EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000015996 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: RNA-binding protein 5-like
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 11802 bases
Position: chrPEQF01098410.1:124124-135925
Accession: 111652223
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000020433	zf-RanBP	PF00641.18	5.2e-09	1	1
ENSSLDP00000020433	RRM_1	PF00076.22	9.9e-13	1	1
ENSSLDP00000020433	G-patch	PF01585.23	3.2e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000021117	-	4931	XM_023402432	ENSSLDP00000020433	843 (aa)	XP_023258200	UPI000C6FADE2

Gene Model

Click here to download ENSSLDG00000015996's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000015996's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000015996	-	100	66.820	ENSSLDG00000002329	rbm5	100	65.327
ENSSLDG00000015996	-	85	42.912	ENSSLDG00000001390	rbm10	77	42.529

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000015996	-	100	58.237	ENSG00000003756	RBM5	100	60.490	Homo_sapiens
ENSSLDG00000015996	-	100	66.628	ENSAPOG00000016625	rbm5	100	67.204	Acanthochromis_polyacanthus
ENSSLDG00000015996	-	100	86.746	ENSAPOG00000006011	-	100	84.652	Acanthochromis_polyacanthus
ENSSLDG00000015996	-	100	58.353	ENSAMEG00000012005	RBM5	100	60.723	Ailuropoda_melanoleuca
ENSSLDG00000015996	-	99	73.113	ENSACIG00000021310	-	99	73.231	Amphilophus_citrinellus
ENSSLDG00000015996	-	67	70.027	ENSACIG00000007571	rbm5	99	70.419	Amphilophus_citrinellus
ENSSLDG00000015996	-	99	77.962	ENSAOCG00000017312	-	99	76.394	Amphiprion_ocellaris
ENSSLDG00000015996	-	100	67.391	ENSAOCG00000002880	rbm5	100	66.590	Amphiprion_ocellaris
ENSSLDG00000015996	-	100	85.799	ENSAPEG00000018222	RBM5	100	83.707	Amphiprion_percula
ENSSLDG00000015996	-	91	66.076	ENSAPEG00000011862	rbm5	92	65.820	Amphiprion_percula
ENSSLDG00000015996	-	100	88.731	ENSATEG00000003838	-	100	88.731	Anabas_testudineus
ENSSLDG00000015996	-	100	66.590	ENSATEG00000024663	rbm5	100	66.358	Anabas_testudineus
ENSSLDG00000015996	-	93	59.900	ENSAPLG00000011176	RBM5	99	61.202	Anas_platyrhynchos
ENSSLDG00000015996	-	100	56.981	ENSACAG00000008580	RBM5	100	58.391	Anolis_carolinensis
ENSSLDG00000015996	-	100	58.469	ENSANAG00000025199	RBM5	100	60.723	Aotus_nancymaae
ENSSLDG00000015996	-	89	95.122	ENSACLG00000024198	RBM5	98	95.122	Astatotilapia_calliptera
ENSSLDG00000015996	-	100	66.170	ENSACLG00000012748	rbm5	100	66.819	Astatotilapia_calliptera
ENSSLDG00000015996	-	86	68.707	ENSAMXG00000008146	rbm5	100	69.410	Astyanax_mexicanus
ENSSLDG00000015996	-	100	58.121	ENSBTAG00000006330	RBM5	100	60.606	Bos_taurus
ENSSLDG00000015996	-	100	58.353	ENSCJAG00000004740	RBM5	100	60.417	Callithrix_jacchus
ENSSLDG00000015996	-	100	58.353	ENSCAFG00000010866	RBM5	100	60.606	Canis_familiaris
ENSSLDG00000015996	-	100	58.353	ENSCAFG00020022126	RBM5	100	60.606	Canis_lupus_dingo
ENSSLDG00000015996	-	100	58.353	ENSCHIG00000018435	RBM5	100	60.723	Capra_hircus
ENSSLDG00000015996	-	86	55.676	ENSTSYG00000004158	RBM5	98	58.530	Carlito_syrichta
ENSSLDG00000015996	-	100	48.296	ENSCAPG00000013495	RBM5	100	48.832	Cavia_aperea
ENSSLDG00000015996	-	100	58.246	ENSCPOG00000008151	RBM5	100	60.373	Cavia_porcellus
ENSSLDG00000015996	-	99	58.226	ENSCCAG00000026401	RBM5	100	59.791	Cebus_capucinus
ENSSLDG00000015996	-	100	58.353	ENSCATG00000041038	RBM5	100	60.606	Cercocebus_atys
ENSSLDG00000015996	-	100	58.480	ENSCLAG00000007873	RBM5	100	60.373	Chinchilla_lanigera
ENSSLDG00000015996	-	100	58.353	ENSCSAG00000014401	RBM5	100	60.606	Chlorocebus_sabaeus
ENSSLDG00000015996	-	82	53.343	ENSCHOG00000009429	RBM5	85	54.765	Choloepus_hoffmanni
ENSSLDG00000015996	-	92	61.401	ENSCPBG00000002406	RBM5	100	59.839	Chrysemys_picta_bellii
ENSSLDG00000015996	-	100	57.949	ENSCANG00000031250	RBM5	100	59.766	Colobus_angolensis_palliatus
ENSSLDG00000015996	-	100	59.629	ENSCGRG00001010543	Rbm5	100	61.072	Cricetulus_griseus_chok1gshd
ENSSLDG00000015996	-	100	59.629	ENSCGRG00000008475	Rbm5	100	61.072	Cricetulus_griseus_crigri
ENSSLDG00000015996	-	98	64.120	ENSCSEG00000000596	rbm5	97	64.699	Cynoglossus_semilaevis
ENSSLDG00000015996	-	100	64.612	ENSCVAG00000005655	rbm5	100	64.571	Cyprinodon_variegatus
ENSSLDG00000015996	-	100	57.225	ENSDARG00000098280	rbm5	100	63.607	Danio_rerio
ENSSLDG00000015996	-	100	58.440	ENSDNOG00000011756	RBM5	100	60.606	Dasypus_novemcinctus
ENSSLDG00000015996	-	100	59.606	ENSDORG00000007692	Rbm5	100	60.256	Dipodomys_ordii
ENSSLDG00000015996	-	92	56.925	ENSETEG00000012773	RBM5	93	58.438	Echinops_telfairi
ENSSLDG00000015996	-	73	57.937	ENSEBUG00000017034	rbm5	95	57.672	Eptatretus_burgeri
ENSSLDG00000015996	-	100	58.237	ENSEASG00005011835	RBM5	100	60.606	Equus_asinus_asinus
ENSSLDG00000015996	-	100	58.237	ENSECAG00000020447	RBM5	100	60.606	Equus_caballus
ENSSLDG00000015996	-	80	72.772	ENSEEUG00000005943	RBM5	88	72.772	Erinaceus_europaeus
ENSSLDG00000015996	-	100	68.548	ENSELUG00000022467	rbm5	100	68.318	Esox_lucius
ENSSLDG00000015996	-	100	58.469	ENSFCAG00000014639	RBM5	100	60.606	Felis_catus
ENSSLDG00000015996	-	99	57.011	ENSFALG00000008828	RBM5	95	59.689	Ficedula_albicollis
ENSSLDG00000015996	-	100	58.246	ENSFDAG00000001897	RBM5	100	58.851	Fukomys_damarensis
ENSSLDG00000015996	-	92	82.927	ENSFHEG00000015954	rbm5	98	82.927	Fundulus_heteroclitus
ENSSLDG00000015996	-	99	64.061	ENSGMOG00000016224	rbm5	99	64.169	Gadus_morhua
ENSSLDG00000015996	-	100	59.504	ENSGMOG00000007810	-	100	59.408	Gadus_morhua
ENSSLDG00000015996	-	93	60.151	ENSGALG00000039288	RBM5	100	58.830	Gallus_gallus
ENSSLDG00000015996	-	100	65.789	ENSGAFG00000010690	rbm5	100	65.789	Gambusia_affinis
ENSSLDG00000015996	-	100	66.121	ENSGACG00000010469	rbm5	100	66.550	Gasterosteus_aculeatus
ENSSLDG00000015996	-	100	78.588	ENSGACG00000000858	-	100	78.353	Gasterosteus_aculeatus
ENSSLDG00000015996	-	95	58.213	ENSGAGG00000007935	RBM5	99	58.965	Gopherus_agassizii
ENSSLDG00000015996	-	100	58.528	ENSGGOG00000014490	RBM5	100	60.606	Gorilla_gorilla
ENSSLDG00000015996	-	89	95.122	ENSHBUG00000011901	-	98	95.122	Haplochromis_burtoni
ENSSLDG00000015996	-	100	66.743	ENSHBUG00000001941	rbm5	100	66.247	Haplochromis_burtoni
ENSSLDG00000015996	-	100	58.129	ENSHGLG00000014844	RBM5	100	59.324	Heterocephalus_glaber_female
ENSSLDG00000015996	-	100	58.072	ENSHGLG00100010739	RBM5	100	60.490	Heterocephalus_glaber_male
ENSSLDG00000015996	-	96	63.329	ENSHCOG00000017110	rbm5	99	65.139	Hippocampus_comes
ENSSLDG00000015996	-	100	67.340	ENSHCOG00000004536	-	100	67.340	Hippocampus_comes
ENSSLDG00000015996	-	100	66.821	ENSIPUG00000000640	rbm5	100	67.552	Ictalurus_punctatus
ENSSLDG00000015996	-	100	58.469	ENSSTOG00000013856	RBM5	100	60.839	Ictidomys_tridecemlineatus
ENSSLDG00000015996	-	100	58.469	ENSJJAG00000008844	Rbm5	100	60.956	Jaculus_jaculus
ENSSLDG00000015996	-	100	65.854	ENSKMAG00000006663	rbm5	100	65.629	Kryptolebias_marmoratus
ENSSLDG00000015996	-	100	79.976	ENSLBEG00000010877	-	94	79.976	Labrus_bergylta
ENSSLDG00000015996	-	59	78.549	ENSLBEG00000002522	-	84	83.214	Labrus_bergylta
ENSSLDG00000015996	-	100	65.938	ENSLBEG00000020858	rbm5	100	66.398	Labrus_bergylta
ENSSLDG00000015996	-	99	60.165	ENSLACG00000016572	RBM5	100	61.235	Latimeria_chalumnae
ENSSLDG00000015996	-	100	65.909	ENSLOCG00000010774	rbm5	100	66.818	Lepisosteus_oculatus
ENSSLDG00000015996	-	100	58.681	ENSLAFG00000006733	RBM5	100	60.462	Loxodonta_africana
ENSSLDG00000015996	-	100	58.353	ENSMFAG00000031609	RBM5	100	60.606	Macaca_fascicularis
ENSSLDG00000015996	-	99	58.226	ENSMMUG00000004921	RBM5	99	60.492	Macaca_mulatta
ENSSLDG00000015996	-	100	58.353	ENSMNEG00000044394	RBM5	100	60.606	Macaca_nemestrina
ENSSLDG00000015996	-	100	57.027	ENSMLEG00000034689	RBM5	100	59.907	Mandrillus_leucophaeus
ENSSLDG00000015996	-	91	80.488	ENSMAMG00000017277	rbm5	97	80.488	Mastacembelus_armatus
ENSSLDG00000015996	-	100	87.559	ENSMAMG00000023948	-	93	85.782	Mastacembelus_armatus
ENSSLDG00000015996	-	100	78.580	ENSMZEG00005010035	-	100	78.158	Maylandia_zebra
ENSSLDG00000015996	-	100	66.170	ENSMZEG00005015328	rbm5	100	66.819	Maylandia_zebra
ENSSLDG00000015996	-	93	59.874	ENSMGAG00000003972	RBM5	100	60.930	Meleagris_gallopavo
ENSSLDG00000015996	-	99	59.277	ENSMAUG00000020572	Rbm5	98	60.492	Mesocricetus_auratus
ENSSLDG00000015996	-	100	58.353	ENSMICG00000016179	RBM5	100	60.606	Microcebus_murinus
ENSSLDG00000015996	-	100	59.696	ENSMOCG00000017479	Rbm5	100	61.072	Microtus_ochrogaster
ENSSLDG00000015996	-	90	69.767	ENSMMOG00000021804	-	99	62.191	Mola_mola
ENSSLDG00000015996	-	100	59.661	ENSMMOG00000015342	rbm5	100	60.452	Mola_mola
ENSSLDG00000015996	-	100	60.047	ENSMODG00000012301	RBM5	100	61.027	Monodelphis_domestica
ENSSLDG00000015996	-	100	84.142	ENSMALG00000016769	-	100	83.314	Monopterus_albus
ENSSLDG00000015996	-	99	60.210	ENSMALG00000000609	rbm5	99	59.860	Monopterus_albus
ENSSLDG00000015996	-	100	59.604	MGP_CAROLIEiJ_G0032660	Rbm5	96	69.595	Mus_caroli
ENSSLDG00000015996	-	100	59.604	ENSMUSG00000032580	Rbm5	95	69.595	Mus_musculus
ENSSLDG00000015996	-	100	59.488	MGP_PahariEiJ_G0015528	Rbm5	90	73.381	Mus_pahari
ENSSLDG00000015996	-	100	59.488	MGP_SPRETEiJ_G0033805	Rbm5	96	69.595	Mus_spretus
ENSSLDG00000015996	-	100	58.382	ENSMLUG00000007875	RBM5	100	60.468	Myotis_lucifugus
ENSSLDG00000015996	-	100	57.974	ENSNGAG00000011777	Rbm5	100	60.140	Nannospalax_galili
ENSSLDG00000015996	-	98	71.651	ENSNBRG00000004400	RBM5	100	71.411	Neolamprologus_brichardi
ENSSLDG00000015996	-	100	65.826	ENSNBRG00000018097	rbm5	100	66.934	Neolamprologus_brichardi
ENSSLDG00000015996	-	100	58.353	ENSNLEG00000006943	RBM5	100	60.606	Nomascus_leucogenys
ENSSLDG00000015996	-	99	55.136	ENSMEUG00000012994	RBM5	99	57.008	Notamacropus_eugenii
ENSSLDG00000015996	-	92	57.557	ENSOPRG00000015154	RBM5	93	59.296	Ochotona_princeps
ENSSLDG00000015996	-	100	57.814	ENSODEG00000019111	-	100	58.099	Octodon_degus
ENSSLDG00000015996	-	100	58.314	ENSODEG00000016254	-	100	60.560	Octodon_degus
ENSSLDG00000015996	-	100	80.401	ENSONIG00000019007	RBM5	100	79.976	Oreochromis_niloticus
ENSSLDG00000015996	-	100	66.858	ENSONIG00000004107	rbm5	100	66.362	Oreochromis_niloticus
ENSSLDG00000015996	-	89	59.019	ENSOANG00000006557	RBM5	100	61.060	Ornithorhynchus_anatinus
ENSSLDG00000015996	-	100	58.480	ENSOCUG00000011652	RBM5	100	60.256	Oryctolagus_cuniculus
ENSSLDG00000015996	-	100	69.776	ENSORLG00000001053	-	100	69.421	Oryzias_latipes
ENSSLDG00000015996	-	95	65.426	ENSORLG00000003369	rbm5	99	64.727	Oryzias_latipes
ENSSLDG00000015996	-	100	65.933	ENSORLG00020021744	rbm5	100	65.162	Oryzias_latipes_hni
ENSSLDG00000015996	-	96	68.927	ENSORLG00020006782	-	98	68.681	Oryzias_latipes_hni
ENSSLDG00000015996	-	91	80.488	ENSORLG00015018379	rbm5	97	80.488	Oryzias_latipes_hsok
ENSSLDG00000015996	-	96	69.174	ENSORLG00015002854	-	98	68.681	Oryzias_latipes_hsok
ENSSLDG00000015996	-	68	77.835	ENSOMEG00000010653	-	89	77.835	Oryzias_melastigma
ENSSLDG00000015996	-	100	65.714	ENSOMEG00000002219	rbm5	100	65.865	Oryzias_melastigma
ENSSLDG00000015996	-	93	57.621	ENSOGAG00000004205	RBM5	100	59.527	Otolemur_garnettii
ENSSLDG00000015996	-	100	58.353	ENSOARG00000010923	RBM5	100	60.723	Ovis_aries
ENSSLDG00000015996	-	100	58.353	ENSPPAG00000043010	RBM5	100	60.606	Pan_paniscus
ENSSLDG00000015996	-	100	58.469	ENSPPRG00000005404	RBM5	100	60.606	Panthera_pardus
ENSSLDG00000015996	-	100	58.469	ENSPTIG00000000962	RBM5	100	60.606	Panthera_tigris_altaica
ENSSLDG00000015996	-	100	58.353	ENSPTRG00000014946	RBM5	100	60.606	Pan_troglodytes
ENSSLDG00000015996	-	100	58.353	ENSPANG00000018507	RBM5	100	60.606	Papio_anubis
ENSSLDG00000015996	-	78	57.165	ENSPKIG00000019187	-	100	56.535	Paramormyrops_kingsleyae
ENSSLDG00000015996	-	100	67.509	ENSPKIG00000024837	RBM5	100	67.394	Paramormyrops_kingsleyae
ENSSLDG00000015996	-	89	59.495	ENSPSIG00000016073	RBM5	100	61.273	Pelodiscus_sinensis
ENSSLDG00000015996	-	80	55.670	ENSPMGG00000017347	rbm5	100	55.425	Periophthalmus_magnuspinnatus
ENSSLDG00000015996	-	88	90.000	ENSPMGG00000004719	-	97	90.244	Periophthalmus_magnuspinnatus
ENSSLDG00000015996	-	99	42.827	ENSPMAG00000001998	rbm5	99	42.229	Petromyzon_marinus
ENSSLDG00000015996	-	100	59.485	ENSPCIG00000021531	RBM5	100	61.332	Phascolarctos_cinereus
ENSSLDG00000015996	-	100	65.143	ENSPLAG00000006318	rbm5	100	65.143	Poecilia_latipinna
ENSSLDG00000015996	-	100	64.948	ENSPMEG00000004295	rbm5	100	65.332	Poecilia_mexicana
ENSSLDG00000015996	-	75	61.719	ENSPMEG00000008651	rbm5	99	61.912	Poecilia_mexicana
ENSSLDG00000015996	-	100	65.450	ENSPREG00000003795	rbm5	100	65.222	Poecilia_reticulata
ENSSLDG00000015996	-	55	56.855	ENSPCAG00000005459	RBM5	70	55.760	Procavia_capensis
ENSSLDG00000015996	-	100	58.237	ENSPCOG00000025840	RBM5	100	60.606	Propithecus_coquereli
ENSSLDG00000015996	-	100	57.010	ENSPVAG00000006812	RBM5	100	58.858	Pteropus_vampyrus
ENSSLDG00000015996	-	100	66.628	ENSPNYG00000014787	rbm5	100	66.133	Pundamilia_nyererei
ENSSLDG00000015996	-	84	79.354	ENSPNYG00000006361	RBM5	99	78.852	Pundamilia_nyererei
ENSSLDG00000015996	-	100	66.821	ENSPNAG00000012070	rbm5	100	65.665	Pygocentrus_nattereri
ENSSLDG00000015996	-	100	59.814	ENSRNOG00000018153	Rbm5	100	60.373	Rattus_norvegicus
ENSSLDG00000015996	-	100	58.343	ENSRBIG00000012679	RBM5	100	60.490	Rhinopithecus_bieti
ENSSLDG00000015996	-	100	58.343	ENSRROG00000041331	RBM5	100	60.490	Rhinopithecus_roxellana
ENSSLDG00000015996	-	100	58.353	ENSSBOG00000006324	RBM5	100	60.606	Saimiri_boliviensis_boliviensis
ENSSLDG00000015996	-	100	59.836	ENSSHAG00000018260	RBM5	100	61.170	Sarcophilus_harrisii
ENSSLDG00000015996	-	100	69.131	ENSSFOG00015019645	-	100	69.484	Scleropages_formosus
ENSSLDG00000015996	-	100	67.520	ENSSFOG00015019052	rbm5	94	67.674	Scleropages_formosus
ENSSLDG00000015996	-	100	66.667	ENSSMAG00000017106	rbm5	100	67.130	Scophthalmus_maximus
ENSSLDG00000015996	-	100	66.820	ENSSDUG00000019775	rbm5	100	65.442	Seriola_dumerili
ENSSLDG00000015996	-	57	76.316	ENSSARG00000009724	-	63	77.333	Sorex_araneus
ENSSLDG00000015996	-	100	55.806	ENSSPUG00000001876	RBM5	100	55.699	Sphenodon_punctatus
ENSSLDG00000015996	-	100	65.376	ENSSPAG00000019638	rbm5	100	66.782	Stegastes_partitus
ENSSLDG00000015996	-	100	86.391	ENSSPAG00000020011	-	100	86.423	Stegastes_partitus
ENSSLDG00000015996	-	92	70.732	ENSSSCG00000011395	RBM5	98	70.732	Sus_scrofa
ENSSLDG00000015996	-	93	55.612	ENSTGUG00000006417	RBM5	99	54.964	Taeniopygia_guttata
ENSSLDG00000015996	-	100	66.244	ENSTRUG00000008292	rbm5	100	70.449	Takifugu_rubripes
ENSSLDG00000015996	-	99	49.443	ENSTNIG00000014742	rbm5	89	65.185	Tetraodon_nigroviridis
ENSSLDG00000015996	-	100	52.900	ENSTBEG00000005424	RBM5	100	55.245	Tupaia_belangeri
ENSSLDG00000015996	-	92	54.614	ENSTTRG00000007717	RBM5	100	56.206	Tursiops_truncatus
ENSSLDG00000015996	-	100	58.353	ENSUAMG00000028347	RBM5	100	60.723	Ursus_americanus
ENSSLDG00000015996	-	100	58.353	ENSUMAG00000022027	RBM5	100	60.723	Ursus_maritimus
ENSSLDG00000015996	-	90	55.769	ENSVPAG00000009388	RBM5	100	58.603	Vicugna_pacos
ENSSLDG00000015996	-	100	58.353	ENSVVUG00000028647	RBM5	100	60.606	Vulpes_vulpes
ENSSLDG00000015996	-	100	65.564	ENSXMAG00000016369	rbm5	100	65.450	Xiphophorus_maculatus