003290	-	69	56.196	Eptatretus_burgeri
ENSSLDG00000015312	ddx4	100	69.424	ENSEASG00005012143	DDX4	62	69.424	Equus_asinus_asinus
ENSSLDG00000015312	ddx4	100	69.424	ENSECAG00000023616	DDX4	62	69.424	Equus_caballus
ENSSLDG00000015312	ddx4	100	82.500	ENSELUG00000017328	ddx4	62	82.500	Esox_lucius
ENSSLDG00000015312	ddx4	100	69.424	ENSFCAG00000012560	DDX4	69	69.424	Felis_catus
ENSSLDG00000015312	ddx4	100	69.173	ENSFDAG00000003703	DDX4	57	69.173	Fukomys_damarensis
ENSSLDG00000015312	ddx4	100	84.171	ENSFHEG00000019935	ddx4	63	84.171	Fundulus_heteroclitus
ENSSLDG00000015312	ddx4	87	69.275	ENSGALG00000014713	DDX4	52	69.275	Gallus_gallus
ENSSLDG00000015312	ddx4	100	86.398	ENSGAFG00000016509	ddx4	62	86.398	Gambusia_affinis
ENSSLDG00000015312	ddx4	100	84.962	ENSGACG00000015323	ddx4	82	84.962	Gasterosteus_aculeatus
ENSSLDG00000015312	ddx4	63	59.677	ENSGAGG00000007953	-	88	59.677	Gopherus_agassizii
ENSSLDG00000015312	ddx4	100	69.424	ENSGGOG00000002439	DDX4	69	69.424	Gorilla_gorilla
ENSSLDG00000015312	ddx4	100	85.678	ENSHBUG00000001897	ddx4	67	85.678	Haplochromis_burtoni
ENSSLDG00000015312	ddx4	100	60.401	ENSHGLG00000003594	DDX4	54	60.401	Heterocephalus_glaber_female
ENSSLDG00000015312	ddx4	100	80.952	ENSHCOG00000018337	ddx4	66	80.952	Hippocampus_comes
ENSSLDG00000015312	ddx4	100	79.950	ENSIPUG00000001845	ddx4	65	79.950	Ictalurus_punctatus
ENSSLDG00000015312	ddx4	100	69.000	ENSSTOG00000021044	DDX4	57	69.000	Ictidomys_tridecemlineatus
ENSSLDG00000015312	ddx4	100	69.250	ENSJJAG00000015867	Ddx4	57	69.250	Jaculus_jaculus
ENSSLDG00000015312	ddx4	97	88.342	ENSKMAG00000012439	ddx4	62	86.318	Kryptolebias_marmoratus
ENSSLDG00000015312	ddx4	100	87.595	ENSLBEG00000019504	ddx4	61	87.595	Labrus_bergylta
ENSSLDG00000015312	ddx4	100	76.884	ENSLOCG00000010887	ddx4	82	76.884	Lepisosteus_oculatus
ENSSLDG00000015312	ddx4	100	69.674	ENSLAFG00000005900	DDX4	57	69.674	Loxodonta_africana
ENSSLDG00000015312	ddx4	100	69.674	ENSMFAG00000040186	DDX4	69	69.674	Macaca_fascicularis
ENSSLDG00000015312	ddx4	100	69.674	ENSMMUG00000017386	DDX4	69	69.674	Macaca_mulatta
ENSSLDG00000015312	ddx4	100	69.674	ENSMNEG00000033343	DDX4	69	69.674	Macaca_nemestrina
ENSSLDG00000015312	ddx4	93	64.420	ENSMLEG00000038233	DDX4	65	64.420	Mandrillus_leucophaeus
ENSSLDG00000015312	ddx4	100	86.582	ENSMAMG00000003574	ddx4	100	86.582	Mastacembelus_armatus
ENSSLDG00000015312	ddx4	100	85.427	ENSMZEG00005019116	ddx4	69	85.427	Maylandia_zebra
ENSSLDG00000015312	ddx4	100	61.250	ENSMAUG00000019873	Ddx4	53	66.763	Mesocricetus_auratus
ENSSLDG00000015312	ddx4	100	69.250	ENSMICG00000008994	-	69	69.250	Microcebus_murinus
ENSSLDG00000015312	ddx4	99	55.276	ENSMICG00000028132	-	62	55.779	Microcebus_murinus
ENSSLDG00000015312	ddx4	100	68.000	ENSMOCG00000013250	Ddx4	57	68.000	Microtus_ochrogaster
ENSSLDG00000015312	ddx4	100	83.417	ENSMMOG00000004689	ddx4	71	83.417	Mola_mola
ENSSLDG00000015312	ddx4	100	68.750	ENSMODG00000019511	DDX4	55	68.750	Monodelphis_domestica
ENSSLDG00000015312	ddx4	53	90.047	ENSMALG00000002923	ddx4	97	72.242	Monopterus_albus
ENSSLDG00000015312	ddx4	100	68.159	MGP_CAROLIEiJ_G0018893	Ddx4	57	68.159	Mus_caroli
ENSSLDG00000015312	ddx4	100	68.657	ENSMUSG00000021758	Ddx4	57	68.657	Mus_musculus
ENSSLDG00000015312	ddx4	100	68.080	MGP_PahariEiJ_G0015964	Ddx4	57	68.080	Mus_pahari
ENSSLDG00000015312	ddx4	100	68.408	MGP_SPRETEiJ_G0019772	Ddx4	57	68.408	Mus_spretus
ENSSLDG00000015312	ddx4	100	69.250	ENSMPUG00000007596	DDX4	55	69.250	Mustela_putorius_furo
ENSSLDG00000015312	ddx4	100	70.175	ENSMLUG00000001189	DDX4	55	70.175	Myotis_lucifugus
ENSSLDG00000015312	ddx4	100	68.000	ENSNGAG00000013259	Ddx4	57	68.000	Nannospalax_galili
ENSSLDG00000015312	ddx4	100	85.427	ENSNBRG00000014442	ddx4	100	74.194	Neolamprologus_brichardi
ENSSLDG00000015312	ddx4	100	69.674	ENSNLEG00000001662	DDX4	69	69.674	Nomascus_leucogenys
ENSSLDG00000015312	ddx4	100	69.674	ENSODEG00000016951	-	58	69.674	Octodon_degus
ENSSLDG00000015312	ddx4	100	68.421	ENSODEG00000003839	-	60	68.421	Octodon_degus
ENSSLDG00000015312	ddx4	100	85.678	ENSONIG00000012063	ddx4	83	85.678	Oreochromis_niloticus
ENSSLDG00000015312	ddx4	52	88.060	ENSONIG00000003749	-	50	88.060	Oreochromis_niloticus
ENSSLDG00000015312	ddx4	93	69.272	ENSOANG00000004888	-	94	69.272	Ornithorhynchus_anatinus
ENSSLDG00000015312	ddx4	100	69.674	ENSOCUG00000008597	DDX4	55	69.674	Oryctolagus_cuniculus
ENSSLDG00000015312	ddx4	100	84.962	ENSORLG00000020672	ddx4	64	84.962	Oryzias_latipes
ENSSLDG00000015312	ddx4	100	84.712	ENSORLG00020014206	ddx4	64	84.712	Oryzias_latipes_hni
ENSSLDG00000015312	ddx4	100	84.962	ENSORLG00015016600	ddx4	64	84.962	Oryzias_latipes_hsok
ENSSLDG00000015312	ddx4	100	82.134	ENSOMEG00000010651	ddx4	66	83.127	Oryzias_melastigma
ENSSLDG00000015312	ddx4	100	70.175	ENSOGAG00000007588	DDX4	54	70.175	Otolemur_garnettii
ENSSLDG00000015312	ddx4	100	69.173	ENSOARG00000007644	DDX4	55	69.173	Ovis_aries
ENSSLDG00000015312	ddx4	100	69.424	ENSPPAG00000033915	DDX4	69	69.424	Pan_paniscus
ENSSLDG00000015312	ddx4	100	68.672	ENSPPRG00000011417	DDX4	54	71.698	Panthera_pardus
ENSSLDG00000015312	ddx4	100	68.672	ENSPTIG00000007748	DDX4	68	65.163	Panthera_tigris_altaica
ENSSLDG00000015312	ddx4	100	69.424	ENSPTRG00000016884	DDX4	69	69.424	Pan_troglodytes
ENSSLDG00000015312	ddx4	100	69.674	ENSPANG00000010945	DDX4	69	69.674	Papio_anubis
ENSSLDG00000015312	ddx4	93	70.541	ENSPSIG00000017179	DDX4	60	70.541	Pelodiscus_sinensis
ENSSLDG00000015312	ddx4	99	74.177	ENSPMGG00000015642	ddx4	99	74.177	Periophthalmus_magnuspinnatus
ENSSLDG00000015312	ddx4	100	69.000	ENSPEMG00000010086	Ddx4	57	69.000	Peromyscus_maniculatus_bairdii
ENSSLDG00000015312	ddx4	100	68.000	ENSPCIG00000024758	DDX4	61	68.000	Phascolarctos_cinereus
ENSSLDG00000015312	ddx4	100	86.398	ENSPFOG00000018842	ddx4	62	86.398	Poecilia_formosa
ENSSLDG00000015312	ddx4	100	86.650	ENSPLAG00000020726	ddx4	62	86.650	Poecilia_latipinna
ENSSLDG00000015312	ddx4	100	86.398	ENSPMEG00000002976	ddx4	64	86.398	Poecilia_mexicana
ENSSLDG00000015312	ddx4	100	86.398	ENSPREG00000017840	ddx4	64	86.398	Poecilia_reticulata
ENSSLDG00000015312	ddx4	100	69.424	ENSPPYG00000015472	DDX4	55	69.424	Pongo_abelii
ENSSLDG00000015312	ddx4	100	65.414	ENSPCAG00000002675	DDX4	54	65.414	Procavia_capensis
ENSSLDG00000015312	ddx4	100	69.925	ENSPVAG00000002448	DDX4	56	69.925	Pteropus_vampyrus
ENSSLDG00000015312	ddx4	100	85.427	ENSPNYG00000022212	ddx4	69	85.427	Pundamilia_nyererei
ENSSLDG00000015312	ddx4	84	86.486	ENSPNAG00000003686	ddx4	53	86.486	Pygocentrus_nattereri
ENSSLDG00000015312	ddx4	93	71.774	ENSRNOG00000026686	Ddx4	53	71.774	Rattus_norvegicus
ENSSLDG00000015312	ddx4	100	69.424	ENSRBIG00000028795	DDX4	69	69.424	Rhinopithecus_bieti
ENSSLDG00000015312	ddx4	100	69.424	ENSRROG00000045392	DDX4	69	69.424	Rhinopithecus_roxellana
ENSSLDG00000015312	ddx4	88	53.693	YPL119C	DBP1	57	53.693	Saccharomyces_cerevisiae
ENSSLDG00000015312	ddx4	100	69.925	ENSSBOG00000035231	DDX4	57	69.925	Saimiri_boliviensis_boliviensis
ENSSLDG00000015312	ddx4	100	69.000	ENSSHAG00000009132	DDX4	56	69.000	Sarcophilus_harrisii
ENSSLDG00000015312	ddx4	100	76.131	ENSSFOG00015006531	ddx4	58	80.270	Scleropages_formosus
ENSSLDG00000015312	ddx4	97	86.911	ENSSMAG00000009800	ddx4	62	85.823	Scophthalmus_maximus
ENSSLDG00000015312	ddx4	100	98.241	ENSSDUG00000022015	ddx4	63	98.241	Seriola_dumerili
ENSSLDG00000015312	ddx4	100	69.674	ENSSARG00000004206	DDX4	55	69.674	Sorex_araneus
ENSSLDG00000015312	ddx4	93	72.432	ENSSPUG00000007260	DDX4	64	72.432	Sphenodon_punctatus
ENSSLDG00000015312	ddx4	100	85.176	ENSSPAG00000014307	ddx4	100	85.176	Stegastes_partitus
ENSSLDG00000015312	ddx4	100	69.674	ENSSSCG00000016913	DDX4	55	69.674	Sus_scrofa
ENSSLDG00000015312	ddx4	88	69.828	ENSTGUG00000002548	DDX4	79	69.828	Taeniopygia_guttata
ENSSLDG00000015312	ddx4	100	68.861	ENSTNIG00000014474	ddx4	70	68.861	Tetraodon_nigroviridis
ENSSLDG00000015312	ddx4	100	68.844	ENSTTRG00000009316	DDX4	55	68.844	Tursiops_truncatus
ENSSLDG00000015312	ddx4	100	69.424	ENSUAMG00000023028	DDX4	60	69.424	Ursus_americanus
ENSSLDG00000015312	ddx4	100	69.424	ENSUMAG00000009291	DDX4	60	69.424	Ursus_maritimus
ENSSLDG00000015312	ddx4	100	69.424	ENSVPAG00000009491	DDX4	55	69.424	Vicugna_pacos
ENSSLDG00000015312	ddx4	100	69.424	ENSVVUG00000021369	DDX4	57	69.424	Vulpes_vulpes
ENSSLDG00000015312	ddx4	97	64.398	ENSXETG00000030832	DDX4	61	64.062	Xenopus_tropicalis
ENSSLDG00000015312	ddx4	100	86.650	ENSXMAG00000009677	ddx4	65	86.650	Xiphophorus_maculatus