EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000015763 (Gene tree)
Gene ID: -
Gene Symbol: ddx39b
Alias: bat1|zgc:63773
Full Name: spliceosome RNA helicase DDX39B
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 13171 bases
Position: chrPEQF01099431.1:66421-79591
Accession: 111645609
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000020154	ResIII	PF04851.15	7.3e-07	1	1
ENSSLDP00000020154	DEAD	PF00270.29	6.6e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000020825	-	1727	XM_023394863	ENSSLDP00000020154	432 (aa)	XP_023250631	UPI000C6FBBF7

Gene Model

Click here to download ENSSLDG00000015763's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000015763's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000015763	ddx39b	90	71.907	ENSSLDG00000006386	-	93	71.907
ENSSLDG00000015763	ddx39b	91	37.500	ENSSLDG00000015202	eif4a2	92	37.760
ENSSLDG00000015763	ddx39b	85	30.688	ENSSLDG00000017107	zgc:193690	77	30.688
ENSSLDG00000015763	ddx39b	88	30.073	ENSSLDG00000002762	-	55	30.073
ENSSLDG00000015763	ddx39b	86	38.005	ENSSLDG00000011941	eif4a1b	91	38.108
ENSSLDG00000015763	ddx39b	76	38.182	ENSSLDG00000010112	eif4a3	85	37.910
ENSSLDG00000015763	ddx39b	88	36.675	ENSSLDG00000006167	ddx6	77	36.675
ENSSLDG00000015763	ddx39b	80	36.311	ENSSLDG00000018142	ddx47	69	36.311
ENSSLDG00000015763	ddx39b	80	90.173	ENSSLDG00000002882	-	100	90.173
ENSSLDG00000015763	ddx39b	100	88.426	ENSSLDG00000017643	DDX39A	100	88.194
ENSSLDG00000015763	ddx39b	86	31.266	ENSSLDG00000010264	DDX41	59	31.266
ENSSLDG00000015763	ddx39b	87	31.688	ENSSLDG00000009584	ddx19	78	31.771
ENSSLDG00000015763	ddx39b	86	31.926	ENSSLDG00000006958	ddx49	77	31.926
ENSSLDG00000015763	ddx39b	95	35.545	ENSSLDG00000007608	-	78	36.010
ENSSLDG00000015763	ddx39b	84	30.027	ENSSLDG00000024883	kif14	57	30.027
ENSSLDG00000015763	ddx39b	89	36.269	ENSSLDG00000000132	ddx61	78	36.269

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000015763	ddx39b	100	93.287	ENSG00000198563	DDX39B	100	93.056	Homo_sapiens
ENSSLDG00000015763	ddx39b	100	93.519	ENSAMEG00000009508	DDX39B	99	93.287	Ailuropoda_melanoleuca
ENSSLDG00000015763	ddx39b	99	97.190	ENSACIG00000004534	ddx39b	98	97.190	Amphilophus_citrinellus
ENSSLDG00000015763	ddx39b	100	97.454	ENSATEG00000012366	ddx39b	100	97.454	Anabas_testudineus
ENSSLDG00000015763	ddx39b	100	92.841	ENSACAG00000012240	DDX39B	100	92.379	Anolis_carolinensis
ENSSLDG00000015763	ddx39b	100	93.287	ENSANAG00000030372	DDX39B	100	93.056	Aotus_nancymaae
ENSSLDG00000015763	ddx39b	99	94.700	ENSACLG00000018759	ddx39b	99	94.700	Astatotilapia_calliptera
ENSSLDG00000015763	ddx39b	100	94.266	ENSAMXG00000017837	ddx39b	100	93.578	Astyanax_mexicanus
ENSSLDG00000015763	ddx39b	100	93.287	ENSBTAG00000014490	DDX39B	100	93.056	Bos_taurus
ENSSLDG00000015763	ddx39b	100	93.287	ENSCJAG00000003152	DDX39B	100	93.056	Callithrix_jacchus
ENSSLDG00000015763	ddx39b	100	93.519	ENSCAFG00000000509	DDX39B	100	95.806	Canis_familiaris
ENSSLDG00000015763	ddx39b	100	93.519	ENSCAFG00020020530	DDX39B	100	93.287	Canis_lupus_dingo
ENSSLDG00000015763	ddx39b	100	93.287	ENSCHIG00000004579	DDX39B	100	93.056	Capra_hircus
ENSSLDG00000015763	ddx39b	100	93.287	ENSTSYG00000010226	-	100	93.056	Carlito_syrichta
ENSSLDG00000015763	ddx39b	100	80.556	ENSTSYG00000029741	-	91	80.841	Carlito_syrichta
ENSSLDG00000015763	ddx39b	100	93.056	ENSCAPG00000010066	DDX39B	100	92.824	Cavia_aperea
ENSSLDG00000015763	ddx39b	100	93.056	ENSCPOG00000002335	DDX39B	100	92.824	Cavia_porcellus
ENSSLDG00000015763	ddx39b	100	93.287	ENSCCAG00000027897	DDX39B	100	93.056	Cebus_capucinus
ENSSLDG00000015763	ddx39b	99	84.382	ENSCATG00000043709	DDX39B	99	84.149	Cercocebus_atys
ENSSLDG00000015763	ddx39b	100	93.056	ENSCLAG00000014555	DDX39B	100	92.824	Chinchilla_lanigera
ENSSLDG00000015763	ddx39b	99	93.473	ENSCSAG00000008517	DDX39B	100	93.240	Chlorocebus_sabaeus
ENSSLDG00000015763	ddx39b	63	95.604	ENSCPBG00000014671	-	100	95.604	Chrysemys_picta_bellii
ENSSLDG00000015763	ddx39b	100	93.287	ENSCANG00000041217	DDX39B	100	93.056	Colobus_angolensis_palliatus
ENSSLDG00000015763	ddx39b	82	81.180	ENSCGRG00001021916	-	88	81.180	Cricetulus_griseus_chok1gshd
ENSSLDG00000015763	ddx39b	58	90.763	ENSCGRG00001017315	-	95	88.571	Cricetulus_griseus_chok1gshd
ENSSLDG00000015763	ddx39b	58	90.763	ENSCGRG00000012479	-	76	90.361	Cricetulus_griseus_crigri
ENSSLDG00000015763	ddx39b	100	94.253	ENSDARG00000036069	ddx39b	100	94.253	Danio_rerio
ENSSLDG00000015763	ddx39b	100	93.287	ENSDNOG00000010215	DDX39B	100	93.056	Dasypus_novemcinctus
ENSSLDG00000015763	ddx39b	88	94.180	ENSDORG00000004985	Ddx39b	100	93.915	Dipodomys_ordii
ENSSLDG00000015763	ddx39b	88	81.217	ENSETEG00000009649	DDX39B	87	80.688	Echinops_telfairi
ENSSLDG00000015763	ddx39b	100	93.287	ENSEASG00005017156	DDX39B	100	93.056	Equus_asinus_asinus
ENSSLDG00000015763	ddx39b	100	93.287	ENSECAG00000007750	DDX39B	100	93.056	Equus_caballus
ENSSLDG00000015763	ddx39b	100	94.676	ENSELUG00000017904	ddx39b	100	93.981	Esox_lucius
ENSSLDG00000015763	ddx39b	100	93.519	ENSFCAG00000004497	DDX39B	100	93.287	Felis_catus
ENSSLDG00000015763	ddx39b	100	93.056	ENSFDAG00000011074	DDX39B	100	92.824	Fukomys_damarensis
ENSSLDG00000015763	ddx39b	73	95.886	ENSGAGG00000001300	-	80	95.886	Gopherus_agassizii
ENSSLDG00000015763	ddx39b	100	93.287	ENSGGOG00000005989	DDX39B	100	93.056	Gorilla_gorilla
ENSSLDG00000015763	ddx39b	100	92.361	ENSHGLG00000019248	DDX39B	100	92.361	Heterocephalus_glaber_female
ENSSLDG00000015763	ddx39b	100	92.361	ENSHGLG00100011850	DDX39B	100	92.361	Heterocephalus_glaber_male
ENSSLDG00000015763	ddx39b	100	92.661	ENSIPUG00000015733	DDX39B	94	92.661	Ictalurus_punctatus
ENSSLDG00000015763	ddx39b	100	92.824	ENSSTOG00000012838	DDX39B	100	92.593	Ictidomys_tridecemlineatus
ENSSLDG00000015763	ddx39b	100	92.593	ENSJJAG00000005660	-	100	92.361	Jaculus_jaculus
ENSSLDG00000015763	ddx39b	99	81.265	ENSLBEG00000012254	ddx39b	99	81.265	Labrus_bergylta
ENSSLDG00000015763	ddx39b	65	81.139	ENSLBEG00000017177	-	81	81.139	Labrus_bergylta
ENSSLDG00000015763	ddx39b	100	84.475	ENSLACG00000002110	DDX39B	100	84.475	Latimeria_chalumnae
ENSSLDG00000015763	ddx39b	100	93.056	ENSLAFG00000014202	DDX39B	100	92.824	Loxodonta_africana
ENSSLDG00000015763	ddx39b	100	93.287	ENSMFAG00000034233	DDX39B	100	93.056	Macaca_fascicularis
ENSSLDG00000015763	ddx39b	100	93.287	ENSMMUG00000008839	DDX39B	100	93.056	Macaca_mulatta
ENSSLDG00000015763	ddx39b	100	93.287	ENSMNEG00000041059	DDX39B	100	93.056	Macaca_nemestrina
ENSSLDG00000015763	ddx39b	100	93.287	ENSMLEG00000043791	DDX39B	100	93.056	Mandrillus_leucophaeus
ENSSLDG00000015763	ddx39b	99	94.931	ENSMZEG00005017654	ddx39b	99	94.931	Maylandia_zebra
ENSSLDG00000015763	ddx39b	100	93.056	ENSMAUG00000008059	Ddx39b	100	92.824	Mesocricetus_auratus
ENSSLDG00000015763	ddx39b	100	93.287	ENSMICG00000017349	DDX39B	100	93.056	Microcebus_murinus
ENSSLDG00000015763	ddx39b	100	93.056	ENSMOCG00000011169	Ddx39b	100	92.824	Microtus_ochrogaster
ENSSLDG00000015763	ddx39b	88	93.684	ENSMODG00000015791	DDX39B	88	93.421	Monodelphis_domestica
ENSSLDG00000015763	ddx39b	100	93.056	ENSMUSG00000019432	Ddx39b	100	95.946	Mus_musculus
ENSSLDG00000015763	ddx39b	100	93.056	MGP_PahariEiJ_G0020513	Ddx39b	100	95.946	Mus_pahari
ENSSLDG00000015763	ddx39b	100	93.056	MGP_SPRETEiJ_G0022424	Ddx39b	100	92.824	Mus_spretus
ENSSLDG00000015763	ddx39b	100	93.519	ENSMPUG00000011407	DDX39B	100	93.287	Mustela_putorius_furo
ENSSLDG00000015763	ddx39b	72	95.820	ENSMLUG00000001681	DDX39B	100	95.820	Myotis_lucifugus
ENSSLDG00000015763	ddx39b	100	93.287	ENSNGAG00000022948	Ddx39b	100	93.056	Nannospalax_galili
ENSSLDG00000015763	ddx39b	66	95.439	ENSNLEG00000006094	DDX39B	81	95.439	Nomascus_leucogenys
ENSSLDG00000015763	ddx39b	86	96.847	ENSMEUG00000008264	DDX39B	86	96.847	Notamacropus_eugenii
ENSSLDG00000015763	ddx39b	100	93.519	ENSOPRG00000011923	DDX39B	100	93.287	Ochotona_princeps
ENSSLDG00000015763	ddx39b	100	93.056	ENSODEG00000018083	DDX39B	100	92.824	Octodon_degus
ENSSLDG00000015763	ddx39b	100	96.065	ENSONIG00000004740	ddx39b	100	96.065	Oreochromis_niloticus
ENSSLDG00000015763	ddx39b	56	90.041	ENSOANG00000008361	DDX39B	95	89.627	Ornithorhynchus_anatinus
ENSSLDG00000015763	ddx39b	100	90.157	ENSOCUG00000024126	DDX39B	100	89.933	Oryctolagus_cuniculus
ENSSLDG00000015763	ddx39b	83	88.235	ENSOGAG00000009067	-	100	95.062	Otolemur_garnettii
ENSSLDG00000015763	ddx39b	100	92.379	ENSOGAG00000028850	-	100	92.148	Otolemur_garnettii
ENSSLDG00000015763	ddx39b	100	93.287	ENSOARG00000008787	DDX39B	98	93.056	Ovis_aries
ENSSLDG00000015763	ddx39b	100	93.287	ENSPPAG00000043072	DDX39B	100	93.056	Pan_paniscus
ENSSLDG00000015763	ddx39b	100	93.519	ENSPPRG00000001913	DDX39B	100	93.287	Panthera_pardus
ENSSLDG00000015763	ddx39b	100	92.593	ENSPTIG00000017669	DDX39B	100	92.361	Panthera_tigris_altaica
ENSSLDG00000015763	ddx39b	100	93.287	ENSPTRG00000032509	DDX39B	100	93.056	Pan_troglodytes
ENSSLDG00000015763	ddx39b	100	93.287	ENSPANG00000018609	DDX39B	100	93.056	Papio_anubis
ENSSLDG00000015763	ddx39b	100	92.677	ENSPKIG00000011324	ddx39b	100	92.449	Paramormyrops_kingsleyae
ENSSLDG00000015763	ddx39b	100	92.824	ENSPEMG00000016905	Ddx39b	100	92.593	Peromyscus_maniculatus_bairdii
ENSSLDG00000015763	ddx39b	100	93.287	ENSPCIG00000017572	DDX39B	100	93.056	Phascolarctos_cinereus
ENSSLDG00000015763	ddx39b	100	93.287	ENSPPYG00000016433	DDX39B	100	93.056	Pongo_abelii
ENSSLDG00000015763	ddx39b	66	95.423	ENSPCAG00000003484	DDX39B	100	95.423	Procavia_capensis
ENSSLDG00000015763	ddx39b	100	93.287	ENSPCOG00000018656	DDX39B	100	93.056	Propithecus_coquereli
ENSSLDG00000015763	ddx39b	100	93.287	ENSPVAG00000004653	DDX39B	100	93.056	Pteropus_vampyrus
ENSSLDG00000015763	ddx39b	98	86.321	ENSPNYG00000010382	ddx39b	98	86.417	Pundamilia_nyererei
ENSSLDG00000015763	ddx39b	100	94.495	ENSPNAG00000026926	ddx39b	100	93.578	Pygocentrus_nattereri
ENSSLDG00000015763	ddx39b	100	93.056	ENSRNOG00000000841	Ddx39b	100	92.824	Rattus_norvegicus
ENSSLDG00000015763	ddx39b	100	83.102	ENSRBIG00000031309	DDX39B	100	82.870	Rhinopithecus_bieti
ENSSLDG00000015763	ddx39b	100	93.287	ENSRROG00000039517	DDX39B	100	93.056	Rhinopithecus_roxellana
ENSSLDG00000015763	ddx39b	100	83.102	ENSSBOG00000035513	-	100	82.870	Saimiri_boliviensis_boliviensis
ENSSLDG00000015763	ddx39b	100	93.287	ENSSHAG00000003209	DDX39B	100	93.056	Sarcophilus_harrisii
ENSSLDG00000015763	ddx39b	100	93.135	ENSSFOG00015016107	ddx39b	100	92.906	Scleropages_formosus
ENSSLDG00000015763	ddx39b	100	99.306	ENSSDUG00000011557	ddx39b	100	99.306	Seriola_dumerili
ENSSLDG00000015763	ddx39b	88	82.540	ENSSARG00000005245	DDX39B	100	82.275	Sorex_araneus
ENSSLDG00000015763	ddx39b	100	93.056	ENSSPUG00000012805	DDX39B	100	92.593	Sphenodon_punctatus
ENSSLDG00000015763	ddx39b	100	93.287	ENSSSCG00000001400	DDX39B	100	96.243	Sus_scrofa
ENSSLDG00000015763	ddx39b	100	70.602	ENSTBEG00000003721	DDX39B	100	70.370	Tupaia_belangeri
ENSSLDG00000015763	ddx39b	100	85.355	ENSTTRG00000014074	DDX39B	100	85.126	Tursiops_truncatus
ENSSLDG00000015763	ddx39b	100	81.106	ENSUAMG00000027335	DDX39B	100	80.876	Ursus_americanus
ENSSLDG00000015763	ddx39b	100	84.722	ENSUMAG00000015124	DDX39B	100	84.491	Ursus_maritimus
ENSSLDG00000015763	ddx39b	62	86.325	ENSVPAG00000009167	-	74	85.470	Vicugna_pacos
ENSSLDG00000015763	ddx39b	100	93.519	ENSVVUG00000019518	DDX39B	99	93.287	Vulpes_vulpes
ENSSLDG00000015763	ddx39b	100	81.379	ENSXETG00000002498	ddx39b	100	79.954	Xenopus_tropicalis