EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSLDG00000016030 (Gene tree)
Gene ID: -
Gene Symbol: rnaseh2c
Alias: fc08g11|im:5617510|si:dkey-147f20.5|wu:fc08g11
Full Name: ribonuclease H2 subunit C
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 6972 bases
Position: chrPEQF01098812.1:516576-523547
Accession: 111655846
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000020480	RNase_H2_suC	PF08615.11	5.7e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000021169	-	5058	XM_023407386	ENSSLDP00000020480	136 (aa)	XP_023263154	UPI000C6F920F

Gene Model

Click here to download ENSSLDG00000016030's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000016030's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000016030	rnaseh2c	100	93.382	ENSAPOG00000012901	rnaseh2c	99	93.382	Acanthochromis_polyacanthus
ENSSLDG00000016030	rnaseh2c	100	83.824	ENSACIG00000022433	rnaseh2c	100	83.824	Amphilophus_citrinellus
ENSSLDG00000016030	rnaseh2c	100	93.382	ENSAOCG00000016855	rnaseh2c	100	93.382	Amphiprion_ocellaris
ENSSLDG00000016030	rnaseh2c	100	94.118	ENSAPEG00000009850	rnaseh2c	100	94.118	Amphiprion_percula
ENSSLDG00000016030	rnaseh2c	100	91.912	ENSATEG00000014395	rnaseh2c	100	91.912	Anabas_testudineus
ENSSLDG00000016030	rnaseh2c	100	85.294	ENSACLG00000016950	rnaseh2c	100	85.294	Astatotilapia_calliptera
ENSSLDG00000016030	rnaseh2c	99	66.667	ENSAMXG00000001210	rnaseh2c	100	66.667	Astyanax_mexicanus
ENSSLDG00000016030	rnaseh2c	99	51.493	ENSCPBG00000023408	-	96	51.493	Chrysemys_picta_bellii
ENSSLDG00000016030	rnaseh2c	100	85.294	ENSCSEG00000005808	rnaseh2c	99	85.294	Cynoglossus_semilaevis
ENSSLDG00000016030	rnaseh2c	100	83.088	ENSCVAG00000006337	rnaseh2c	100	83.088	Cyprinodon_variegatus
ENSSLDG00000016030	rnaseh2c	100	68.382	ENSDARG00000089637	rnaseh2c	99	68.382	Danio_rerio
ENSSLDG00000016030	rnaseh2c	81	50.862	ENSEBUG00000014939	rnaseh2c	74	50.862	Eptatretus_burgeri
ENSSLDG00000016030	rnaseh2c	99	72.593	ENSELUG00000007345	rnaseh2c	99	72.593	Esox_lucius
ENSSLDG00000016030	rnaseh2c	96	82.308	ENSFHEG00000002419	rnaseh2c	95	82.308	Fundulus_heteroclitus
ENSSLDG00000016030	rnaseh2c	65	78.652	ENSGMOG00000008727	rnaseh2c	99	78.652	Gadus_morhua
ENSSLDG00000016030	rnaseh2c	100	82.353	ENSGAFG00000016755	rnaseh2c	83	82.353	Gambusia_affinis
ENSSLDG00000016030	rnaseh2c	99	52.174	ENSGAGG00000008193	-	96	51.493	Gopherus_agassizii
ENSSLDG00000016030	rnaseh2c	100	86.765	ENSHBUG00000012806	rnaseh2c	100	86.765	Haplochromis_burtoni
ENSSLDG00000016030	rnaseh2c	100	82.353	ENSHCOG00000007177	rnaseh2c	100	82.353	Hippocampus_comes
ENSSLDG00000016030	rnaseh2c	100	66.176	ENSIPUG00000018044	rnaseh2c	100	66.176	Ictalurus_punctatus
ENSSLDG00000016030	rnaseh2c	100	83.088	ENSKMAG00000004184	rnaseh2c	100	83.088	Kryptolebias_marmoratus
ENSSLDG00000016030	rnaseh2c	100	86.861	ENSLBEG00000005742	rnaseh2c	100	86.861	Labrus_bergylta
ENSSLDG00000016030	rnaseh2c	95	58.140	ENSLACG00000010120	-	93	57.576	Latimeria_chalumnae
ENSSLDG00000016030	rnaseh2c	100	86.765	ENSMAMG00000021610	rnaseh2c	100	86.765	Mastacembelus_armatus
ENSSLDG00000016030	rnaseh2c	100	86.029	ENSMZEG00005004796	rnaseh2c	100	86.029	Maylandia_zebra
ENSSLDG00000016030	rnaseh2c	100	88.235	ENSMMOG00000002869	rnaseh2c	100	88.235	Mola_mola
ENSSLDG00000016030	rnaseh2c	100	91.241	ENSMALG00000012198	rnaseh2c	100	91.241	Monopterus_albus
ENSSLDG00000016030	rnaseh2c	100	86.765	ENSNBRG00000001462	rnaseh2c	100	86.765	Neolamprologus_brichardi
ENSSLDG00000016030	rnaseh2c	100	86.029	ENSONIG00000005338	rnaseh2c	99	86.029	Oreochromis_niloticus
ENSSLDG00000016030	rnaseh2c	100	77.941	ENSORLG00000023473	rnaseh2c	100	77.941	Oryzias_latipes
ENSSLDG00000016030	rnaseh2c	100	77.941	ENSORLG00020019053	rnaseh2c	91	77.941	Oryzias_latipes_hni
ENSSLDG00000016030	rnaseh2c	100	78.676	ENSORLG00015017067	rnaseh2c	91	78.676	Oryzias_latipes_hsok
ENSSLDG00000016030	rnaseh2c	100	79.412	ENSOMEG00000018607	rnaseh2c	100	79.412	Oryzias_melastigma
ENSSLDG00000016030	rnaseh2c	100	61.765	ENSPKIG00000019331	rnaseh2c	100	61.765	Paramormyrops_kingsleyae
ENSSLDG00000016030	rnaseh2c	100	79.412	ENSPFOG00000009415	rnaseh2c	100	79.412	Poecilia_formosa
ENSSLDG00000016030	rnaseh2c	100	80.147	ENSPLAG00000023330	rnaseh2c	100	80.147	Poecilia_latipinna
ENSSLDG00000016030	rnaseh2c	100	80.147	ENSPMEG00000003696	rnaseh2c	100	80.147	Poecilia_mexicana
ENSSLDG00000016030	rnaseh2c	100	74.150	ENSPREG00000015384	rnaseh2c	73	74.150	Poecilia_reticulata
ENSSLDG00000016030	rnaseh2c	100	86.765	ENSPNYG00000014766	rnaseh2c	100	86.765	Pundamilia_nyererei
ENSSLDG00000016030	rnaseh2c	99	65.185	ENSPNAG00000019111	rnaseh2c	99	65.185	Pygocentrus_nattereri
ENSSLDG00000016030	rnaseh2c	99	69.630	ENSSFOG00015005760	rnaseh2c	99	69.630	Scleropages_formosus
ENSSLDG00000016030	rnaseh2c	100	91.912	ENSSMAG00000017738	rnaseh2c	100	91.912	Scophthalmus_maximus
ENSSLDG00000016030	rnaseh2c	100	98.529	ENSSDUG00000017285	rnaseh2c	100	98.529	Seriola_dumerili
ENSSLDG00000016030	rnaseh2c	96	50.376	ENSSPUG00000000842	-	89	49.265	Sphenodon_punctatus
ENSSLDG00000016030	rnaseh2c	100	89.706	ENSSPAG00000007536	rnaseh2c	100	89.706	Stegastes_partitus
ENSSLDG00000016030	rnaseh2c	100	81.618	ENSTRUG00000021845	rnaseh2c	100	81.618	Takifugu_rubripes
ENSSLDG00000016030	rnaseh2c	100	84.559	ENSTNIG00000000431	rnaseh2c	100	84.559	Tetraodon_nigroviridis
ENSSLDG00000016030	rnaseh2c	99	50.746	ENSXETG00000032466	-	98	50.746	Xenopus_tropicalis
ENSSLDG00000016030	rnaseh2c	100	80.882	ENSXCOG00000001611	rnaseh2c	100	80.882	Xiphophorus_couchianus
ENSSLDG00000016030	rnaseh2c	100	83.088	ENSXMAG00000003147	rnaseh2c	83	83.088	Xiphophorus_maculatus