EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSLDG00000015957 (Gene tree)
Gene ID: -
Gene Symbol: trpt1
Alias: zgc:113138
Full Name: tRNA phosphotransferase 1
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 7787 bases
Position: chrPEQF01098812.1:506018-513804
Accession: 111655830
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000020409	PTS_2-RNA	PF01885.16	3.1e-62	1	1
ENSSLDP00000020420	PTS_2-RNA	PF01885.16	1.9e-58	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000021092	-	696	XM_023407360	ENSSLDP00000020409	231 (aa)	XP_023263128	-
ENSSLDT00000021104	-	774	-	ENSSLDP00000020420	257 (aa)	-	-

Gene Model

Click here to download ENSSLDG00000015957's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000015957's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000015957	trpt1	88	58.621	ENSG00000149743	TRPT1	98	50.289	Homo_sapiens
ENSSLDG00000015957	trpt1	83	87.435	ENSAPOG00000012925	trpt1	87	87.000	Acanthochromis_polyacanthus
ENSSLDG00000015957	trpt1	81	60.317	ENSAMEG00000018040	TRPT1	79	58.621	Ailuropoda_melanoleuca
ENSSLDG00000015957	trpt1	82	85.789	ENSACIG00000022413	trpt1	90	84.653	Amphilophus_citrinellus
ENSSLDG00000015957	trpt1	82	88.947	ENSAOCG00000001163	trpt1	76	87.500	Amphiprion_ocellaris
ENSSLDG00000015957	trpt1	82	88.421	ENSAPEG00000009873	trpt1	90	85.854	Amphiprion_percula
ENSSLDG00000015957	trpt1	90	81.818	ENSATEG00000014371	trpt1	88	87.500	Anabas_testudineus
ENSSLDG00000015957	trpt1	81	61.170	ENSACAG00000000696	TRPT1	89	59.406	Anolis_carolinensis
ENSSLDG00000015957	trpt1	90	58.796	ENSANAG00000019580	TRPT1	87	52.764	Aotus_nancymaae
ENSSLDG00000015957	trpt1	82	87.895	ENSACLG00000016893	trpt1	87	87.437	Astatotilapia_calliptera
ENSSLDG00000015957	trpt1	82	74.737	ENSAMXG00000010533	trpt1	88	72.500	Astyanax_mexicanus
ENSSLDG00000015957	trpt1	90	55.760	ENSBTAG00000016555	TRPT1	86	57.865	Bos_taurus
ENSSLDG00000015957	trpt1	88	57.561	ENSCJAG00000018169	TRPT1	80	60.000	Callithrix_jacchus
ENSSLDG00000015957	trpt1	81	59.259	ENSCAFG00000014591	TRPT1	81	57.635	Canis_familiaris
ENSSLDG00000015957	trpt1	81	59.259	ENSCAFG00020014101	TRPT1	82	58.128	Canis_lupus_dingo
ENSSLDG00000015957	trpt1	88	57.073	ENSCHIG00000021308	TRPT1	81	58.128	Capra_hircus
ENSSLDG00000015957	trpt1	70	55.488	ENSTSYG00000026766	TRPT1	98	46.821	Carlito_syrichta
ENSSLDG00000015957	trpt1	81	59.574	ENSCAPG00000016934	TRPT1	84	57.921	Cavia_aperea
ENSSLDG00000015957	trpt1	88	56.650	ENSCPOG00000002923	TRPT1	80	57.921	Cavia_porcellus
ENSSLDG00000015957	trpt1	70	60.736	ENSCCAG00000025683	TRPT1	98	51.176	Cebus_capucinus
ENSSLDG00000015957	trpt1	90	56.221	ENSCATG00000031563	TRPT1	87	50.505	Cercocebus_atys
ENSSLDG00000015957	trpt1	88	55.665	ENSCLAG00000016380	TRPT1	80	55.941	Chinchilla_lanigera
ENSSLDG00000015957	trpt1	90	56.944	ENSCSAG00000006952	TRPT1	80	58.128	Chlorocebus_sabaeus
ENSSLDG00000015957	trpt1	62	43.448	ENSCING00000002405	-	93	37.500	Ciona_intestinalis
ENSSLDG00000015957	trpt1	80	39.583	ENSCING00000024241	-	79	38.000	Ciona_intestinalis
ENSSLDG00000015957	trpt1	86	41.584	ENSCSAVG00000011071	-	59	42.932	Ciona_savignyi
ENSSLDG00000015957	trpt1	89	41.667	ENSCSAVG00000003949	-	88	41.624	Ciona_savignyi
ENSSLDG00000015957	trpt1	88	56.863	ENSCANG00000042980	TRPT1	80	58.333	Colobus_angolensis_palliatus
ENSSLDG00000015957	trpt1	88	57.488	ENSCGRG00001008474	Trpt1	81	58.128	Cricetulus_griseus_chok1gshd
ENSSLDG00000015957	trpt1	88	57.488	ENSCGRG00000009793	Trpt1	81	58.128	Cricetulus_griseus_crigri
ENSSLDG00000015957	trpt1	84	82.143	ENSCSEG00000005840	trpt1	87	82.673	Cynoglossus_semilaevis
ENSSLDG00000015957	trpt1	88	77.451	ENSCVAG00000006318	trpt1	95	79.412	Cyprinodon_variegatus
ENSSLDG00000015957	trpt1	86	70.149	ENSDARG00000037628	trpt1	89	70.149	Danio_rerio
ENSSLDG00000015957	trpt1	89	50.244	ENSDNOG00000044923	TRPT1	69	50.769	Dasypus_novemcinctus
ENSSLDG00000015957	trpt1	89	55.122	ENSDORG00000001624	Trpt1	87	53.738	Dipodomys_ordii
ENSSLDG00000015957	trpt1	82	40.625	FBgn0053057	CG33057	89	40.625	Drosophila_melanogaster
ENSSLDG00000015957	trpt1	89	52.885	ENSEBUG00000012569	-	90	51.176	Eptatretus_burgeri
ENSSLDG00000015957	trpt1	90	56.019	ENSEASG00005019983	TRPT1	79	59.113	Equus_asinus_asinus
ENSSLDG00000015957	trpt1	89	56.522	ENSECAG00000009917	TRPT1	98	49.171	Equus_caballus
ENSSLDG00000015957	trpt1	88	58.537	ENSEEUG00000012739	TRPT1	80	58.621	Erinaceus_europaeus
ENSSLDG00000015957	trpt1	83	76.963	ENSELUG00000007385	trpt1	87	77.500	Esox_lucius
ENSSLDG00000015957	trpt1	88	56.373	ENSFCAG00000024621	TRPT1	86	56.742	Felis_catus
ENSSLDG00000015957	trpt1	88	56.373	ENSFDAG00000002738	TRPT1	80	56.650	Fukomys_damarensis
ENSSLDG00000015957	trpt1	82	83.684	ENSFHEG00000002434	trpt1	90	82.353	Fundulus_heteroclitus
ENSSLDG00000015957	trpt1	82	75.789	ENSGMOG00000008716	trpt1	100	72.330	Gadus_morhua
ENSSLDG00000015957	trpt1	87	51.500	ENSGALG00000050256	TRPT1	66	52.525	Gallus_gallus
ENSSLDG00000015957	trpt1	83	82.199	ENSGAFG00000016762	trpt1	89	81.407	Gambusia_affinis
ENSSLDG00000015957	trpt1	82	84.737	ENSGACG00000016927	trpt1	95	82.659	Gasterosteus_aculeatus
ENSSLDG00000015957	trpt1	88	59.113	ENSGGOG00000012163	TRPT1	87	52.525	Gorilla_gorilla
ENSSLDG00000015957	trpt1	82	88.421	ENSHBUG00000012772	trpt1	87	87.000	Haplochromis_burtoni
ENSSLDG00000015957	trpt1	88	56.373	ENSHGLG00000013748	TRPT1	80	56.650	Heterocephalus_glaber_female
ENSSLDG00000015957	trpt1	88	56.373	ENSHGLG00100013048	TRPT1	80	56.650	Heterocephalus_glaber_male
ENSSLDG00000015957	trpt1	82	82.632	ENSHCOG00000000218	trpt1	87	81.000	Hippocampus_comes
ENSSLDG00000015957	trpt1	87	66.337	ENSIPUG00000002573	trpt1	88	67.164	Ictalurus_punctatus
ENSSLDG00000015957	trpt1	86	57.711	ENSSTOG00000014285	TRPT1	80	58.128	Ictidomys_tridecemlineatus
ENSSLDG00000015957	trpt1	87	58.209	ENSJJAG00000010855	Trpt1	81	59.113	Jaculus_jaculus
ENSSLDG00000015957	trpt1	83	83.246	ENSKMAG00000004214	trpt1	87	82.000	Kryptolebias_marmoratus
ENSSLDG00000015957	trpt1	83	88.482	ENSLBEG00000005640	trpt1	90	87.805	Labrus_bergylta
ENSSLDG00000015957	trpt1	82	63.158	ENSLACG00000016922	TRPT1	82	61.500	Latimeria_chalumnae
ENSSLDG00000015957	trpt1	82	67.895	ENSLOCG00000001345	trpt1	80	67.005	Lepisosteus_oculatus
ENSSLDG00000015957	trpt1	88	56.373	ENSLAFG00000009075	TRPT1	79	58.128	Loxodonta_africana
ENSSLDG00000015957	trpt1	90	56.221	ENSMFAG00000036828	TRPT1	87	50.505	Macaca_fascicularis
ENSSLDG00000015957	trpt1	90	56.744	ENSMMUG00000012940	TRPT1	87	50.505	Macaca_mulatta
ENSSLDG00000015957	trpt1	90	56.221	ENSMNEG00000033348	TRPT1	87	50.505	Macaca_nemestrina
ENSSLDG00000015957	trpt1	90	55.760	ENSMLEG00000031438	TRPT1	87	51.010	Mandrillus_leucophaeus
ENSSLDG00000015957	trpt1	82	90.000	ENSMAMG00000021617	trpt1	87	88.500	Mastacembelus_armatus
ENSSLDG00000015957	trpt1	82	88.421	ENSMZEG00005004773	trpt1	87	87.000	Maylandia_zebra
ENSSLDG00000015957	trpt1	67	58.599	ENSMAUG00000014107	Trpt1	80	57.738	Mesocricetus_auratus
ENSSLDG00000015957	trpt1	88	57.843	ENSMICG00000016950	TRPT1	88	52.000	Microcebus_murinus
ENSSLDG00000015957	trpt1	88	57.971	ENSMOCG00000021342	Trpt1	81	58.621	Microtus_ochrogaster
ENSSLDG00000015957	trpt1	82	85.789	ENSMMOG00000002896	trpt1	89	83.654	Mola_mola
ENSSLDG00000015957	trpt1	87	58.824	ENSMODG00000010226	TRPT1	89	58.376	Monodelphis_domestica
ENSSLDG00000015957	trpt1	82	89.474	ENSMALG00000012208	trpt1	81	88.500	Monopterus_albus
ENSSLDG00000015957	trpt1	88	56.796	MGP_CAROLIEiJ_G0022627	Trpt1	81	57.921	Mus_caroli
ENSSLDG00000015957	trpt1	88	56.796	ENSMUSG00000047656	Trpt1	81	57.921	Mus_musculus
ENSSLDG00000015957	trpt1	90	56.398	MGP_PahariEiJ_G0014121	Trpt1	81	58.621	Mus_pahari
ENSSLDG00000015957	trpt1	88	57.282	MGP_SPRETEiJ_G0023537	Trpt1	81	58.416	Mus_spretus
ENSSLDG00000015957	trpt1	88	57.353	ENSMPUG00000013272	TRPT1	73	58.128	Mustela_putorius_furo
ENSSLDG00000015957	trpt1	81	60.317	ENSMLUG00000024858	TRPT1	80	59.113	Myotis_lucifugus
ENSSLDG00000015957	trpt1	72	58.683	ENSNGAG00000007665	Trpt1	86	57.865	Nannospalax_galili
ENSSLDG00000015957	trpt1	82	82.439	ENSNBRG00000001528	trpt1	88	80.930	Neolamprologus_brichardi
ENSSLDG00000015957	trpt1	90	45.205	ENSNLEG00000033525	-	86	47.191	Nomascus_leucogenys
ENSSLDG00000015957	trpt1	81	60.638	ENSMEUG00000000943	TRPT1	78	58.883	Notamacropus_eugenii
ENSSLDG00000015957	trpt1	88	59.804	ENSOPRG00000015917	TRPT1	81	60.099	Ochotona_princeps
ENSSLDG00000015957	trpt1	88	55.610	ENSODEG00000015724	TRPT1	81	56.863	Octodon_degus
ENSSLDG00000015957	trpt1	82	85.789	ENSONIG00000005333	trpt1	87	84.500	Oreochromis_niloticus
ENSSLDG00000015957	trpt1	81	52.632	ENSOANG00000010375	TRPT1	89	50.000	Ornithorhynchus_anatinus
ENSSLDG00000015957	trpt1	87	57.426	ENSOCUG00000022244	TRPT1	80	58.621	Oryctolagus_cuniculus
ENSSLDG00000015957	trpt1	89	79.327	ENSORLG00000025159	trpt1	90	81.000	Oryzias_latipes
ENSSLDG00000015957	trpt1	91	77.143	ENSORLG00020018944	trpt1	89	80.500	Oryzias_latipes_hni
ENSSLDG00000015957	trpt1	73	81.548	ENSORLG00015017108	trpt1	77	81.503	Oryzias_latipes_hsok
ENSSLDG00000015957	trpt1	91	77.619	ENSOMEG00000018645	trpt1	89	81.000	Oryzias_melastigma
ENSSLDG00000015957	trpt1	88	56.863	ENSOGAG00000007134	TRPT1	80	57.353	Otolemur_garnettii
ENSSLDG00000015957	trpt1	88	57.561	ENSOARG00000004961	TRPT1	79	58.621	Ovis_aries
ENSSLDG00000015957	trpt1	89	51.923	ENSPPAG00000027600	TRPT1	86	58.757	Pan_paniscus
ENSSLDG00000015957	trpt1	76	55.682	ENSPPRG00000022870	TRPT1	86	57.303	Panthera_pardus
ENSSLDG00000015957	trpt1	70	57.669	ENSPTIG00000018872	TRPT1	96	49.123	Panthera_tigris_altaica
ENSSLDG00000015957	trpt1	89	51.923	ENSPTRG00000003822	TRPT1	86	58.757	Pan_troglodytes
ENSSLDG00000015957	trpt1	90	55.760	ENSPANG00000011001	TRPT1	87	50.000	Papio_anubis
ENSSLDG00000015957	trpt1	82	69.474	ENSPKIG00000008323	trpt1	87	68.657	Paramormyrops_kingsleyae
ENSSLDG00000015957	trpt1	90	54.955	ENSPSIG00000009910	TRPT1	85	55.941	Pelodiscus_sinensis
ENSSLDG00000015957	trpt1	93	71.560	ENSPMGG00000005037	trpt1	89	77.000	Periophthalmus_magnuspinnatus
ENSSLDG00000015957	trpt1	89	56.311	ENSPEMG00000013720	Trpt1	81	58.128	Peromyscus_maniculatus_bairdii
ENSSLDG00000015957	trpt1	82	55.263	ENSPMAG00000001449	trpt1	96	53.000	Petromyzon_marinus
ENSSLDG00000015957	trpt1	87	57.619	ENSPCIG00000008060	TRPT1	81	58.416	Phascolarctos_cinereus
ENSSLDG00000015957	trpt1	83	83.770	ENSPFOG00000009475	trpt1	88	83.000	Poecilia_formosa
ENSSLDG00000015957	trpt1	83	83.770	ENSPMEG00000003682	trpt1	88	83.000	Poecilia_mexicana
ENSSLDG00000015957	trpt1	83	83.246	ENSPREG00000015408	trpt1	88	82.500	Poecilia_reticulata
ENSSLDG00000015957	trpt1	81	60.638	ENSPPYG00000003116	TRPT1	79	59.406	Pongo_abelii
ENSSLDG00000015957	trpt1	89	55.122	ENSPCAG00000000762	TRPT1	80	57.426	Procavia_capensis
ENSSLDG00000015957	trpt1	88	56.863	ENSPCOG00000010370	TRPT1	88	51.500	Propithecus_coquereli
ENSSLDG00000015957	trpt1	82	81.463	ENSPNYG00000014805	trpt1	88	80.465	Pundamilia_nyererei
ENSSLDG00000015957	trpt1	82	72.487	ENSPNAG00000008548	trpt1	88	70.000	Pygocentrus_nattereri
ENSSLDG00000015957	trpt1	88	56.039	ENSRNOG00000023023	Trpt1	81	57.143	Rattus_norvegicus
ENSSLDG00000015957	trpt1	88	56.650	ENSRBIG00000040432	TRPT1	87	50.000	Rhinopithecus_bieti
ENSSLDG00000015957	trpt1	88	57.635	ENSRROG00000044905	TRPT1	87	51.010	Rhinopithecus_roxellana
ENSSLDG00000015957	trpt1	77	35.870	YOL102C	TPT1	79	35.870	Saccharomyces_cerevisiae
ENSSLDG00000015957	trpt1	90	57.870	ENSSBOG00000021466	TRPT1	86	52.284	Saimiri_boliviensis_boliviensis
ENSSLDG00000015957	trpt1	82	68.421	ENSSFOG00015005844	trpt1	89	66.667	Scleropages_formosus
ENSSLDG00000015957	trpt1	82	87.368	ENSSMAG00000017744	trpt1	88	86.500	Scophthalmus_maximus
ENSSLDG00000015957	trpt1	91	98.113	ENSSDUG00000017106	trpt1	97	98.174	Seriola_dumerili
ENSSLDG00000015957	trpt1	72	87.425	ENSSPAG00000007557	trpt1	82	79.703	Stegastes_partitus
ENSSLDG00000015957	trpt1	87	59.406	ENSSSCG00000013040	TRPT1	77	60.099	Sus_scrofa
ENSSLDG00000015957	trpt1	82	81.053	ENSTRUG00000023723	trpt1	87	80.000	Takifugu_rubripes
ENSSLDG00000015957	trpt1	82	84.737	ENSTNIG00000003381	trpt1	87	83.500	Tetraodon_nigroviridis
ENSSLDG00000015957	trpt1	81	55.851	ENSTBEG00000006023	TRPT1	79	55.500	Tupaia_belangeri
ENSSLDG00000015957	trpt1	90	55.093	ENSTTRG00000010252	TRPT1	79	57.143	Tursiops_truncatus
ENSSLDG00000015957	trpt1	88	57.843	ENSUAMG00000015208	TRPT1	79	58.621	Ursus_americanus
ENSSLDG00000015957	trpt1	88	57.843	ENSUMAG00000001410	TRPT1	79	58.621	Ursus_maritimus
ENSSLDG00000015957	trpt1	88	56.863	ENSVVUG00000029774	TRPT1	83	58.128	Vulpes_vulpes
ENSSLDG00000015957	trpt1	91	57.346	ENSXETG00000007196	trpt1	86	60.500	Xenopus_tropicalis
ENSSLDG00000015957	trpt1	83	83.770	ENSXCOG00000001614	trpt1	91	80.788	Xiphophorus_couchianus
ENSSLDG00000015957	trpt1	83	85.340	ENSXMAG00000003142	trpt1	90	84.500	Xiphophorus_maculatus