EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000015784 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: nucleolin-like
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 7194 bases
Position: chrPEQF01099021.1:427651-434844
Accession: 111661234
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000020169	RRM_1	PF00076.22	9.1e-41	1	4
ENSSLDP00000020169	RRM_1	PF00076.22	9.1e-41	2	4
ENSSLDP00000020169	RRM_1	PF00076.22	9.1e-41	3	4
ENSSLDP00000020169	RRM_1	PF00076.22	9.1e-41	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000020840	-	2974	XM_023414739	ENSSLDP00000020169	586 (aa)	XP_023270507	UPI000C6FB556

Gene Model

Click here to download ENSSLDG00000015784's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000015784's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000015784	-	57	31.609	ENSSLDG00000011661	pabpc1a	59	30.526
ENSSLDG00000015784	-	57	30.899	ENSSLDG00000006981	pabpc1l	63	30.899
ENSSLDG00000015784	-	57	30.366	ENSSLDG00000014156	pabpc1b	59	30.159
ENSSLDG00000015784	-	72	42.623	ENSSLDG00000002012	ncl	58	43.878

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000015784	-	95	57.401	ENSAPOG00000014534	-	92	57.576	Acanthochromis_polyacanthus
ENSSLDG00000015784	-	83	43.603	ENSAPOG00000023888	ncl	59	42.963	Acanthochromis_polyacanthus
ENSSLDG00000015784	-	65	43.684	ENSACIG00000013234	ncl	63	43.959	Amphilophus_citrinellus
ENSSLDG00000015784	-	95	56.931	ENSAOCG00000014792	-	92	58.277	Amphiprion_ocellaris
ENSSLDG00000015784	-	83	43.603	ENSAOCG00000003133	ncl	57	43.210	Amphiprion_ocellaris
ENSSLDG00000015784	-	95	56.743	ENSAPEG00000013612	-	92	58.081	Amphiprion_percula
ENSSLDG00000015784	-	83	43.603	ENSAPEG00000002769	ncl	57	43.210	Amphiprion_percula
ENSSLDG00000015784	-	69	43.627	ENSATEG00000013343	ncl	61	44.262	Anabas_testudineus
ENSSLDG00000015784	-	99	56.639	ENSATEG00000019862	-	91	64.159	Anabas_testudineus
ENSSLDG00000015784	-	65	39.241	ENSAPLG00000012897	-	64	40.602	Anas_platyrhynchos
ENSSLDG00000015784	-	68	40.299	ENSACAG00000001006	-	55	40.048	Anolis_carolinensis
ENSSLDG00000015784	-	60	43.059	ENSACLG00000026031	ncl	95	41.240	Astatotilapia_calliptera
ENSSLDG00000015784	-	70	41.148	ENSAMXG00000001647	ncl	84	43.210	Astyanax_mexicanus
ENSSLDG00000015784	-	61	33.520	ENSCHIG00000012665	-	52	33.512	Capra_hircus
ENSSLDG00000015784	-	65	41.058	ENSCPBG00000016444	-	62	39.773	Chrysemys_picta_bellii
ENSSLDG00000015784	-	65	43.979	ENSCSEG00000015089	ncl	62	43.230	Cynoglossus_semilaevis
ENSSLDG00000015784	-	64	42.216	ENSCVAG00000012600	ncl	56	41.960	Cyprinodon_variegatus
ENSSLDG00000015784	-	63	43.280	ENSDARG00000002710	ncl	85	43.478	Danio_rerio
ENSSLDG00000015784	-	61	35.278	ENSDNOG00000040257	-	61	35.013	Dasypus_novemcinctus
ENSSLDG00000015784	-	67	36.683	ENSEBUG00000016173	ncl	56	36.092	Eptatretus_burgeri
ENSSLDG00000015784	-	65	44.444	ENSELUG00000006033	ncl	61	44.444	Esox_lucius
ENSSLDG00000015784	-	68	49.876	ENSELUG00000022826	-	81	50.000	Esox_lucius
ENSSLDG00000015784	-	65	41.013	ENSFALG00000007592	-	57	41.176	Ficedula_albicollis
ENSSLDG00000015784	-	65	42.670	ENSFHEG00000018000	ncl	63	43.536	Fundulus_heteroclitus
ENSSLDG00000015784	-	66	40.806	ENSGMOG00000001341	ncl	61	40.447	Gadus_morhua
ENSSLDG00000015784	-	65	41.371	ENSGALG00000032930	NCL	59	40.235	Gallus_gallus
ENSSLDG00000015784	-	65	41.885	ENSGAFG00000015375	ncl	51	42.025	Gambusia_affinis
ENSSLDG00000015784	-	65	42.448	ENSGACG00000008970	ncl	65	41.262	Gasterosteus_aculeatus
ENSSLDG00000015784	-	65	40.253	ENSGAGG00000013330	-	59	39.336	Gopherus_agassizii
ENSSLDG00000015784	-	71	43.269	ENSHBUG00000006869	ncl	59	42.857	Haplochromis_burtoni
ENSSLDG00000015784	-	65	42.298	ENSHCOG00000010234	ncl	57	41.832	Hippocampus_comes
ENSSLDG00000015784	-	54	42.138	ENSIPUG00000024556	ncl	89	42.265	Ictalurus_punctatus
ENSSLDG00000015784	-	65	42.670	ENSKMAG00000008111	ncl	72	38.104	Kryptolebias_marmoratus
ENSSLDG00000015784	-	93	61.634	ENSLBEG00000007915	-	94	61.002	Labrus_bergylta
ENSSLDG00000015784	-	65	43.455	ENSLBEG00000019073	ncl	56	43.478	Labrus_bergylta
ENSSLDG00000015784	-	65	66.494	ENSLBEG00000014278	-	85	66.230	Labrus_bergylta
ENSSLDG00000015784	-	63	41.053	ENSLACG00000022167	-	81	40.704	Latimeria_chalumnae
ENSSLDG00000015784	-	66	43.669	ENSLACG00000009328	ncl	59	43.392	Latimeria_chalumnae
ENSSLDG00000015784	-	63	42.204	ENSLOCG00000004828	ncl	73	37.566	Lepisosteus_oculatus
ENSSLDG00000015784	-	94	59.058	ENSMAMG00000003479	-	73	72.886	Mastacembelus_armatus
ENSSLDG00000015784	-	90	42.790	ENSMZEG00005017438	ncl	64	42.824	Maylandia_zebra
ENSSLDG00000015784	-	62	40.741	ENSMGAG00000008147	-	89	39.401	Meleagris_gallopavo
ENSSLDG00000015784	-	54	42.947	ENSMMOG00000008553	ncl	84	43.293	Mola_mola
ENSSLDG00000015784	-	82	39.896	ENSMODG00000002470	-	61	39.953	Monodelphis_domestica
ENSSLDG00000015784	-	67	42.778	ENSMALG00000014827	ncl	60	39.437	Monopterus_albus
ENSSLDG00000015784	-	54	32.602	ENSMPUG00000001663	-	57	31.875	Mustela_putorius_furo
ENSSLDG00000015784	-	53	44.156	ENSNBRG00000001232	ncl	88	42.553	Neolamprologus_brichardi
ENSSLDG00000015784	-	53	44.156	ENSNBRG00000000146	-	92	42.553	Neolamprologus_brichardi
ENSSLDG00000015784	-	82	40.310	ENSMEUG00000012335	-	60	40.714	Notamacropus_eugenii
ENSSLDG00000015784	-	71	43.269	ENSONIG00000012508	ncl	63	42.857	Oreochromis_niloticus
ENSSLDG00000015784	-	66	53.553	ENSONIG00000010631	-	98	53.553	Oreochromis_niloticus
ENSSLDG00000015784	-	61	42.500	ENSOANG00000008732	-	66	42.368	Ornithorhynchus_anatinus
ENSSLDG00000015784	-	68	51.980	ENSORLG00000004645	-	85	53.827	Oryzias_latipes
ENSSLDG00000015784	-	63	43.396	ENSORLG00000007055	ncl	53	42.893	Oryzias_latipes
ENSSLDG00000015784	-	68	51.485	ENSORLG00020003497	-	76	53.316	Oryzias_latipes_hni
ENSSLDG00000015784	-	65	42.932	ENSORLG00020017943	ncl	53	42.893	Oryzias_latipes_hni
ENSSLDG00000015784	-	68	54.455	ENSORLG00015006613	-	79	54.847	Oryzias_latipes_hsok
ENSSLDG00000015784	-	66	42.268	ENSORLG00015013815	ncl	90	42.308	Oryzias_latipes_hsok
ENSSLDG00000015784	-	65	43.194	ENSOMEG00000020786	ncl	52	43.000	Oryzias_melastigma
ENSSLDG00000015784	-	68	52.605	ENSOMEG00000015864	-	84	53.077	Oryzias_melastigma
ENSSLDG00000015784	-	65	44.125	ENSPKIG00000002604	ncl	59	42.725	Paramormyrops_kingsleyae
ENSSLDG00000015784	-	61	40.921	ENSPSIG00000002361	-	51	41.039	Pelodiscus_sinensis
ENSSLDG00000015784	-	65	40.625	ENSPMGG00000004709	ncl	92	39.891	Periophthalmus_magnuspinnatus
ENSSLDG00000015784	-	82	40.260	ENSPCIG00000003293	-	59	40.625	Phascolarctos_cinereus
ENSSLDG00000015784	-	65	41.775	ENSPFOG00000024205	ncl	53	42.199	Poecilia_formosa
ENSSLDG00000015784	-	65	41.514	ENSPLAG00000024026	ncl	56	41.709	Poecilia_latipinna
ENSSLDG00000015784	-	65	41.775	ENSPMEG00000006000	ncl	55	42.199	Poecilia_mexicana
ENSSLDG00000015784	-	89	42.926	ENSPNYG00000020494	ncl	64	42.759	Pundamilia_nyererei
ENSSLDG00000015784	-	65	43.342	ENSPNAG00000006192	ncl	53	43.939	Pygocentrus_nattereri
ENSSLDG00000015784	-	82	36.598	ENSSHAG00000002702	-	65	37.349	Sarcophilus_harrisii
ENSSLDG00000015784	-	68	35.472	ENSSHAG00000007489	-	51	35.106	Sarcophilus_harrisii
ENSSLDG00000015784	-	53	35.783	ENSSFOG00015013153	-	76	35.783	Scleropages_formosus
ENSSLDG00000015784	-	71	43.230	ENSSFOG00015008583	ncl	62	44.550	Scleropages_formosus
ENSSLDG00000015784	-	83	44.125	ENSSMAG00000021241	ncl	59	43.860	Scophthalmus_maximus
ENSSLDG00000015784	-	93	62.963	ENSSMAG00000007582	-	93	63.025	Scophthalmus_maximus
ENSSLDG00000015784	-	100	94.932	ENSSDUG00000010922	-	100	94.932	Seriola_dumerili
ENSSLDG00000015784	-	66	44.386	ENSSDUG00000006128	ncl	91	43.596	Seriola_dumerili
ENSSLDG00000015784	-	89	38.389	ENSSPUG00000008244	-	80	39.329	Sphenodon_punctatus
ENSSLDG00000015784	-	95	57.143	ENSSPAG00000001859	-	92	57.831	Stegastes_partitus
ENSSLDG00000015784	-	65	41.344	ENSTGUG00000009782	-	64	41.063	Taeniopygia_guttata
ENSSLDG00000015784	-	63	42.588	ENSTRUG00000008185	ncl	60	42.211	Takifugu_rubripes
ENSSLDG00000015784	-	62	43.700	ENSTNIG00000012186	ncl	64	42.680	Tetraodon_nigroviridis
ENSSLDG00000015784	-	65	43.299	ENSXETG00000009517	ncl	56	43.596	Xenopus_tropicalis
ENSSLDG00000015784	-	70	53.333	ENSXCOG00000007369	-	93	54.726	Xiphophorus_couchianus
ENSSLDG00000015784	-	71	35.561	ENSXCOG00000003524	ncl	92	36.754	Xiphophorus_couchianus
ENSSLDG00000015784	-	65	42.670	ENSXMAG00000005914	ncl	59	42.553	Xiphophorus_maculatus