EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSLDG00000015398 (Gene tree)
Gene ID: -
Gene Symbol: POLR1B
Alias: FLJ10816|FLJ21921|RPA2|Rpo1-2
Full Name: DNA-directed RNA polymerase I subunit RPA2-like
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 3165 bases
Position: chrPEQF01099431.1:4227-7391
Accession: 111645634
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000019650	RNA_pol_Rpa2_4	PF06883.12	1.1e-21	1	1
ENSSLDP00000019650	RNA_pol_Rpb2_2	PF04561.14	1e-07	1	1
ENSSLDP00000019650	RNA_pol_Rpb2_3	PF04565.16	1.2e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000020310	POLR1B-201	1551	XM_023394902	ENSSLDP00000019650	516 (aa)	XP_023250670	-

Gene Model

Click here to download ENSSLDG00000015398's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000015398's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000015398	POLR1B	97	67.793	ENSG00000125630	POLR1B	50	67.793	Homo_sapiens
ENSSLDG00000015398	POLR1B	76	63.359	ENSACAG00000005660	POLR1B	59	63.359	Anolis_carolinensis
ENSSLDG00000015398	POLR1B	78	91.304	ENSCPBG00000003962	POLR1B	66	70.611	Chrysemys_picta_bellii
ENSSLDG00000015398	POLR1B	97	67.992	ENSMLEG00000030588	POLR1B	50	67.992	Mandrillus_leucophaeus
ENSSLDG00000015398	POLR1B	100	64.922	MGP_CAROLIEiJ_G0024281	Polr1b	66	66.135	Mus_caroli
ENSSLDG00000015398	POLR1B	100	63.953	ENSMUSG00000027395	Polr1b	61	65.139	Mus_musculus
ENSSLDG00000015398	POLR1B	98	65.675	MGP_PahariEiJ_G0025726	Polr1b	60	65.936	Mus_pahari
ENSSLDG00000015398	POLR1B	100	63.953	MGP_SPRETEiJ_G0025201	Polr1b	61	65.070	Mus_spretus
ENSSLDG00000015398	POLR1B	97	79.167	ENSOMEG00000005073	polr1b	61	79.167	Oryzias_melastigma
ENSSLDG00000015398	POLR1B	97	67.594	ENSPEMG00000008619	Polr1b	63	67.594	Peromyscus_maniculatus_bairdii
ENSSLDG00000015398	POLR1B	97	66.998	ENSSPUG00000014298	POLR1B	50	67.197	Sphenodon_punctatus
ENSSLDG00000015398	POLR1B	100	76.938	ENSTRUG00000006581	polr1b	65	78.287	Takifugu_rubripes