EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000015796 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 2150 bases
Position: chrPEQF01099088.1:964228-966377
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000020184	zf-C2H2	PF00096.26	3.2e-24	1	3
ENSSLDP00000020184	zf-C2H2	PF00096.26	3.2e-24	2	3
ENSSLDP00000020184	zf-C2H2	PF00096.26	3.2e-24	3	3
ENSSLDP00000020184	zf-met	PF12874.7	1.7e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000020855	-	1284	-	ENSSLDP00000020184	427 (aa)	-	-

Gene Model

Click here to download ENSSLDG00000015796's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000015796's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000015796	-	89	30.408	ENSSLDG00000020675	-	94	30.408
ENSSLDG00000015796	-	72	32.800	ENSSLDG00000006724	-	96	32.800
ENSSLDG00000015796	-	67	30.833	ENSSLDG00000023060	-	70	30.833
ENSSLDG00000015796	-	66	33.099	ENSSLDG00000006217	-	76	33.099
ENSSLDG00000015796	-	74	32.184	ENSSLDG00000010390	-	79	32.184
ENSSLDG00000015796	-	76	30.405	ENSSLDG00000004428	PRDM15	52	30.612
ENSSLDG00000015796	-	69	31.737	ENSSLDG00000009821	-	80	31.737
ENSSLDG00000015796	-	85	39.394	ENSSLDG00000007756	-	94	32.667
ENSSLDG00000015796	-	74	35.398	ENSSLDG00000012133	-	74	44.068
ENSSLDG00000015796	-	75	30.968	ENSSLDG00000013760	-	86	30.380
ENSSLDG00000015796	-	79	30.400	ENSSLDG00000002756	-	90	30.400
ENSSLDG00000015796	-	74	30.455	ENSSLDG00000018598	-	82	30.455
ENSSLDG00000015796	-	64	34.146	ENSSLDG00000018033	-	58	34.146
ENSSLDG00000015796	-	67	34.066	ENSSLDG00000025359	-	52	34.066
ENSSLDG00000015796	-	70	32.143	ENSSLDG00000000203	-	69	39.024
ENSSLDG00000015796	-	73	30.341	ENSSLDG00000016317	-	85	30.341
ENSSLDG00000015796	-	72	32.258	ENSSLDG00000004485	-	61	32.258
ENSSLDG00000015796	-	73	30.479	ENSSLDG00000013353	prdm5	72	30.479
ENSSLDG00000015796	-	70	30.811	ENSSLDG00000014436	-	70	30.811
ENSSLDG00000015796	-	52	31.915	ENSSLDG00000007568	-	85	31.915
ENSSLDG00000015796	-	70	38.043	ENSSLDG00000025265	znf526	56	38.043
ENSSLDG00000015796	-	72	40.789	ENSSLDG00000008645	-	83	40.789
ENSSLDG00000015796	-	71	31.548	ENSSLDG00000000376	-	73	31.548
ENSSLDG00000015796	-	94	30.303	ENSSLDG00000021127	-	56	30.303
ENSSLDG00000015796	-	68	31.933	ENSSLDG00000010190	-	78	31.933
ENSSLDG00000015796	-	72	32.740	ENSSLDG00000000859	-	94	32.740
ENSSLDG00000015796	-	69	40.299	ENSSLDG00000020655	-	56	40.299
ENSSLDG00000015796	-	79	32.911	ENSSLDG00000017937	-	95	32.911
ENSSLDG00000015796	-	76	33.333	ENSSLDG00000012036	-	91	33.333
ENSSLDG00000015796	-	75	32.735	ENSSLDG00000020727	-	93	32.735
ENSSLDG00000015796	-	67	37.500	ENSSLDG00000017166	scrt1b	51	37.500
ENSSLDG00000015796	-	66	33.099	ENSSLDG00000005868	-	77	33.099
ENSSLDG00000015796	-	69	36.000	ENSSLDG00000006288	-	76	36.000
ENSSLDG00000015796	-	72	34.118	ENSSLDG00000014177	zbtb47b	72	34.118
ENSSLDG00000015796	-	76	30.317	ENSSLDG00000006994	-	70	30.317
ENSSLDG00000015796	-	73	31.844	ENSSLDG00000012320	-	94	30.738
ENSSLDG00000015796	-	85	34.706	ENSSLDG00000005850	-	95	34.783
ENSSLDG00000015796	-	76	35.802	ENSSLDG00000004756	-	87	35.802
ENSSLDG00000015796	-	73	32.673	ENSSLDG00000000457	-	74	32.673
ENSSLDG00000015796	-	67	30.537	ENSSLDG00000013170	zbtb17	78	35.714
ENSSLDG00000015796	-	73	34.343	ENSSLDG00000012821	znf236	61	34.343
ENSSLDG00000015796	-	76	32.258	ENSSLDG00000020432	-	87	32.258
ENSSLDG00000015796	-	70	30.579	ENSSLDG00000015116	-	70	30.579
ENSSLDG00000015796	-	61	32.584	ENSSLDG00000004098	-	96	32.584
ENSSLDG00000015796	-	72	30.542	ENSSLDG00000007524	-	57	30.542
ENSSLDG00000015796	-	82	33.929	ENSSLDG00000023661	-	96	33.929

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000015796	-	70	32.800	ENSCSAVG00000009574	-	100	32.800	Ciona_savignyi
ENSSLDG00000015796	-	72	32.540	ENSCSEG00000005491	-	78	32.540	Cynoglossus_semilaevis
ENSSLDG00000015796	-	93	41.429	ENSCVAG00000016098	-	88	41.429	Cyprinodon_variegatus
ENSSLDG00000015796	-	75	34.503	ENSCVAG00000002295	-	56	34.503	Cyprinodon_variegatus
ENSSLDG00000015796	-	70	30.657	FBgn0037722	CG8319	61	30.657	Drosophila_melanogaster
ENSSLDG00000015796	-	68	33.684	FBgn0030012	CG18262	55	33.684	Drosophila_melanogaster
ENSSLDG00000015796	-	71	32.278	ENSEBUG00000008392	-	74	30.640	Eptatretus_burgeri
ENSSLDG00000015796	-	95	30.159	ENSEBUG00000015522	-	82	30.159	Eptatretus_burgeri
ENSSLDG00000015796	-	75	35.417	ENSFHEG00000020889	-	73	35.417	Fundulus_heteroclitus
ENSSLDG00000015796	-	69	32.520	ENSFHEG00000003596	-	54	32.520	Fundulus_heteroclitus
ENSSLDG00000015796	-	71	35.366	ENSGACG00000018415	-	95	35.366	Gasterosteus_aculeatus
ENSSLDG00000015796	-	73	53.943	ENSIPUG00000002510	-	61	53.943	Ictalurus_punctatus
ENSSLDG00000015796	-	67	30.405	ENSIPUG00000013526	-	72	30.405	Ictalurus_punctatus
ENSSLDG00000015796	-	72	33.628	ENSKMAG00000007658	-	81	33.628	Kryptolebias_marmoratus
ENSSLDG00000015796	-	71	31.250	ENSKMAG00000012909	-	83	31.250	Kryptolebias_marmoratus
ENSSLDG00000015796	-	52	37.681	ENSLBEG00000026573	-	60	37.681	Labrus_bergylta
ENSSLDG00000015796	-	72	87.987	ENSMAMG00000023631	-	64	87.987	Mastacembelus_armatus
ENSSLDG00000015796	-	73	31.119	ENSONIG00000016416	-	96	31.119	Oreochromis_niloticus
ENSSLDG00000015796	-	79	35.088	ENSONIG00000003224	-	93	35.088	Oreochromis_niloticus
ENSSLDG00000015796	-	63	32.990	ENSONIG00000003471	-	94	32.990	Oreochromis_niloticus
ENSSLDG00000015796	-	71	37.079	ENSOMEG00000017673	-	65	37.079	Oryzias_melastigma
ENSSLDG00000015796	-	73	69.868	ENSPMGG00000013602	-	59	69.868	Periophthalmus_magnuspinnatus
ENSSLDG00000015796	-	65	30.323	ENSPMGG00000019842	-	70	30.323	Periophthalmus_magnuspinnatus
ENSSLDG00000015796	-	73	31.250	ENSPMGG00000000458	-	96	32.886	Periophthalmus_magnuspinnatus
ENSSLDG00000015796	-	70	38.961	ENSPMGG00000022524	-	94	37.634	Periophthalmus_magnuspinnatus
ENSSLDG00000015796	-	72	33.333	ENSPMGG00000000218	-	58	33.673	Periophthalmus_magnuspinnatus
ENSSLDG00000015796	-	75	30.370	ENSPMGG00000000243	-	72	30.370	Periophthalmus_magnuspinnatus
ENSSLDG00000015796	-	71	30.844	ENSPLAG00000006174	-	70	31.731	Poecilia_latipinna
ENSSLDG00000015796	-	71	30.841	ENSPLAG00000011254	-	62	30.841	Poecilia_latipinna
ENSSLDG00000015796	-	72	88.350	ENSSMAG00000001359	-	89	88.350	Scophthalmus_maximus
ENSSLDG00000015796	-	89	30.435	ENSSDUG00000000946	-	97	30.435	Seriola_dumerili
ENSSLDG00000015796	-	98	63.415	ENSTRUG00000019941	-	53	81.126	Takifugu_rubripes
ENSSLDG00000015796	-	79	77.143	ENSTNIG00000008154	-	98	77.143	Tetraodon_nigroviridis