EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSLDG00000015555 (Gene tree)
Gene ID: -
Gene Symbol: thoc1
Alias: p84
Full Name: THO complex 1
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 15731 bases
Position: chrPEQF01098661.1:1302677-1318407
Accession: 111653277
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000019928	efThoc1	PF11957.8	7.4e-143	1	1
ENSSLDP00000019904	efThoc1	PF11957.8	2.3e-131	1	2
ENSSLDP00000019904	efThoc1	PF11957.8	2.3e-131	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000020573	-	1941	-	ENSSLDP00000019904	646 (aa)	-	-
ENSSLDT00000020596	-	6514	XM_023403792	ENSSLDP00000019928	654 (aa)	XP_023259560	UPI000C6F7062

Gene Model

Click here to download ENSSLDG00000015555's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000015555's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000015555	thoc1	99	72.965	ENSG00000079134	THOC1	99	77.574	Homo_sapiens
ENSSLDG00000015555	thoc1	99	73.118	ENSAMEG00000006645	THOC1	98	73.118	Ailuropoda_melanoleuca
ENSSLDG00000015555	thoc1	94	91.694	ENSACIG00000019392	thoc1	95	91.694	Amphilophus_citrinellus
ENSSLDG00000015555	thoc1	100	89.450	ENSAOCG00000008391	thoc1	97	94.030	Amphiprion_ocellaris
ENSSLDG00000015555	thoc1	100	95.107	ENSAPEG00000001093	thoc1	100	95.107	Amphiprion_percula
ENSSLDG00000015555	thoc1	100	95.260	ENSATEG00000004783	thoc1	100	95.260	Anabas_testudineus
ENSSLDG00000015555	thoc1	99	72.477	ENSAPLG00000016149	THOC1	98	72.477	Anas_platyrhynchos
ENSSLDG00000015555	thoc1	99	73.476	ENSACAG00000008307	THOC1	97	72.866	Anolis_carolinensis
ENSSLDG00000015555	thoc1	99	72.340	ENSANAG00000033200	THOC1	98	72.340	Aotus_nancymaae
ENSSLDG00000015555	thoc1	100	94.037	ENSACLG00000016836	thoc1	100	94.037	Astatotilapia_calliptera
ENSSLDG00000015555	thoc1	94	77.389	ENSAMXG00000014708	thoc1	98	76.715	Astyanax_mexicanus
ENSSLDG00000015555	thoc1	99	73.733	ENSBTAG00000019215	THOC1	98	73.733	Bos_taurus
ENSSLDG00000015555	thoc1	65	37.011	WBGene00020172	thoc-1	65	35.763	Caenorhabditis_elegans
ENSSLDG00000015555	thoc1	99	73.118	ENSCJAG00000020450	THOC1	98	73.118	Callithrix_jacchus
ENSSLDG00000015555	thoc1	99	73.272	ENSCAFG00000018324	THOC1	98	73.272	Canis_familiaris
ENSSLDG00000015555	thoc1	99	73.272	ENSCAFG00020017894	THOC1	98	73.272	Canis_lupus_dingo
ENSSLDG00000015555	thoc1	99	73.733	ENSCHIG00000015399	THOC1	98	74.646	Capra_hircus
ENSSLDG00000015555	thoc1	99	72.965	ENSTSYG00000010585	THOC1	98	72.965	Carlito_syrichta
ENSSLDG00000015555	thoc1	97	53.292	ENSCAPG00000016270	THOC1	97	56.672	Cavia_aperea
ENSSLDG00000015555	thoc1	99	72.043	ENSCPOG00000000959	THOC1	98	72.043	Cavia_porcellus
ENSSLDG00000015555	thoc1	99	73.118	ENSCCAG00000025766	THOC1	98	73.118	Cebus_capucinus
ENSSLDG00000015555	thoc1	99	70.968	ENSCATG00000028180	THOC1	96	77.746	Cercocebus_atys
ENSSLDG00000015555	thoc1	97	73.701	ENSCLAG00000009117	THOC1	99	73.701	Chinchilla_lanigera
ENSSLDG00000015555	thoc1	99	73.118	ENSCSAG00000017631	THOC1	98	73.118	Chlorocebus_sabaeus
ENSSLDG00000015555	thoc1	79	77.143	ENSCHOG00000010609	THOC1	78	75.918	Choloepus_hoffmanni
ENSSLDG00000015555	thoc1	99	74.387	ENSCPBG00000027558	THOC1	99	74.387	Chrysemys_picta_bellii
ENSSLDG00000015555	thoc1	70	48.822	ENSCING00000007663	-	93	48.180	Ciona_intestinalis
ENSSLDG00000015555	thoc1	94	47.627	ENSCSAVG00000010649	-	100	47.468	Ciona_savignyi
ENSSLDG00000015555	thoc1	99	72.965	ENSCANG00000034265	THOC1	96	78.070	Colobus_angolensis_palliatus
ENSSLDG00000015555	thoc1	99	72.811	ENSCGRG00001016464	Thoc1	98	72.811	Cricetulus_griseus_chok1gshd
ENSSLDG00000015555	thoc1	89	60.136	ENSCGRG00000003390	-	97	60.136	Cricetulus_griseus_crigri
ENSSLDG00000015555	thoc1	98	72.868	ENSCGRG00000010269	-	99	73.701	Cricetulus_griseus_crigri
ENSSLDG00000015555	thoc1	99	88.906	ENSCSEG00000012486	thoc1	99	89.389	Cynoglossus_semilaevis
ENSSLDG00000015555	thoc1	100	89.755	ENSCVAG00000020600	thoc1	100	89.755	Cyprinodon_variegatus
ENSSLDG00000015555	thoc1	99	84.049	ENSDARG00000088246	thoc1	99	84.049	Danio_rerio
ENSSLDG00000015555	thoc1	99	73.077	ENSDNOG00000019217	THOC1	98	73.077	Dasypus_novemcinctus
ENSSLDG00000015555	thoc1	98	69.207	ENSDORG00000008060	Thoc1	98	69.921	Dipodomys_ordii
ENSSLDG00000015555	thoc1	80	41.636	FBgn0037382	Hpr1	74	41.410	Drosophila_melanogaster
ENSSLDG00000015555	thoc1	90	56.367	ENSETEG00000004165	THOC1	98	56.367	Echinops_telfairi
ENSSLDG00000015555	thoc1	92	64.000	ENSEBUG00000005998	thoc1	97	64.775	Eptatretus_burgeri
ENSSLDG00000015555	thoc1	99	72.965	ENSEASG00005002549	THOC1	94	72.965	Equus_asinus_asinus
ENSSLDG00000015555	thoc1	99	73.425	ENSECAG00000009267	THOC1	88	73.425	Equus_caballus
ENSSLDG00000015555	thoc1	79	57.447	ENSEEUG00000012214	-	81	57.447	Erinaceus_europaeus
ENSSLDG00000015555	thoc1	100	88.584	ENSELUG00000023277	thoc1	99	88.720	Esox_lucius
ENSSLDG00000015555	thoc1	99	73.579	ENSFCAG00000022454	THOC1	85	73.579	Felis_catus
ENSSLDG00000015555	thoc1	97	73.594	ENSFALG00000006205	THOC1	99	73.594	Ficedula_albicollis
ENSSLDG00000015555	thoc1	98	73.406	ENSFDAG00000006842	THOC1	99	73.406	Fukomys_damarensis
ENSSLDG00000015555	thoc1	100	90.979	ENSFHEG00000008841	thoc1	100	90.979	Fundulus_heteroclitus
ENSSLDG00000015555	thoc1	99	88.650	ENSGMOG00000011486	thoc1	99	88.650	Gadus_morhua
ENSSLDG00000015555	thoc1	99	73.466	ENSGALG00000014915	THOC1	99	72.576	Gallus_gallus
ENSSLDG00000015555	thoc1	100	90.214	ENSGAFG00000021464	thoc1	100	90.214	Gambusia_affinis
ENSSLDG00000015555	thoc1	100	92.661	ENSGACG00000017361	thoc1	100	92.661	Gasterosteus_aculeatus
ENSSLDG00000015555	thoc1	99	74.732	ENSGAGG00000021230	-	97	74.732	Gopherus_agassizii
ENSSLDG00000015555	thoc1	99	73.118	ENSGGOG00000003013	THOC1	98	73.118	Gorilla_gorilla
ENSSLDG00000015555	thoc1	100	94.343	ENSHBUG00000009096	thoc1	100	94.343	Haplochromis_burtoni
ENSSLDG00000015555	thoc1	99	73.579	ENSHGLG00000003712	-	98	73.579	Heterocephalus_glaber_female
ENSSLDG00000015555	thoc1	78	64.000	ENSHGLG00000009264	-	98	70.270	Heterocephalus_glaber_female
ENSSLDG00000015555	thoc1	77	59.043	ENSHGLG00100002225	-	98	70.857	Heterocephalus_glaber_male
ENSSLDG00000015555	thoc1	99	73.425	ENSHGLG00100003570	THOC1	98	73.425	Heterocephalus_glaber_male
ENSSLDG00000015555	thoc1	94	79.818	ENSIPUG00000005306	thoc1	99	78.871	Ictalurus_punctatus
ENSSLDG00000015555	thoc1	99	72.965	ENSSTOG00000006484	THOC1	98	72.965	Ictidomys_tridecemlineatus
ENSSLDG00000015555	thoc1	53	74.128	ENSJJAG00000014893	-	96	74.493	Jaculus_jaculus
ENSSLDG00000015555	thoc1	100	92.202	ENSKMAG00000003904	thoc1	99	92.343	Kryptolebias_marmoratus
ENSSLDG00000015555	thoc1	100	92.813	ENSLBEG00000020372	thoc1	98	92.813	Labrus_bergylta
ENSSLDG00000015555	thoc1	99	74.080	ENSLACG00000014869	THOC1	99	73.773	Latimeria_chalumnae
ENSSLDG00000015555	thoc1	100	84.323	ENSLOCG00000002097	thoc1	99	84.018	Lepisosteus_oculatus
ENSSLDG00000015555	thoc1	99	73.118	ENSLAFG00000009585	THOC1	98	73.118	Loxodonta_africana
ENSSLDG00000015555	thoc1	99	73.118	ENSMFAG00000041520	THOC1	98	73.118	Macaca_fascicularis
ENSSLDG00000015555	thoc1	99	73.118	ENSMMUG00000004662	THOC1	98	73.118	Macaca_mulatta
ENSSLDG00000015555	thoc1	99	73.118	ENSMNEG00000040177	THOC1	98	73.118	Macaca_nemestrina
ENSSLDG00000015555	thoc1	99	73.118	ENSMLEG00000034201	THOC1	98	73.118	Mandrillus_leucophaeus
ENSSLDG00000015555	thoc1	96	92.026	ENSMAMG00000016747	thoc1	100	92.026	Mastacembelus_armatus
ENSSLDG00000015555	thoc1	100	94.037	ENSMZEG00005024609	thoc1	100	94.037	Maylandia_zebra
ENSSLDG00000015555	thoc1	97	73.668	ENSMGAG00000009811	THOC1	99	73.668	Meleagris_gallopavo
ENSSLDG00000015555	thoc1	99	72.350	ENSMAUG00000010272	Thoc1	98	72.350	Mesocricetus_auratus
ENSSLDG00000015555	thoc1	99	73.272	ENSMICG00000027200	THOC1	98	73.272	Microcebus_murinus
ENSSLDG00000015555	thoc1	99	63.902	ENSMOCG00000014924	-	95	63.287	Microtus_ochrogaster
ENSSLDG00000015555	thoc1	99	71.582	ENSMOCG00000014536	-	85	71.582	Microtus_ochrogaster
ENSSLDG00000015555	thoc1	93	92.484	ENSMMOG00000011772	thoc1	100	92.484	Mola_mola
ENSSLDG00000015555	thoc1	99	72.298	ENSMODG00000021482	THOC1	98	72.298	Monodelphis_domestica
ENSSLDG00000015555	thoc1	100	93.272	ENSMALG00000021872	thoc1	100	93.272	Monopterus_albus
ENSSLDG00000015555	thoc1	99	72.350	MGP_CAROLIEiJ_G0021989	Thoc1	98	72.350	Mus_caroli
ENSSLDG00000015555	thoc1	99	72.197	ENSMUSG00000024287	Thoc1	98	72.197	Mus_musculus
ENSSLDG00000015555	thoc1	99	72.197	MGP_PahariEiJ_G0018726	Thoc1	98	72.197	Mus_pahari
ENSSLDG00000015555	thoc1	99	72.197	MGP_SPRETEiJ_G0022905	Thoc1	98	72.197	Mus_spretus
ENSSLDG00000015555	thoc1	99	73.118	ENSMPUG00000005448	THOC1	98	73.118	Mustela_putorius_furo
ENSSLDG00000015555	thoc1	61	66.917	ENSMLUG00000024912	-	100	66.917	Myotis_lucifugus
ENSSLDG00000015555	thoc1	99	72.350	ENSMLUG00000004090	-	98	72.350	Myotis_lucifugus
ENSSLDG00000015555	thoc1	90	67.282	ENSMLUG00000027965	-	99	67.617	Myotis_lucifugus
ENSSLDG00000015555	thoc1	97	58.242	ENSNGAG00000008061	-	97	58.242	Nannospalax_galili
ENSSLDG00000015555	thoc1	99	72.965	ENSNGAG00000001401	-	98	72.965	Nannospalax_galili
ENSSLDG00000015555	thoc1	98	91.850	ENSNBRG00000005991	thoc1	97	91.850	Neolamprologus_brichardi
ENSSLDG00000015555	thoc1	99	73.118	ENSNLEG00000006835	THOC1	98	73.118	Nomascus_leucogenys
ENSSLDG00000015555	thoc1	89	77.302	ENSMEUG00000009756	THOC1	91	72.532	Notamacropus_eugenii
ENSSLDG00000015555	thoc1	99	58.986	ENSOPRG00000001108	THOC1	98	58.986	Ochotona_princeps
ENSSLDG00000015555	thoc1	99	67.435	ENSODEG00000006623	THOC1	98	67.435	Octodon_degus
ENSSLDG00000015555	thoc1	100	94.037	ENSONIG00000009440	thoc1	98	94.163	Oreochromis_niloticus
ENSSLDG00000015555	thoc1	99	73.272	ENSOCUG00000011601	THOC1	98	73.272	Oryctolagus_cuniculus
ENSSLDG00000015555	thoc1	100	93.119	ENSORLG00000017629	thoc1	100	93.119	Oryzias_latipes
ENSSLDG00000015555	thoc1	100	93.272	ENSORLG00020007567	thoc1	100	93.272	Oryzias_latipes_hni
ENSSLDG00000015555	thoc1	100	93.119	ENSORLG00015007356	thoc1	100	93.119	Oryzias_latipes_hsok
ENSSLDG00000015555	thoc1	100	91.896	ENSOMEG00000008200	thoc1	100	91.743	Oryzias_melastigma
ENSSLDG00000015555	thoc1	99	70.046	ENSOGAG00000000470	THOC1	98	70.046	Otolemur_garnettii
ENSSLDG00000015555	thoc1	98	74.143	ENSOARG00000009238	THOC1	96	74.143	Ovis_aries
ENSSLDG00000015555	thoc1	99	73.118	ENSPPAG00000031812	THOC1	98	73.118	Pan_paniscus
ENSSLDG00000015555	thoc1	99	72.965	ENSPPRG00000023794	THOC1	96	78.613	Panthera_pardus
ENSSLDG00000015555	thoc1	99	72.965	ENSPTIG00000007469	THOC1	96	78.613	Panthera_tigris_altaica
ENSSLDG00000015555	thoc1	99	72.188	ENSPTRG00000009816	THOC1	98	72.188	Pan_troglodytes
ENSSLDG00000015555	thoc1	99	72.214	ENSPANG00000008665	THOC1	98	72.214	Papio_anubis
ENSSLDG00000015555	thoc1	100	84.885	ENSPKIG00000005906	thoc1	99	85.780	Paramormyrops_kingsleyae
ENSSLDG00000015555	thoc1	81	76.515	ENSPSIG00000007691	THOC1	97	76.515	Pelodiscus_sinensis
ENSSLDG00000015555	thoc1	94	86.935	ENSPMGG00000008279	thoc1	95	86.935	Periophthalmus_magnuspinnatus
ENSSLDG00000015555	thoc1	99	72.350	ENSPEMG00000021789	Thoc1	98	72.350	Peromyscus_maniculatus_bairdii
ENSSLDG00000015555	thoc1	74	72.802	ENSPCIG00000026942	THOC1	97	74.388	Phascolarctos_cinereus
ENSSLDG00000015555	thoc1	100	90.367	ENSPFOG00000011673	thoc1	100	90.367	Poecilia_formosa
ENSSLDG00000015555	thoc1	100	90.673	ENSPLAG00000019648	thoc1	100	90.673	Poecilia_latipinna
ENSSLDG00000015555	thoc1	100	90.520	ENSPMEG00000007083	thoc1	100	90.520	Poecilia_mexicana
ENSSLDG00000015555	thoc1	100	90.673	ENSPREG00000006719	thoc1	100	90.673	Poecilia_reticulata
ENSSLDG00000015555	thoc1	74	76.543	ENSPPYG00000009049	-	98	76.543	Pongo_abelii
ENSSLDG00000015555	thoc1	91	74.120	ENSPCAG00000005320	THOC1	90	74.120	Procavia_capensis
ENSSLDG00000015555	thoc1	99	72.504	ENSPCOG00000009234	THOC1	98	72.504	Propithecus_coquereli
ENSSLDG00000015555	thoc1	99	71.889	ENSPVAG00000004007	THOC1	98	71.889	Pteropus_vampyrus
ENSSLDG00000015555	thoc1	100	94.343	ENSPNYG00000019152	thoc1	100	94.343	Pundamilia_nyererei
ENSSLDG00000015555	thoc1	99	84.227	ENSPNAG00000023390	thoc1	99	83.920	Pygocentrus_nattereri
ENSSLDG00000015555	thoc1	81	60.424	ENSRNOG00000015332	Thoc1	95	60.424	Rattus_norvegicus
ENSSLDG00000015555	thoc1	99	72.340	ENSRBIG00000033738	THOC1	99	74.697	Rhinopithecus_bieti
ENSSLDG00000015555	thoc1	99	73.118	ENSRROG00000044988	THOC1	96	78.070	Rhinopithecus_roxellana
ENSSLDG00000015555	thoc1	99	72.811	ENSSBOG00000016556	THOC1	98	72.811	Saimiri_boliviensis_boliviensis
ENSSLDG00000015555	thoc1	99	73.272	ENSSHAG00000014829	THOC1	98	73.272	Sarcophilus_harrisii
ENSSLDG00000015555	thoc1	100	87.615	ENSSFOG00015021527	thoc1	100	87.615	Scleropages_formosus
ENSSLDG00000015555	thoc1	100	90.673	ENSSMAG00000018465	thoc1	99	90.673	Scophthalmus_maximus
ENSSLDG00000015555	thoc1	100	99.694	ENSSDUG00000016810	thoc1	100	99.694	Seriola_dumerili
ENSSLDG00000015555	thoc1	87	74.131	ENSSARG00000006910	THOC1	86	74.131	Sorex_araneus
ENSSLDG00000015555	thoc1	98	73.250	ENSSPUG00000007238	THOC1	98	72.769	Sphenodon_punctatus
ENSSLDG00000015555	thoc1	100	89.024	ENSSPAG00000018847	thoc1	99	89.024	Stegastes_partitus
ENSSLDG00000015555	thoc1	99	73.425	ENSSSCG00000025653	THOC1	93	73.425	Sus_scrofa
ENSSLDG00000015555	thoc1	99	73.773	ENSTGUG00000010204	THOC1	99	73.773	Taeniopygia_guttata
ENSSLDG00000015555	thoc1	100	90.979	ENSTRUG00000013518	thoc1	100	90.979	Takifugu_rubripes
ENSSLDG00000015555	thoc1	100	90.367	ENSTNIG00000008473	thoc1	99	90.367	Tetraodon_nigroviridis
ENSSLDG00000015555	thoc1	99	66.052	ENSTBEG00000016920	THOC1	98	66.052	Tupaia_belangeri
ENSSLDG00000015555	thoc1	99	67.281	ENSTTRG00000016664	THOC1	98	67.281	Tursiops_truncatus
ENSSLDG00000015555	thoc1	99	73.272	ENSUAMG00000002527	THOC1	98	73.511	Ursus_americanus
ENSSLDG00000015555	thoc1	99	73.272	ENSUMAG00000019693	THOC1	98	73.272	Ursus_maritimus
ENSSLDG00000015555	thoc1	67	66.939	ENSVPAG00000003726	-	66	66.939	Vicugna_pacos
ENSSLDG00000015555	thoc1	99	73.272	ENSVVUG00000004384	THOC1	98	73.272	Vulpes_vulpes
ENSSLDG00000015555	thoc1	99	70.776	ENSXETG00000003155	thoc1	97	70.776	Xenopus_tropicalis
ENSSLDG00000015555	thoc1	89	91.161	ENSXCOG00000016085	thoc1	89	91.161	Xiphophorus_couchianus
ENSSLDG00000015555	thoc1	100	90.367	ENSXMAG00000002353	thoc1	100	90.367	Xiphophorus_maculatus