EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000015477 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 3460 bases
Position: chrPEQF01095514.1:9371-12830
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000019738	RRM_1	PF00076.22	1.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000020402	-	1473	-	ENSSLDP00000019738	98 (aa)	-	-

Gene Model

Click here to download ENSSLDG00000015477's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000015477's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000015477	-	88	65.116	ENSSLDG00000016285	-	85	65.116
ENSSLDG00000015477	-	99	83.505	ENSSLDG00000012105	-	90	83.505

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000015477	-	85	71.084	ENSG00000153914	SREK1	83	71.084	Homo_sapiens
ENSSLDG00000015477	-	86	79.762	ENSG00000116754	SRSF11	68	77.011	Homo_sapiens
ENSSLDG00000015477	-	99	83.505	ENSAPOG00000004488	-	90	83.505	Acanthochromis_polyacanthus
ENSSLDG00000015477	-	99	100.000	ENSAPOG00000007244	-	70	100.000	Acanthochromis_polyacanthus
ENSSLDG00000015477	-	99	83.505	ENSACIG00000018075	-	90	83.505	Amphilophus_citrinellus
ENSSLDG00000015477	-	90	93.182	ENSACIG00000012348	-	93	93.182	Amphilophus_citrinellus
ENSSLDG00000015477	-	88	65.116	ENSACIG00000015055	-	69	65.116	Amphilophus_citrinellus
ENSSLDG00000015477	-	81	93.671	ENSAOCG00000000739	-	84	93.671	Amphiprion_ocellaris
ENSSLDG00000015477	-	88	66.279	ENSAOCG00000024368	-	87	66.279	Amphiprion_ocellaris
ENSSLDG00000015477	-	99	83.505	ENSAPEG00000003619	SRSF11	90	83.505	Amphiprion_percula
ENSSLDG00000015477	-	87	100.000	ENSAPEG00000003142	SRSF11	88	100.000	Amphiprion_percula
ENSSLDG00000015477	-	86	67.857	ENSAPEG00000002218	-	91	67.857	Amphiprion_percula
ENSSLDG00000015477	-	85	67.470	ENSATEG00000009464	-	91	67.470	Anabas_testudineus
ENSSLDG00000015477	-	95	91.579	ENSATEG00000011691	srsf11	81	96.552	Anabas_testudineus
ENSSLDG00000015477	-	99	83.505	ENSATEG00000007534	-	90	83.505	Anabas_testudineus
ENSSLDG00000015477	-	85	71.084	ENSANAG00000031358	SREK1	83	71.084	Aotus_nancymaae
ENSSLDG00000015477	-	100	97.959	ENSACLG00000000623	srsf11	100	97.959	Astatotilapia_calliptera
ENSSLDG00000015477	-	85	71.084	ENSBTAG00000007321	SREK1	83	71.084	Bos_taurus
ENSSLDG00000015477	-	85	71.084	ENSCJAG00000015950	SREK1	83	71.084	Callithrix_jacchus
ENSSLDG00000015477	-	85	71.084	ENSCAFG00020019449	-	83	71.084	Canis_lupus_dingo
ENSSLDG00000015477	-	84	81.707	ENSCAFG00020017255	-	75	78.824	Canis_lupus_dingo
ENSSLDG00000015477	-	84	81.707	ENSCHIG00000025295	SRSF11	72	78.824	Capra_hircus
ENSSLDG00000015477	-	85	71.084	ENSCHIG00000025052	-	83	71.084	Capra_hircus
ENSSLDG00000015477	-	83	76.543	ENSTSYG00000033270	-	59	73.810	Carlito_syrichta
ENSSLDG00000015477	-	85	71.084	ENSTSYG00000036957	SREK1	83	71.084	Carlito_syrichta
ENSSLDG00000015477	-	85	71.084	ENSCCAG00000020591	SREK1	83	71.084	Cebus_capucinus
ENSSLDG00000015477	-	85	71.084	ENSCATG00000031482	SREK1	83	71.084	Cercocebus_atys
ENSSLDG00000015477	-	84	73.171	ENSCPBG00000026866	SREK1	63	73.171	Chrysemys_picta_bellii
ENSSLDG00000015477	-	88	74.419	ENSCPBG00000022430	-	76	74.419	Chrysemys_picta_bellii
ENSSLDG00000015477	-	85	71.084	ENSCANG00000030421	SREK1	83	71.084	Colobus_angolensis_palliatus
ENSSLDG00000015477	-	86	67.857	ENSCSEG00000013934	-	86	68.421	Cynoglossus_semilaevis
ENSSLDG00000015477	-	85	66.265	ENSCVAG00000002404	-	67	66.265	Cyprinodon_variegatus
ENSSLDG00000015477	-	87	87.059	ENSDARG00000098574	srsf11	96	83.908	Danio_rerio
ENSSLDG00000015477	-	84	70.732	ENSDORG00000023160	-	62	70.732	Dipodomys_ordii
ENSSLDG00000015477	-	84	81.707	ENSEASG00005007847	SRSF11	75	78.824	Equus_asinus_asinus
ENSSLDG00000015477	-	85	71.084	ENSEASG00005006832	-	73	71.084	Equus_asinus_asinus
ENSSLDG00000015477	-	85	71.084	ENSECAG00000035731	-	72	71.084	Equus_caballus
ENSSLDG00000015477	-	86	79.762	ENSFCAG00000034448	-	69	77.011	Felis_catus
ENSSLDG00000015477	-	85	69.880	ENSFCAG00000036884	-	83	69.880	Felis_catus
ENSSLDG00000015477	-	84	65.854	ENSFHEG00000020959	-	64	65.854	Fundulus_heteroclitus
ENSSLDG00000015477	-	85	72.289	ENSGALG00000043541	SREK1	84	72.289	Gallus_gallus
ENSSLDG00000015477	-	84	67.073	ENSGAFG00000001732	-	67	67.073	Gambusia_affinis
ENSSLDG00000015477	-	89	79.310	ENSGAGG00000022411	-	84	79.310	Gopherus_agassizii
ENSSLDG00000015477	-	84	73.171	ENSGAGG00000006087	SREK1	63	73.171	Gopherus_agassizii
ENSSLDG00000015477	-	85	71.084	ENSGGOG00000004737	SREK1	83	71.084	Gorilla_gorilla
ENSSLDG00000015477	-	92	62.222	ENSHBUG00000007082	-	67	62.222	Haplochromis_burtoni
ENSSLDG00000015477	-	100	95.918	ENSHCOG00000016860	-	100	95.918	Hippocampus_comes
ENSSLDG00000015477	-	83	69.136	ENSHCOG00000017228	-	76	68.293	Hippocampus_comes
ENSSLDG00000015477	-	85	71.084	ENSSTOG00000008850	SREK1	83	71.084	Ictidomys_tridecemlineatus
ENSSLDG00000015477	-	84	69.512	ENSJJAG00000008846	-	64	69.512	Jaculus_jaculus
ENSSLDG00000015477	-	100	98.980	ENSLBEG00000024167	srsf11	100	98.980	Labrus_bergylta
ENSSLDG00000015477	-	88	66.279	ENSLBEG00000022954	-	62	66.279	Labrus_bergylta
ENSSLDG00000015477	-	85	71.084	ENSMFAG00000039823	SREK1	83	71.084	Macaca_fascicularis
ENSSLDG00000015477	-	83	71.605	ENSMMUG00000014586	SREK1	74	71.605	Macaca_mulatta
ENSSLDG00000015477	-	85	71.084	ENSMNEG00000030723	SREK1	83	71.084	Macaca_nemestrina
ENSSLDG00000015477	-	85	71.084	ENSMLEG00000039078	SREK1	83	71.084	Mandrillus_leucophaeus
ENSSLDG00000015477	-	92	62.222	ENSMAMG00000003099	-	87	62.222	Mastacembelus_armatus
ENSSLDG00000015477	-	99	83.505	ENSMAMG00000015002	-	91	83.505	Mastacembelus_armatus
ENSSLDG00000015477	-	79	67.532	ENSMZEG00005005707	-	60	67.532	Maylandia_zebra
ENSSLDG00000015477	-	85	71.084	ENSMICG00000034959	SREK1	83	71.084	Microcebus_murinus
ENSSLDG00000015477	-	87	98.824	ENSMMOG00000008877	-	84	98.824	Mola_mola
ENSSLDG00000015477	-	99	83.505	ENSMMOG00000016751	-	90	83.505	Mola_mola
ENSSLDG00000015477	-	86	63.095	ENSMALG00000017086	srek1	94	63.095	Monopterus_albus
ENSSLDG00000015477	-	100	94.898	ENSMALG00000016608	srsf11	100	94.898	Monopterus_albus
ENSSLDG00000015477	-	89	77.011	MGP_CAROLIEiJ_G0025767	Srsf11	87	77.011	Mus_caroli
ENSSLDG00000015477	-	89	77.011	ENSMUSG00000055436	Srsf11	86	77.011	Mus_musculus
ENSSLDG00000015477	-	89	77.011	MGP_PahariEiJ_G0027217	Srsf11	87	77.011	Mus_pahari
ENSSLDG00000015477	-	89	77.011	MGP_SPRETEiJ_G0026719	Srsf11	87	77.011	Mus_spretus
ENSSLDG00000015477	-	84	70.732	ENSNGAG00000014631	-	62	70.732	Nannospalax_galili
ENSSLDG00000015477	-	92	62.222	ENSNBRG00000010656	-	67	62.222	Neolamprologus_brichardi
ENSSLDG00000015477	-	90	94.318	ENSNBRG00000020213	-	93	94.318	Neolamprologus_brichardi
ENSSLDG00000015477	-	85	71.084	ENSNLEG00000003827	SREK1	83	71.084	Nomascus_leucogenys
ENSSLDG00000015477	-	84	71.951	ENSODEG00000016218	-	79	71.605	Octodon_degus
ENSSLDG00000015477	-	100	83.673	ENSORLG00000030366	-	87	83.673	Oryzias_latipes
ENSSLDG00000015477	-	78	68.421	ENSORLG00000002711	-	63	68.421	Oryzias_latipes
ENSSLDG00000015477	-	96	60.638	ENSORLG00020012815	-	63	67.470	Oryzias_latipes_hni
ENSSLDG00000015477	-	100	83.673	ENSORLG00020009393	-	87	83.673	Oryzias_latipes_hni
ENSSLDG00000015477	-	85	67.470	ENSORLG00015020455	-	65	67.470	Oryzias_latipes_hsok
ENSSLDG00000015477	-	100	83.673	ENSORLG00015009374	-	87	83.673	Oryzias_latipes_hsok
ENSSLDG00000015477	-	84	71.951	ENSPPAG00000031605	SREK1	74	71.605	Pan_paniscus
ENSSLDG00000015477	-	85	69.880	ENSPPRG00000024617	SREK1	83	69.880	Panthera_pardus
ENSSLDG00000015477	-	85	69.880	ENSPTIG00000006608	SREK1	83	69.880	Panthera_tigris_altaica
ENSSLDG00000015477	-	85	71.084	ENSPTRG00000016936	SREK1	83	71.084	Pan_troglodytes
ENSSLDG00000015477	-	85	71.084	ENSPANG00000008953	SREK1	83	71.084	Papio_anubis
ENSSLDG00000015477	-	90	92.045	ENSPKIG00000021576	-	93	92.045	Paramormyrops_kingsleyae
ENSSLDG00000015477	-	84	68.293	ENSPMGG00000017029	-	71	68.293	Periophthalmus_magnuspinnatus
ENSSLDG00000015477	-	88	91.860	ENSPMGG00000000954	-	81	91.860	Periophthalmus_magnuspinnatus
ENSSLDG00000015477	-	87	90.588	ENSPMGG00000005045	-	75	90.588	Periophthalmus_magnuspinnatus
ENSSLDG00000015477	-	84	67.073	ENSPLAG00000014609	-	60	67.073	Poecilia_latipinna
ENSSLDG00000015477	-	84	67.073	ENSPLAG00000008818	-	60	67.073	Poecilia_latipinna
ENSSLDG00000015477	-	93	86.813	ENSPLAG00000009484	-	63	86.813	Poecilia_latipinna
ENSSLDG00000015477	-	84	67.073	ENSPMEG00000006824	-	60	67.073	Poecilia_mexicana
ENSSLDG00000015477	-	93	86.813	ENSPMEG00000023453	-	63	86.813	Poecilia_mexicana
ENSSLDG00000015477	-	88	93.023	ENSPMEG00000018837	srsf11	70	93.023	Poecilia_mexicana
ENSSLDG00000015477	-	84	67.073	ENSPMEG00000006607	-	60	67.073	Poecilia_mexicana
ENSSLDG00000015477	-	85	67.470	ENSPREG00000019922	-	66	67.470	Poecilia_reticulata
ENSSLDG00000015477	-	85	71.084	ENSPCOG00000026230	SREK1	83	71.084	Propithecus_coquereli
ENSSLDG00000015477	-	92	62.222	ENSPNYG00000007178	-	67	62.222	Pundamilia_nyererei
ENSSLDG00000015477	-	85	71.084	ENSRBIG00000033818	SREK1	83	71.084	Rhinopithecus_bieti
ENSSLDG00000015477	-	84	81.707	ENSRBIG00000042971	SRSF11	65	78.824	Rhinopithecus_bieti
ENSSLDG00000015477	-	85	71.084	ENSRROG00000017210	SREK1	83	71.084	Rhinopithecus_roxellana
ENSSLDG00000015477	-	85	71.084	ENSSBOG00000031230	SREK1	83	71.084	Saimiri_boliviensis_boliviensis
ENSSLDG00000015477	-	84	81.707	ENSSBOG00000033461	SRSF11	65	78.824	Saimiri_boliviensis_boliviensis
ENSSLDG00000015477	-	80	91.026	ENSSFOG00015016086	-	71	91.026	Scleropages_formosus
ENSSLDG00000015477	-	88	65.116	ENSSDUG00000010395	-	85	65.116	Seriola_dumerili
ENSSLDG00000015477	-	96	85.106	ENSSPAG00000016483	-	73	85.106	Stegastes_partitus
ENSSLDG00000015477	-	88	66.279	ENSSPAG00000022310	-	87	66.279	Stegastes_partitus
ENSSLDG00000015477	-	88	62.791	ENSTRUG00000022058	-	70	62.791	Takifugu_rubripes
ENSSLDG00000015477	-	84	81.707	ENSUAMG00000008403	-	65	80.000	Ursus_americanus
ENSSLDG00000015477	-	83	71.605	ENSUAMG00000022662	-	74	71.605	Ursus_americanus
ENSSLDG00000015477	-	85	71.084	ENSVVUG00000005888	-	83	71.084	Vulpes_vulpes
ENSSLDG00000015477	-	84	67.073	ENSXCOG00000017792	-	64	67.073	Xiphophorus_couchianus
ENSSLDG00000015477	-	86	95.238	ENSXCOG00000003220	-	72	95.238	Xiphophorus_couchianus
ENSSLDG00000015477	-	87	89.412	ENSXCOG00000015127	-	91	89.412	Xiphophorus_couchianus
ENSSLDG00000015477	-	93	86.813	ENSXMAG00000019180	SRSF11	60	86.813	Xiphophorus_maculatus
ENSSLDG00000015477	-	84	67.073	ENSXMAG00000028210	-	67	67.073	Xiphophorus_maculatus