EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSLDG00000015423 (Gene tree)
Gene ID: -
Gene Symbol: prpf3
Alias: HPRP3|wu:fa11f05
Full Name: pre-mRNA processing factor 3
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 7238 bases
Position: chrPEQF01098409.1:404595-411832
Accession: 111652199
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000019687	PRP3	PF08572.10	3.5e-77	1	1
ENSSLDP00000019718	PRP3	PF08572.10	2.9e-55	1	2
ENSSLDP00000019718	PRP3	PF08572.10	2.9e-55	2	2
ENSSLDP00000019718	PWI	PF01480.17	1.6e-11	1	1
ENSSLDP00000019687	PWI	PF01480.17	2e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000020381	-	1902	-	ENSSLDP00000019718	633 (aa)	-	-
ENSSLDT00000020347	-	3048	XM_023402394	ENSSLDP00000019687	711 (aa)	XP_023258162	UPI000C6F6540

Gene Model

Click here to download ENSSLDG00000015423's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000015423's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000015423	prpf3	99	71.049	ENSG00000117360	PRPF3	100	70.769	Homo_sapiens
ENSSLDG00000015423	prpf3	100	90.577	ENSAPOG00000015584	prpf3	100	90.577	Acanthochromis_polyacanthus
ENSSLDG00000015423	prpf3	99	71.189	ENSAMEG00000001630	PRPF3	100	70.909	Ailuropoda_melanoleuca
ENSSLDG00000015423	prpf3	100	90.717	ENSACIG00000007876	prpf3	100	90.717	Amphilophus_citrinellus
ENSSLDG00000015423	prpf3	100	91.280	ENSAOCG00000011449	prpf3	100	90.999	Amphiprion_ocellaris
ENSSLDG00000015423	prpf3	100	92.686	ENSATEG00000023583	prpf3	100	92.124	Anabas_testudineus
ENSSLDG00000015423	prpf3	99	72.448	ENSAPLG00000002440	PRPF3	100	71.469	Anas_platyrhynchos
ENSSLDG00000015423	prpf3	99	72.106	ENSACAG00000003176	PRPF3	100	71.688	Anolis_carolinensis
ENSSLDG00000015423	prpf3	99	71.049	ENSANAG00000026138	PRPF3	100	70.769	Aotus_nancymaae
ENSSLDG00000015423	prpf3	100	88.889	ENSACLG00000020127	prpf3	100	88.467	Astatotilapia_calliptera
ENSSLDG00000015423	prpf3	100	83.029	ENSAMXG00000007306	prpf3	100	82.468	Astyanax_mexicanus
ENSSLDG00000015423	prpf3	99	71.049	ENSBTAG00000013946	PRPF3	100	70.769	Bos_taurus
ENSSLDG00000015423	prpf3	81	38.821	WBGene00010844	prp-3	95	35.182	Caenorhabditis_elegans
ENSSLDG00000015423	prpf3	99	71.049	ENSCJAG00000009926	PRPF3	100	70.769	Callithrix_jacchus
ENSSLDG00000015423	prpf3	99	71.049	ENSCAFG00000011820	PRPF3	100	70.769	Canis_familiaris
ENSSLDG00000015423	prpf3	81	70.294	ENSCAFG00020019653	PRPF3	100	70.121	Canis_lupus_dingo
ENSSLDG00000015423	prpf3	99	71.049	ENSCHIG00000015434	PRPF3	100	70.769	Capra_hircus
ENSSLDG00000015423	prpf3	99	71.189	ENSTSYG00000001383	PRPF3	100	70.769	Carlito_syrichta
ENSSLDG00000015423	prpf3	92	62.243	ENSCAPG00000017812	PRPF3	95	62.243	Cavia_aperea
ENSSLDG00000015423	prpf3	99	71.049	ENSCPOG00000008068	PRPF3	100	70.629	Cavia_porcellus
ENSSLDG00000015423	prpf3	99	71.049	ENSCCAG00000026380	PRPF3	100	70.769	Cebus_capucinus
ENSSLDG00000015423	prpf3	99	59.028	ENSCATG00000041778	PRPF3	100	58.750	Cercocebus_atys
ENSSLDG00000015423	prpf3	99	71.189	ENSCLAG00000015009	PRPF3	100	70.909	Chinchilla_lanigera
ENSSLDG00000015423	prpf3	79	82.812	ENSCHOG00000011645	PRPF3	76	81.387	Choloepus_hoffmanni
ENSSLDG00000015423	prpf3	99	71.608	ENSCPBG00000008216	PRPF3	100	71.189	Chrysemys_picta_bellii
ENSSLDG00000015423	prpf3	58	59.091	ENSCING00000003312	-	99	59.091	Ciona_intestinalis
ENSSLDG00000015423	prpf3	83	50.257	ENSCSAVG00000008720	-	94	53.819	Ciona_savignyi
ENSSLDG00000015423	prpf3	99	70.490	ENSCANG00000036769	PRPF3	100	70.210	Colobus_angolensis_palliatus
ENSSLDG00000015423	prpf3	99	71.049	ENSCGRG00001019100	Prpf3	100	70.769	Cricetulus_griseus_chok1gshd
ENSSLDG00000015423	prpf3	99	71.049	ENSCGRG00000007322	Prpf3	100	70.769	Cricetulus_griseus_crigri
ENSSLDG00000015423	prpf3	100	88.467	ENSCSEG00000002532	prpf3	100	88.467	Cynoglossus_semilaevis
ENSSLDG00000015423	prpf3	100	86.920	ENSCVAG00000009318	prpf3	100	86.779	Cyprinodon_variegatus
ENSSLDG00000015423	prpf3	100	80.450	ENSDARG00000086425	prpf3	100	80.450	Danio_rerio
ENSSLDG00000015423	prpf3	99	66.183	ENSDNOG00000005904	PRPF3	100	67.227	Dasypus_novemcinctus
ENSSLDG00000015423	prpf3	93	71.171	ENSDORG00000008664	Prpf3	100	70.721	Dipodomys_ordii
ENSSLDG00000015423	prpf3	80	50.512	FBgn0036915	Prp3	99	50.261	Drosophila_melanogaster
ENSSLDG00000015423	prpf3	99	71.189	ENSETEG00000019124	PRPF3	100	71.049	Echinops_telfairi
ENSSLDG00000015423	prpf3	100	62.550	ENSEBUG00000011680	prpf3	100	62.416	Eptatretus_burgeri
ENSSLDG00000015423	prpf3	99	70.909	ENSEASG00005001566	PRPF3	100	70.629	Equus_asinus_asinus
ENSSLDG00000015423	prpf3	99	71.049	ENSECAG00000019840	PRPF3	100	70.769	Equus_caballus
ENSSLDG00000015423	prpf3	82	73.923	ENSEEUG00000007338	PRPF3	85	73.696	Erinaceus_europaeus
ENSSLDG00000015423	prpf3	100	75.480	ENSELUG00000013624	prpf3	100	76.050	Esox_lucius
ENSSLDG00000015423	prpf3	99	71.049	ENSFCAG00000013940	PRPF3	100	70.769	Felis_catus
ENSSLDG00000015423	prpf3	99	71.469	ENSFDAG00000010365	PRPF3	100	71.189	Fukomys_damarensis
ENSSLDG00000015423	prpf3	100	85.513	ENSFHEG00000021746	prpf3	100	85.091	Fundulus_heteroclitus
ENSSLDG00000015423	prpf3	100	84.388	ENSGMOG00000008535	prpf3	100	84.388	Gadus_morhua
ENSSLDG00000015423	prpf3	99	72.587	ENSGALG00000028205	PRPF3	100	71.608	Gallus_gallus
ENSSLDG00000015423	prpf3	100	84.810	ENSGAFG00000012671	prpf3	100	83.826	Gambusia_affinis
ENSSLDG00000015423	prpf3	100	88.889	ENSGACG00000011792	prpf3	100	88.748	Gasterosteus_aculeatus
ENSSLDG00000015423	prpf3	99	71.608	ENSGAGG00000013765	PRPF3	100	74.126	Gopherus_agassizii
ENSSLDG00000015423	prpf3	86	78.171	ENSGGOG00000013174	PRPF3	100	77.876	Gorilla_gorilla
ENSSLDG00000015423	prpf3	100	89.451	ENSHBUG00000003493	prpf3	100	89.030	Haplochromis_burtoni
ENSSLDG00000015423	prpf3	99	56.765	ENSHGLG00000016033	-	100	56.474	Heterocephalus_glaber_female
ENSSLDG00000015423	prpf3	99	71.189	ENSHGLG00000016569	PRPF3	100	70.909	Heterocephalus_glaber_female
ENSSLDG00000015423	prpf3	99	57.054	ENSHGLG00100008951	-	100	57.076	Heterocephalus_glaber_male
ENSSLDG00000015423	prpf3	99	71.189	ENSHGLG00100007590	PRPF3	100	70.909	Heterocephalus_glaber_male
ENSSLDG00000015423	prpf3	100	81.678	ENSHCOG00000014058	prpf3	100	81.399	Hippocampus_comes
ENSSLDG00000015423	prpf3	100	82.188	ENSIPUG00000000902	PRPF3	100	81.627	Ictalurus_punctatus
ENSSLDG00000015423	prpf3	99	71.049	ENSSTOG00000001889	PRPF3	100	70.769	Ictidomys_tridecemlineatus
ENSSLDG00000015423	prpf3	100	87.060	ENSKMAG00000001390	prpf3	100	86.779	Kryptolebias_marmoratus
ENSSLDG00000015423	prpf3	100	92.827	ENSLBEG00000026310	prpf3	100	97.826	Labrus_bergylta
ENSSLDG00000015423	prpf3	93	68.263	ENSLACG00000010541	PRPF3	100	68.114	Latimeria_chalumnae
ENSSLDG00000015423	prpf3	99	71.049	ENSLAFG00000004713	PRPF3	100	70.769	Loxodonta_africana
ENSSLDG00000015423	prpf3	99	71.049	ENSMFAG00000039791	PRPF3	100	70.769	Macaca_fascicularis
ENSSLDG00000015423	prpf3	92	70.642	ENSMMUG00000016301	PRPF3	97	71.451	Macaca_mulatta
ENSSLDG00000015423	prpf3	99	71.049	ENSMNEG00000038161	PRPF3	100	70.769	Macaca_nemestrina
ENSSLDG00000015423	prpf3	98	48.802	ENSMLEG00000041065	-	97	48.353	Mandrillus_leucophaeus
ENSSLDG00000015423	prpf3	86	78.171	ENSMLEG00000040609	PRPF3	100	77.876	Mandrillus_leucophaeus
ENSSLDG00000015423	prpf3	100	91.139	ENSMAMG00000014968	prpf3	100	91.139	Mastacembelus_armatus
ENSSLDG00000015423	prpf3	100	90.717	ENSMZEG00005015970	prpf3	100	90.717	Maylandia_zebra
ENSSLDG00000015423	prpf3	99	72.587	ENSMGAG00000000707	PRPF3	100	71.608	Meleagris_gallopavo
ENSSLDG00000015423	prpf3	99	70.909	ENSMAUG00000017112	Prpf3	100	70.629	Mesocricetus_auratus
ENSSLDG00000015423	prpf3	99	70.909	ENSMICG00000015386	PRPF3	100	73.776	Microcebus_murinus
ENSSLDG00000015423	prpf3	99	71.049	ENSMOCG00000000242	Prpf3	100	70.769	Microtus_ochrogaster
ENSSLDG00000015423	prpf3	100	84.519	ENSMMOG00000016131	prpf3	100	84.240	Mola_mola
ENSSLDG00000015423	prpf3	99	71.189	ENSMODG00000018774	PRPF3	100	70.909	Monodelphis_domestica
ENSSLDG00000015423	prpf3	100	87.377	ENSMALG00000007257	prpf3	100	87.482	Monopterus_albus
ENSSLDG00000015423	prpf3	99	71.049	MGP_CAROLIEiJ_G0025354	Prpf3	100	70.629	Mus_caroli
ENSSLDG00000015423	prpf3	99	71.049	ENSMUSG00000015748	Prpf3	100	70.629	Mus_musculus
ENSSLDG00000015423	prpf3	99	71.189	MGP_PahariEiJ_G0026798	Prpf3	100	70.950	Mus_pahari
ENSSLDG00000015423	prpf3	99	71.049	MGP_SPRETEiJ_G0026298	Prpf3	100	70.629	Mus_spretus
ENSSLDG00000015423	prpf3	99	69.510	ENSMPUG00000005080	PRPF3	100	69.371	Mustela_putorius_furo
ENSSLDG00000015423	prpf3	99	71.369	ENSMLUG00000004646	-	100	71.089	Myotis_lucifugus
ENSSLDG00000015423	prpf3	99	71.049	ENSNGAG00000000910	Prpf3	100	70.769	Nannospalax_galili
ENSSLDG00000015423	prpf3	100	91.561	ENSNBRG00000003462	prpf3	100	91.561	Neolamprologus_brichardi
ENSSLDG00000015423	prpf3	90	71.607	ENSNLEG00000009841	PRPF3	99	71.451	Nomascus_leucogenys
ENSSLDG00000015423	prpf3	74	79.710	ENSMEUG00000008733	PRPF3	74	79.710	Notamacropus_eugenii
ENSSLDG00000015423	prpf3	99	71.189	ENSOPRG00000010139	PRPF3	100	70.769	Ochotona_princeps
ENSSLDG00000015423	prpf3	99	53.324	ENSODEG00000014412	-	100	52.909	Octodon_degus
ENSSLDG00000015423	prpf3	99	71.329	ENSODEG00000011363	-	100	70.909	Octodon_degus
ENSSLDG00000015423	prpf3	100	90.999	ENSONIG00000006394	prpf3	100	90.999	Oreochromis_niloticus
ENSSLDG00000015423	prpf3	99	55.168	ENSOANG00000015441	PRPF3	100	55.168	Ornithorhynchus_anatinus
ENSSLDG00000015423	prpf3	99	71.049	ENSOCUG00000011760	PRPF3	100	70.769	Oryctolagus_cuniculus
ENSSLDG00000015423	prpf3	100	85.654	ENSORLG00000010330	prpf3	100	84.669	Oryzias_latipes
ENSSLDG00000015423	prpf3	100	85.654	ENSORLG00020009054	prpf3	100	84.669	Oryzias_latipes_hni
ENSSLDG00000015423	prpf3	100	85.513	ENSORLG00015015016	prpf3	100	84.529	Oryzias_latipes_hsok
ENSSLDG00000015423	prpf3	100	86.357	ENSOMEG00000000940	prpf3	100	85.795	Oryzias_melastigma
ENSSLDG00000015423	prpf3	99	67.364	ENSOGAG00000005352	PRPF3	100	67.085	Otolemur_garnettii
ENSSLDG00000015423	prpf3	99	71.049	ENSOARG00000020798	PRPF3	100	70.769	Ovis_aries
ENSSLDG00000015423	prpf3	98	54.688	ENSPPAG00000043769	-	99	53.835	Pan_paniscus
ENSSLDG00000015423	prpf3	99	70.909	ENSPPAG00000030983	PRPF3	100	70.629	Pan_paniscus
ENSSLDG00000015423	prpf3	99	71.049	ENSPPRG00000000731	PRPF3	100	70.769	Panthera_pardus
ENSSLDG00000015423	prpf3	99	71.049	ENSPTIG00000005516	PRPF3	100	70.769	Panthera_tigris_altaica
ENSSLDG00000015423	prpf3	98	53.835	ENSPTRG00000047819	-	99	52.983	Pan_troglodytes
ENSSLDG00000015423	prpf3	99	71.049	ENSPTRG00000001254	PRPF3	100	70.769	Pan_troglodytes
ENSSLDG00000015423	prpf3	99	70.909	ENSPANG00000000499	PRPF3	100	70.629	Papio_anubis
ENSSLDG00000015423	prpf3	100	82.937	ENSPKIG00000010501	prpf3	100	82.517	Paramormyrops_kingsleyae
ENSSLDG00000015423	prpf3	99	71.989	ENSPSIG00000014877	PRPF3	100	71.289	Pelodiscus_sinensis
ENSSLDG00000015423	prpf3	100	73.455	ENSPMGG00000007776	prpf3	100	73.455	Periophthalmus_magnuspinnatus
ENSSLDG00000015423	prpf3	99	71.049	ENSPEMG00000011672	Prpf3	100	70.769	Peromyscus_maniculatus_bairdii
ENSSLDG00000015423	prpf3	60	73.227	ENSPMAG00000005588	prpf3	99	71.903	Petromyzon_marinus
ENSSLDG00000015423	prpf3	99	71.189	ENSPCIG00000008795	PRPF3	100	70.909	Phascolarctos_cinereus
ENSSLDG00000015423	prpf3	100	85.534	ENSPFOG00000013638	prpf3	100	85.253	Poecilia_formosa
ENSSLDG00000015423	prpf3	100	84.951	ENSPLAG00000018103	prpf3	100	84.669	Poecilia_latipinna
ENSSLDG00000015423	prpf3	100	85.091	ENSPMEG00000023546	prpf3	100	84.810	Poecilia_mexicana
ENSSLDG00000015423	prpf3	100	85.232	ENSPREG00000017216	prpf3	100	84.529	Poecilia_reticulata
ENSSLDG00000015423	prpf3	77	61.835	ENSPPYG00000018646	-	99	61.468	Pongo_abelii
ENSSLDG00000015423	prpf3	93	70.015	ENSPPYG00000000900	PRPF3	99	69.715	Pongo_abelii
ENSSLDG00000015423	prpf3	87	72.231	ENSPCAG00000014908	PRPF3	87	71.910	Procavia_capensis
ENSSLDG00000015423	prpf3	99	70.909	ENSPCOG00000013828	PRPF3	100	70.629	Propithecus_coquereli
ENSSLDG00000015423	prpf3	99	71.189	ENSPVAG00000013472	PRPF3	100	70.769	Pteropus_vampyrus
ENSSLDG00000015423	prpf3	100	91.421	ENSPNYG00000004279	prpf3	100	91.421	Pundamilia_nyererei
ENSSLDG00000015423	prpf3	100	83.357	ENSPNAG00000001799	prpf3	100	82.797	Pygocentrus_nattereri
ENSSLDG00000015423	prpf3	99	71.189	ENSRNOG00000025629	Prpf3	100	70.769	Rattus_norvegicus
ENSSLDG00000015423	prpf3	83	71.631	ENSRBIG00000028854	PRPF3	98	70.922	Rhinopithecus_bieti
ENSSLDG00000015423	prpf3	99	71.049	ENSRROG00000027464	PRPF3	100	70.769	Rhinopithecus_roxellana
ENSSLDG00000015423	prpf3	99	68.502	ENSSBOG00000033104	PRPF3	100	68.196	Saimiri_boliviensis_boliviensis
ENSSLDG00000015423	prpf3	99	70.810	ENSSHAG00000009548	PRPF3	100	70.531	Sarcophilus_harrisii
ENSSLDG00000015423	prpf3	100	83.403	ENSSFOG00015022014	prpf3	100	82.845	Scleropages_formosus
ENSSLDG00000015423	prpf3	100	92.827	ENSSMAG00000015739	prpf3	100	92.546	Scophthalmus_maximus
ENSSLDG00000015423	prpf3	100	95.931	ENSSDUG00000006840	prpf3	100	95.931	Seriola_dumerili
ENSSLDG00000015423	prpf3	99	71.049	ENSSARG00000011064	PRPF3	100	70.769	Sorex_araneus
ENSSLDG00000015423	prpf3	99	71.172	ENSSPUG00000000809	PRPF3	100	70.483	Sphenodon_punctatus
ENSSLDG00000015423	prpf3	100	93.530	ENSSPAG00000018721	prpf3	100	93.108	Stegastes_partitus
ENSSLDG00000015423	prpf3	99	71.049	ENSSSCG00000030119	PRPF3	100	74.126	Sus_scrofa
ENSSLDG00000015423	prpf3	93	79.808	ENSTGUG00000004552	PRPF3	88	80.769	Taeniopygia_guttata
ENSSLDG00000015423	prpf3	100	82.584	ENSTRUG00000014923	prpf3	100	81.742	Takifugu_rubripes
ENSSLDG00000015423	prpf3	99	83.495	ENSTNIG00000008058	prpf3	100	83.079	Tetraodon_nigroviridis
ENSSLDG00000015423	prpf3	81	72.789	ENSTBEG00000014072	PRPF3	88	73.923	Tupaia_belangeri
ENSSLDG00000015423	prpf3	99	66.154	ENSTTRG00000010616	PRPF3	100	65.874	Tursiops_truncatus
ENSSLDG00000015423	prpf3	80	74.126	ENSUAMG00000009345	PRPF3	100	74.126	Ursus_americanus
ENSSLDG00000015423	prpf3	99	71.049	ENSUMAG00000003720	PRPF3	100	70.769	Ursus_maritimus
ENSSLDG00000015423	prpf3	86	78.005	ENSVPAG00000005425	PRPF3	89	77.778	Vicugna_pacos
ENSSLDG00000015423	prpf3	99	71.289	ENSVVUG00000007933	PRPF3	100	70.769	Vulpes_vulpes
ENSSLDG00000015423	prpf3	99	70.153	ENSXETG00000018654	prpf3	100	69.735	Xenopus_tropicalis
ENSSLDG00000015423	prpf3	100	85.232	ENSXMAG00000016347	prpf3	100	84.951	Xiphophorus_maculatus