EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000015823 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: RAB13%2C member RAS oncogene family
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 5862 bases
Position: chrPEQF01098409.1:576145-582006
Accession: 111652202
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000020226	MMR_HSR1	PF01926.23	6.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000020900	-	3040	XM_023402404	ENSSLDP00000020226	200 (aa)	XP_023258172	UPI000BBED05A

Gene Model

Click here to download ENSSLDG00000015823's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000015823's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000015823	-	75	30.065	ENSSLDG00000009955	-	80	30.065
ENSSLDG00000015823	-	77	36.364	ENSSLDG00000018681	rheb	83	36.364
ENSSLDG00000015823	-	74	45.098	ENSSLDG00000008070	-	63	45.098
ENSSLDG00000015823	-	84	42.012	ENSSLDG00000020354	rab42a	78	42.012
ENSSLDG00000015823	-	85	45.349	ENSSLDG00000009068	-	81	45.349
ENSSLDG00000015823	-	98	54.000	ENSSLDG00000018942	rab1ab	98	54.000
ENSSLDG00000015823	-	86	50.581	ENSSLDG00000022239	rab12	71	50.581
ENSSLDG00000015823	-	80	45.122	ENSSLDG00000022004	rab33a	59	45.122
ENSSLDG00000015823	-	61	31.200	ENSSLDG00000020097	-	66	31.200
ENSSLDG00000015823	-	84	41.520	ENSSLDG00000002646	si:dkey-34d22.5	77	41.520
ENSSLDG00000015823	-	90	44.865	ENSSLDG00000006977	rab18a	88	44.865
ENSSLDG00000015823	-	91	55.801	ENSSLDG00000011757	-	88	57.386
ENSSLDG00000015823	-	87	37.640	ENSSLDG00000011597	si:dkey-13a21.4	87	37.640
ENSSLDG00000015823	-	56	35.714	ENSSLDG00000014472	-	86	36.290
ENSSLDG00000015823	-	79	44.937	ENSSLDG00000015289	-	76	44.937
ENSSLDG00000015823	-	87	47.399	ENSSLDG00000020676	rab11bb	79	47.399
ENSSLDG00000015823	-	80	49.057	ENSSLDG00000012116	rab11al	74	49.057
ENSSLDG00000015823	-	87	44.828	ENSSLDG00000012091	rab25b	84	44.828
ENSSLDG00000015823	-	86	43.023	ENSSLDG00000010880	rab25a	82	43.023
ENSSLDG00000015823	-	95	40.104	ENSSLDG00000011069	rab5aa	89	40.104
ENSSLDG00000015823	-	97	54.124	ENSSLDG00000018024	zgc:171927	88	54.124
ENSSLDG00000015823	-	88	35.593	ENSSLDG00000000287	rab23	90	35.450
ENSSLDG00000015823	-	77	36.364	ENSSLDG00000025169	rhebl1	83	36.364
ENSSLDG00000015823	-	85	45.930	ENSSLDG00000006360	RAB39B	81	45.930
ENSSLDG00000015823	-	58	30.769	ENSSLDG00000017576	arl3	64	30.769
ENSSLDG00000015823	-	80	42.683	ENSSLDG00000019214	zgc:101559	70	42.683
ENSSLDG00000015823	-	87	41.143	ENSSLDG00000017771	rab5c	80	41.143
ENSSLDG00000015823	-	84	30.114	ENSSLDG00000015143	dnajc27	64	30.114
ENSSLDG00000015823	-	76	39.623	ENSSLDG00000014812	rab34b	78	39.623
ENSSLDG00000015823	-	86	55.556	ENSSLDG00000021984	RAB15	81	55.556
ENSSLDG00000015823	-	85	42.373	ENSSLDG00000009725	-	86	42.373
ENSSLDG00000015823	-	88	55.429	ENSSLDG00000023317	rab15	82	55.429
ENSSLDG00000015823	-	90	32.973	ENSSLDG00000015122	rras2	94	33.503
ENSSLDG00000015823	-	84	44.311	ENSSLDG00000010503	rab14	78	44.311
ENSSLDG00000015823	-	81	32.370	ENSSLDG00000003489	rasl11a	67	32.370
ENSSLDG00000015823	-	86	48.538	ENSSLDG00000022533	rab30	84	48.538
ENSSLDG00000015823	-	82	38.690	ENSSLDG00000000773	rab9a	83	38.690
ENSSLDG00000015823	-	88	37.989	ENSSLDG00000024959	-	86	37.989
ENSSLDG00000015823	-	78	32.500	ENSSLDG00000017618	rasd4	75	32.500
ENSSLDG00000015823	-	88	37.989	ENSSLDG00000012391	RAB7A	86	37.989
ENSSLDG00000015823	-	82	40.237	ENSSLDG00000009351	rab9b	83	40.237
ENSSLDG00000015823	-	96	36.041	ENSSLDG00000022168	kras	98	35.751
ENSSLDG00000015823	-	87	32.584	ENSSLDG00000013333	si:cabz01085950.1	87	32.584
ENSSLDG00000015823	-	79	42.405	ENSSLDG00000022282	rab41	75	42.405
ENSSLDG00000015823	-	91	55.249	ENSSLDG00000012251	rab1ba	89	55.249
ENSSLDG00000015823	-	87	47.399	ENSSLDG00000005275	-	79	47.399
ENSSLDG00000015823	-	79	40.000	ENSSLDG00000009573	rab34a	67	40.000
ENSSLDG00000015823	-	82	41.667	ENSSLDG00000004352	-	78	41.667
ENSSLDG00000015823	-	95	35.979	ENSSLDG00000020438	rab22a	97	35.979
ENSSLDG00000015823	-	90	37.838	ENSSLDG00000008584	rab33ba	85	37.838
ENSSLDG00000015823	-	85	50.000	ENSSLDG00000003631	si:dkey-16l2.16	87	47.802
ENSSLDG00000015823	-	79	44.937	ENSSLDG00000012474	rab6bb	76	44.937
ENSSLDG00000015823	-	67	30.882	ENSSLDG00000000124	arl2	70	30.882
ENSSLDG00000015823	-	93	45.161	ENSSLDG00000009438	rab11a	87	45.161
ENSSLDG00000015823	-	81	34.969	ENSSLDG00000020918	RAB17	71	34.969
ENSSLDG00000015823	-	92	43.523	ENSSLDG00000005221	rab11ba	89	43.523
ENSSLDG00000015823	-	96	34.896	ENSSLDG00000012627	hrasb	98	34.896
ENSSLDG00000015823	-	97	38.942	ENSSLDG00000005718	-	97	38.942
ENSSLDG00000015823	-	84	47.619	ENSSLDG00000022555	rab2a	79	47.619
ENSSLDG00000015823	-	92	38.021	ENSSLDG00000009464	rab36	71	38.021
ENSSLDG00000015823	-	84	42.197	ENSSLDG00000003264	rab6ba	83	42.197
ENSSLDG00000015823	-	82	46.951	ENSSLDG00000006014	rab18b	80	46.951
ENSSLDG00000015823	-	84	36.471	ENSSLDG00000021833	si:ch73-116o1.2	81	36.471

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000015823	-	100	99.000	ENSAPOG00000001040	-	100	99.000	Acanthochromis_polyacanthus
ENSSLDG00000015823	-	100	66.667	ENSACIG00000003157	-	100	66.667	Amphilophus_citrinellus
ENSSLDG00000015823	-	100	99.000	ENSAOCG00000015908	-	100	99.000	Amphiprion_ocellaris
ENSSLDG00000015823	-	100	99.000	ENSAPEG00000004121	-	100	99.000	Amphiprion_percula
ENSSLDG00000015823	-	100	94.000	ENSATEG00000023662	-	100	94.000	Anabas_testudineus
ENSSLDG00000015823	-	100	96.500	ENSACLG00000019643	-	100	96.500	Astatotilapia_calliptera
ENSSLDG00000015823	-	100	94.000	ENSCVAG00000022649	-	100	94.000	Cyprinodon_variegatus
ENSSLDG00000015823	-	86	73.837	ENSDARG00000103934	megf8	99	73.837	Danio_rerio
ENSSLDG00000015823	-	100	92.500	ENSGAFG00000014787	-	100	92.500	Gambusia_affinis
ENSSLDG00000015823	-	100	96.500	ENSHBUG00000003728	-	100	96.500	Haplochromis_burtoni
ENSSLDG00000015823	-	100	96.500	ENSMZEG00005015817	-	100	96.500	Maylandia_zebra
ENSSLDG00000015823	-	100	96.000	ENSMMOG00000003924	-	100	96.000	Mola_mola
ENSSLDG00000015823	-	100	96.000	ENSMALG00000020807	-	100	96.000	Monopterus_albus
ENSSLDG00000015823	-	54	90.741	ENSOPRG00000014416	-	100	90.741	Ochotona_princeps
ENSSLDG00000015823	-	100	92.500	ENSORLG00000025395	-	100	92.500	Oryzias_latipes
ENSSLDG00000015823	-	100	92.500	ENSORLG00020009535	-	100	92.500	Oryzias_latipes_hni
ENSSLDG00000015823	-	100	93.000	ENSORLG00015015518	-	100	93.000	Oryzias_latipes_hsok
ENSSLDG00000015823	-	100	89.552	ENSPKIG00000014528	-	100	89.552	Paramormyrops_kingsleyae
ENSSLDG00000015823	-	100	94.000	ENSPFOG00000014418	-	100	94.000	Poecilia_formosa
ENSSLDG00000015823	-	100	94.000	ENSPLAG00000003181	-	100	94.000	Poecilia_latipinna
ENSSLDG00000015823	-	100	94.000	ENSPMEG00000022988	-	100	94.000	Poecilia_mexicana
ENSSLDG00000015823	-	100	94.000	ENSPMEG00000008020	-	100	94.000	Poecilia_mexicana
ENSSLDG00000015823	-	100	95.500	ENSPNYG00000004681	-	100	95.500	Pundamilia_nyererei
ENSSLDG00000015823	-	100	92.500	ENSSFOG00015021754	rab13	100	92.500	Scleropages_formosus
ENSSLDG00000015823	-	100	97.500	ENSSMAG00000016376	-	100	97.500	Scophthalmus_maximus
ENSSLDG00000015823	-	100	67.150	ENSSMAG00000002569	-	100	67.150	Scophthalmus_maximus
ENSSLDG00000015823	-	100	100.000	ENSSDUG00000006307	-	100	100.000	Seriola_dumerili
ENSSLDG00000015823	-	100	99.000	ENSSPAG00000022440	-	100	99.000	Stegastes_partitus
ENSSLDG00000015823	-	100	95.500	ENSTNIG00000018319	-	100	95.500	Tetraodon_nigroviridis
ENSSLDG00000015823	-	100	93.000	ENSXMAG00000016094	-	100	93.000	Xiphophorus_maculatus