EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000015492 (Gene tree)
Gene ID: -
Gene Symbol: vars2
Alias: si:ch211-152p11.2
Full Name: valyl-tRNA synthetase 2%2C mitochondrial
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 23271 bases
Position: chrPEQF01099431.1:24912-48182
Accession: 111645604
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000020030	tRNA-synt_1g	PF09334.11	7.8e-16	1	1
ENSSLDP00000020066	tRNA-synt_1g	PF09334.11	3.2e-14	1	1
ENSSLDP00000020030	Anticodon_1	PF08264.13	3.6e-34	1	1
ENSSLDP00000020066	Anticodon_1	PF08264.13	3.9e-34	1	1
ENSSLDP00000020030	tRNA-synt_1	PF00133.22	5.3e-199	1	1
ENSSLDP00000020066	tRNA-synt_1	PF00133.22	3.4e-196	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000020699	-	3165	-	ENSSLDP00000020030	1054 (aa)	-	-
ENSSLDT00000020736	-	3162	XM_023394858	ENSSLDP00000020066	1053 (aa)	XP_023250626	-

Gene Model

Click here to download ENSSLDG00000015492's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000015492's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000015492	vars2	92	49.491	ENSSLDG00000025316	vars	76	49.491

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000015492	vars2	100	82.212	ENSAPOG00000007396	vars2	100	81.935	Acanthochromis_polyacanthus
ENSSLDG00000015492	vars2	95	51.149	ENSAMEG00000012997	VARS2	88	53.292	Ailuropoda_melanoleuca
ENSSLDG00000015492	vars2	100	81.139	ENSACIG00000004344	vars2	99	80.672	Amphilophus_citrinellus
ENSSLDG00000015492	vars2	100	81.659	ENSAOCG00000000476	vars2	100	81.290	Amphiprion_ocellaris
ENSSLDG00000015492	vars2	100	81.567	ENSAPEG00000008646	vars2	97	81.198	Amphiprion_percula
ENSSLDG00000015492	vars2	100	83.565	ENSATEG00000012291	vars2	100	83.565	Anabas_testudineus
ENSSLDG00000015492	vars2	96	53.224	ENSACAG00000022093	VARS2	90	55.025	Anolis_carolinensis
ENSSLDG00000015492	vars2	97	50.143	ENSANAG00000038018	VARS2	90	51.955	Aotus_nancymaae
ENSSLDG00000015492	vars2	100	78.401	ENSACLG00000018673	vars2	100	78.125	Astatotilapia_calliptera
ENSSLDG00000015492	vars2	95	70.946	ENSAMXG00000017773	vars2	90	74.783	Astyanax_mexicanus
ENSSLDG00000015492	vars2	97	51.100	ENSBTAG00000010698	VARS2	90	53.074	Bos_taurus
ENSSLDG00000015492	vars2	97	49.952	ENSCJAG00000019826	VARS2	91	51.689	Callithrix_jacchus
ENSSLDG00000015492	vars2	96	51.152	ENSCAFG00000000454	VARS2	90	53.244	Canis_familiaris
ENSSLDG00000015492	vars2	83	56.430	ENSCAFG00020019387	VARS2	86	58.293	Canis_lupus_dingo
ENSSLDG00000015492	vars2	95	51.344	ENSCHIG00000007847	VARS2	91	53.279	Capra_hircus
ENSSLDG00000015492	vars2	96	51.810	ENSTSYG00000009904	VARS2	91	53.462	Carlito_syrichta
ENSSLDG00000015492	vars2	89	52.295	ENSCAPG00000017770	VARS2	98	52.559	Cavia_aperea
ENSSLDG00000015492	vars2	97	50.428	ENSCPOG00000021834	VARS2	90	52.664	Cavia_porcellus
ENSSLDG00000015492	vars2	97	50.143	ENSCCAG00000037907	VARS2	90	52.111	Cebus_capucinus
ENSSLDG00000015492	vars2	96	50.430	ENSCATG00000032554	VARS2	91	52.497	Cercocebus_atys
ENSSLDG00000015492	vars2	97	51.434	ENSCLAG00000002889	VARS2	91	52.971	Chinchilla_lanigera
ENSSLDG00000015492	vars2	96	50.716	ENSCSAG00000008327	VARS2	91	52.497	Chlorocebus_sabaeus
ENSSLDG00000015492	vars2	90	55.904	ENSCPBG00000021502	VARS2	85	65.046	Chrysemys_picta_bellii
ENSSLDG00000015492	vars2	96	50.621	ENSCANG00000014991	VARS2	90	52.294	Colobus_angolensis_palliatus
ENSSLDG00000015492	vars2	96	51.834	ENSCGRG00001021535	Vars2	90	53.484	Cricetulus_griseus_chok1gshd
ENSSLDG00000015492	vars2	96	51.834	ENSCGRG00000014112	Vars2	90	53.484	Cricetulus_griseus_crigri
ENSSLDG00000015492	vars2	99	69.188	ENSCSEG00000015432	vars2	99	77.483	Cynoglossus_semilaevis
ENSSLDG00000015492	vars2	66	79.632	ENSCVAG00000017765	vars2	98	79.632	Cyprinodon_variegatus
ENSSLDG00000015492	vars2	99	69.757	ENSDARG00000056717	vars2	100	69.663	Danio_rerio
ENSSLDG00000015492	vars2	81	50.349	ENSDORG00000008516	Vars2	92	50.883	Dipodomys_ordii
ENSSLDG00000015492	vars2	98	44.939	ENSETEG00000014844	VARS2	90	47.664	Echinops_telfairi
ENSSLDG00000015492	vars2	95	50.812	ENSEASG00005019997	VARS2	94	56.153	Equus_asinus_asinus
ENSSLDG00000015492	vars2	95	51.094	ENSECAG00000018202	VARS2	91	53.381	Equus_caballus
ENSSLDG00000015492	vars2	64	59.804	ENSEEUG00000012591	-	62	59.804	Erinaceus_europaeus
ENSSLDG00000015492	vars2	99	69.457	ENSELUG00000017824	vars2	99	69.089	Esox_lucius
ENSSLDG00000015492	vars2	97	50.667	ENSFCAG00000010531	VARS2	90	53.443	Felis_catus
ENSSLDG00000015492	vars2	97	50.427	ENSFDAG00000017216	VARS2	90	52.152	Fukomys_damarensis
ENSSLDG00000015492	vars2	93	73.579	ENSFHEG00000013932	vars2	98	73.154	Fundulus_heteroclitus
ENSSLDG00000015492	vars2	89	73.890	ENSGMOG00000018960	vars2	98	73.890	Gadus_morhua
ENSSLDG00000015492	vars2	93	77.576	ENSGAFG00000004737	vars2	96	77.576	Gambusia_affinis
ENSSLDG00000015492	vars2	93	81.568	ENSGACG00000001464	vars2	98	81.568	Gasterosteus_aculeatus
ENSSLDG00000015492	vars2	92	55.430	ENSGAGG00000011652	VARS2	98	55.430	Gopherus_agassizii
ENSSLDG00000015492	vars2	97	50.336	ENSGGOG00000014587	VARS2	91	52.396	Gorilla_gorilla
ENSSLDG00000015492	vars2	99	77.944	ENSHBUG00000002448	vars2	100	77.664	Haplochromis_burtoni
ENSSLDG00000015492	vars2	97	50.096	ENSHGLG00000012886	VARS2	87	52.459	Heterocephalus_glaber_female
ENSSLDG00000015492	vars2	97	50.000	ENSHGLG00100016535	VARS2	91	52.308	Heterocephalus_glaber_male
ENSSLDG00000015492	vars2	70	77.480	ENSHCOG00000017907	vars2	99	77.480	Hippocampus_comes
ENSSLDG00000015492	vars2	92	74.642	ENSIPUG00000015573	Vars2	91	74.642	Ictalurus_punctatus
ENSSLDG00000015492	vars2	97	50.095	ENSSTOG00000009924	VARS2	90	52.049	Ictidomys_tridecemlineatus
ENSSLDG00000015492	vars2	97	49.905	ENSJJAG00000011144	Vars2	90	52.094	Jaculus_jaculus
ENSSLDG00000015492	vars2	99	76.930	ENSKMAG00000001393	vars2	99	76.746	Kryptolebias_marmoratus
ENSSLDG00000015492	vars2	53	84.767	ENSLBEG00000005480	-	81	85.401	Labrus_bergylta
ENSSLDG00000015492	vars2	99	78.204	ENSLBEG00000011949	vars2	99	78.204	Labrus_bergylta
ENSSLDG00000015492	vars2	95	49.856	ENSLACG00000001576	-	94	51.316	Latimeria_chalumnae
ENSSLDG00000015492	vars2	98	50.942	ENSLAFG00000015183	VARS2	91	53.024	Loxodonta_africana
ENSSLDG00000015492	vars2	96	50.143	ENSMFAG00000042367	VARS2	91	52.192	Macaca_fascicularis
ENSSLDG00000015492	vars2	96	50.239	ENSMMUG00000018609	VARS2	91	52.294	Macaca_mulatta
ENSSLDG00000015492	vars2	96	50.239	ENSMNEG00000043163	VARS2	91	52.294	Macaca_nemestrina
ENSSLDG00000015492	vars2	96	50.334	ENSMLEG00000041728	VARS2	89	52.497	Mandrillus_leucophaeus
ENSSLDG00000015492	vars2	99	80.684	ENSMAMG00000020339	vars2	99	80.684	Mastacembelus_armatus
ENSSLDG00000015492	vars2	100	78.309	ENSMZEG00005017669	vars2	100	78.033	Maylandia_zebra
ENSSLDG00000015492	vars2	97	51.194	ENSMAUG00000018946	Vars2	90	53.429	Mesocricetus_auratus
ENSSLDG00000015492	vars2	81	56.178	ENSMICG00000005365	VARS2	89	59.153	Microcebus_murinus
ENSSLDG00000015492	vars2	91	57.678	ENSMOCG00000014607	Vars2	89	60.739	Microtus_ochrogaster
ENSSLDG00000015492	vars2	100	79.194	ENSMMOG00000012122	vars2	100	79.100	Mola_mola
ENSSLDG00000015492	vars2	94	50.295	ENSMODG00000015848	VARS2	89	51.373	Monodelphis_domestica
ENSSLDG00000015492	vars2	99	81.384	ENSMALG00000009217	vars2	98	83.215	Monopterus_albus
ENSSLDG00000015492	vars2	97	51.530	MGP_CAROLIEiJ_G0021529	Vars2	97	56.106	Mus_caroli
ENSSLDG00000015492	vars2	97	51.052	ENSMUSG00000038838	Vars2	96	55.929	Mus_musculus
ENSSLDG00000015492	vars2	97	51.052	MGP_PahariEiJ_G0020523	Vars2	93	57.038	Mus_pahari
ENSSLDG00000015492	vars2	97	51.052	MGP_SPRETEiJ_G0022436	Vars2	97	55.752	Mus_spretus
ENSSLDG00000015492	vars2	95	51.440	ENSMPUG00000011643	VARS2	90	53.649	Mustela_putorius_furo
ENSSLDG00000015492	vars2	93	52.495	ENSMLUG00000002356	VARS2	84	54.594	Myotis_lucifugus
ENSSLDG00000015492	vars2	97	46.991	ENSNGAG00000020607	Vars2	90	49.283	Nannospalax_galili
ENSSLDG00000015492	vars2	63	70.914	ENSNBRG00000001624	vars2	59	70.718	Neolamprologus_brichardi
ENSSLDG00000015492	vars2	96	49.807	ENSNLEG00000005625	VARS2	89	51.963	Nomascus_leucogenys
ENSSLDG00000015492	vars2	72	67.943	ENSMEUG00000014475	VARS2	80	67.943	Notamacropus_eugenii
ENSSLDG00000015492	vars2	89	48.869	ENSOPRG00000000682	VARS2	80	67.176	Ochotona_princeps
ENSSLDG00000015492	vars2	97	50.813	ENSODEG00000017965	VARS2	90	52.869	Octodon_degus
ENSSLDG00000015492	vars2	64	87.568	ENSONIG00000004734	vars2	98	59.880	Oreochromis_niloticus
ENSSLDG00000015492	vars2	69	45.935	ENSOANG00000000398	-	88	45.935	Ornithorhynchus_anatinus
ENSSLDG00000015492	vars2	97	47.610	ENSOCUG00000021496	VARS2	58	50.203	Oryctolagus_cuniculus
ENSSLDG00000015492	vars2	92	76.566	ENSORLG00000010632	vars2	91	76.566	Oryzias_latipes
ENSSLDG00000015492	vars2	92	76.667	ENSORLG00020018584	vars2	91	76.667	Oryzias_latipes_hni
ENSSLDG00000015492	vars2	92	76.667	ENSORLG00015010408	vars2	91	76.667	Oryzias_latipes_hsok
ENSSLDG00000015492	vars2	95	75.196	ENSOMEG00000008360	vars2	91	76.970	Oryzias_melastigma
ENSSLDG00000015492	vars2	96	50.665	ENSOGAG00000006087	VARS2	89	52.439	Otolemur_garnettii
ENSSLDG00000015492	vars2	95	50.815	ENSOARG00000010844	VARS2	89	52.712	Ovis_aries
ENSSLDG00000015492	vars2	97	50.528	ENSPPAG00000041141	VARS2	91	52.497	Pan_paniscus
ENSSLDG00000015492	vars2	95	51.437	ENSPPRG00000006751	VARS2	88	53.649	Panthera_pardus
ENSSLDG00000015492	vars2	95	51.390	ENSPTIG00000017799	VARS2	95	53.498	Panthera_tigris_altaica
ENSSLDG00000015492	vars2	97	50.528	ENSPTRG00000034497	VARS2	91	52.497	Pan_troglodytes
ENSSLDG00000015492	vars2	96	50.143	ENSPANG00000018481	VARS2	90	53.895	Papio_anubis
ENSSLDG00000015492	vars2	100	66.667	ENSPKIG00000011372	vars2	99	66.852	Paramormyrops_kingsleyae
ENSSLDG00000015492	vars2	60	63.836	ENSPSIG00000006206	VARS2	92	63.566	Pelodiscus_sinensis
ENSSLDG00000015492	vars2	99	71.846	ENSPMGG00000000465	vars2	96	73.674	Periophthalmus_magnuspinnatus
ENSSLDG00000015492	vars2	97	51.147	ENSPEMG00000014691	Vars2	90	53.176	Peromyscus_maniculatus_bairdii
ENSSLDG00000015492	vars2	94	50.780	ENSPCIG00000015040	VARS2	91	52.518	Phascolarctos_cinereus
ENSSLDG00000015492	vars2	92	78.036	ENSPFOG00000017616	vars2	91	78.036	Poecilia_formosa
ENSSLDG00000015492	vars2	99	74.146	ENSPLAG00000019778	vars2	92	77.901	Poecilia_latipinna
ENSSLDG00000015492	vars2	99	74.054	ENSPMEG00000011123	vars2	92	77.800	Poecilia_mexicana
ENSSLDG00000015492	vars2	97	66.635	ENSPREG00000014998	vars2	91	69.813	Poecilia_reticulata
ENSSLDG00000015492	vars2	96	50.525	ENSPPYG00000016424	VARS2	91	52.599	Pongo_abelii
ENSSLDG00000015492	vars2	64	55.000	ENSPCAG00000006946	VARS2	73	64.516	Procavia_capensis
ENSSLDG00000015492	vars2	97	50.048	ENSPCOG00000014839	VARS2	87	52.420	Propithecus_coquereli
ENSSLDG00000015492	vars2	98	50.427	ENSPVAG00000004197	VARS2	90	52.561	Pteropus_vampyrus
ENSSLDG00000015492	vars2	87	86.757	ENSPNYG00000010314	vars2	100	86.757	Pundamilia_nyererei
ENSSLDG00000015492	vars2	99	69.674	ENSPNAG00000026793	vars2	99	69.674	Pygocentrus_nattereri
ENSSLDG00000015492	vars2	97	50.574	ENSRNOG00000000833	Vars2	90	52.561	Rattus_norvegicus
ENSSLDG00000015492	vars2	96	50.525	ENSRBIG00000032725	VARS2	91	52.599	Rhinopithecus_bieti
ENSSLDG00000015492	vars2	96	50.430	ENSRROG00000043847	VARS2	91	52.497	Rhinopithecus_roxellana
ENSSLDG00000015492	vars2	97	49.018	ENSSBOG00000033240	VARS2	88	50.957	Saimiri_boliviensis_boliviensis
ENSSLDG00000015492	vars2	97	50.902	ENSSHAG00000009307	VARS2	91	53.063	Sarcophilus_harrisii
ENSSLDG00000015492	vars2	98	67.395	ENSSFOG00015016187	vars2	95	68.182	Scleropages_formosus
ENSSLDG00000015492	vars2	100	82.446	ENSSMAG00000020842	vars2	99	82.446	Scophthalmus_maximus
ENSSLDG00000015492	vars2	100	95.564	ENSSDUG00000011598	vars2	100	95.564	Seriola_dumerili
ENSSLDG00000015492	vars2	51	62.222	ENSSARG00000003786	-	61	62.222	Sorex_araneus
ENSSLDG00000015492	vars2	79	61.124	ENSSPUG00000014700	VARS2	87	61.124	Sphenodon_punctatus
ENSSLDG00000015492	vars2	99	80.737	ENSSPAG00000004654	vars2	100	80.076	Stegastes_partitus
ENSSLDG00000015492	vars2	95	51.631	ENSSSCG00000001384	VARS2	88	57.600	Sus_scrofa
ENSSLDG00000015492	vars2	99	73.769	ENSTRUG00000005264	vars2	99	73.988	Takifugu_rubripes
ENSSLDG00000015492	vars2	96	72.789	ENSTNIG00000005916	vars2	95	72.833	Tetraodon_nigroviridis
ENSSLDG00000015492	vars2	78	51.482	ENSTTRG00000012243	VARS2	74	65.116	Tursiops_truncatus
ENSSLDG00000015492	vars2	97	51.292	ENSUAMG00000026124	VARS2	99	53.548	Ursus_americanus
ENSSLDG00000015492	vars2	97	51.245	ENSUMAG00000019894	VARS2	90	53.279	Ursus_maritimus
ENSSLDG00000015492	vars2	97	51.054	ENSVVUG00000010754	VARS2	85	53.347	Vulpes_vulpes
ENSSLDG00000015492	vars2	87	52.784	ENSXETG00000003036	vars2	97	52.704	Xenopus_tropicalis
ENSSLDG00000015492	vars2	97	77.286	ENSXCOG00000003455	vars2	92	81.178	Xiphophorus_couchianus
ENSSLDG00000015492	vars2	99	76.639	ENSXMAG00000013523	vars2	99	76.454	Xiphophorus_maculatus