EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSLDG00000016070 (Gene tree)
Gene ID: -
Gene Symbol: rc3h2
Alias: si:ch211-243g18.1
Full Name: roquin-2-like
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 27657 bases
Position: chrPEQF01098165.1:208734-236390
Accession: 111651524
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000020543	zf-CCCH	PF00642.24	7.1e-06	1	1
ENSSLDP00000020570	zf-CCCH	PF00642.24	7.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000021261	-	8343	XM_023401483	ENSSLDP00000020570	1155 (aa)	XP_023257251	UPI000C6FAEDC
ENSSLDT00000021234	-	8538	XM_023401484	ENSSLDP00000020543	1155 (aa)	XP_023257252	UPI000C6FAEDC

Gene Model

Click here to download ENSSLDG00000016070's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000016070's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000016070	rc3h2	93	56.392	ENSG00000056586	RC3H2	95	86.947	Homo_sapiens
ENSSLDG00000016070	rc3h2	100	93.691	ENSAPOG00000002117	rc3h2	100	93.777	Acanthochromis_polyacanthus
ENSSLDG00000016070	rc3h2	93	56.567	ENSAMEG00000006498	RC3H2	92	56.594	Ailuropoda_melanoleuca
ENSSLDG00000016070	rc3h2	100	93.772	ENSAPEG00000007757	rc3h2	100	93.858	Amphiprion_percula
ENSSLDG00000016070	rc3h2	100	91.530	ENSATEG00000019414	rc3h2	100	91.530	Anabas_testudineus
ENSSLDG00000016070	rc3h2	93	57.520	ENSAPLG00000013920	RC3H2	92	57.544	Anas_platyrhynchos
ENSSLDG00000016070	rc3h2	93	56.217	ENSANAG00000030862	RC3H2	95	86.947	Aotus_nancymaae
ENSSLDG00000016070	rc3h2	100	87.682	ENSACLG00000023136	rc3h2	100	87.682	Astatotilapia_calliptera
ENSSLDG00000016070	rc3h2	100	61.354	ENSAMXG00000006778	rc3h2	100	68.220	Astyanax_mexicanus
ENSSLDG00000016070	rc3h2	93	56.442	ENSBTAG00000023867	RC3H2	92	56.469	Bos_taurus
ENSSLDG00000016070	rc3h2	93	56.217	ENSCJAG00000020050	RC3H2	95	86.947	Callithrix_jacchus
ENSSLDG00000016070	rc3h2	93	56.491	ENSCAFG00020015288	RC3H2	95	86.947	Canis_lupus_dingo
ENSSLDG00000016070	rc3h2	93	56.442	ENSCHIG00000019319	RC3H2	92	56.469	Capra_hircus
ENSSLDG00000016070	rc3h2	84	50.391	ENSCAPG00000017086	RC3H2	93	50.097	Cavia_aperea
ENSSLDG00000016070	rc3h2	93	56.792	ENSCPOG00000008511	RC3H2	92	56.731	Cavia_porcellus
ENSSLDG00000016070	rc3h2	93	56.491	ENSCCAG00000001404	RC3H2	95	86.947	Cebus_capucinus
ENSSLDG00000016070	rc3h2	93	56.217	ENSCATG00000036655	RC3H2	95	86.947	Cercocebus_atys
ENSSLDG00000016070	rc3h2	93	56.792	ENSCLAG00000013261	RC3H2	92	56.731	Chinchilla_lanigera
ENSSLDG00000016070	rc3h2	81	53.504	ENSCSAG00000013416	RC3H2	91	53.543	Chlorocebus_sabaeus
ENSSLDG00000016070	rc3h2	93	57.055	ENSCPBG00000009811	RC3H2	92	57.168	Chrysemys_picta_bellii
ENSSLDG00000016070	rc3h2	93	56.217	ENSCANG00000043140	RC3H2	95	86.947	Colobus_angolensis_palliatus
ENSSLDG00000016070	rc3h2	93	56.480	ENSCGRG00001010006	Rc3h2	92	56.507	Cricetulus_griseus_chok1gshd
ENSSLDG00000016070	rc3h2	83	62.867	ENSCGRG00000009255	Rc3h2	77	62.911	Cricetulus_griseus_crigri
ENSSLDG00000016070	rc3h2	100	85.141	ENSCSEG00000017460	rc3h2	100	85.141	Cynoglossus_semilaevis
ENSSLDG00000016070	rc3h2	99	80.812	ENSCVAG00000012202	rc3h2	100	80.207	Cyprinodon_variegatus
ENSSLDG00000016070	rc3h2	100	62.143	ENSDARG00000063050	rc3h2	100	62.726	Danio_rerio
ENSSLDG00000016070	rc3h2	92	56.903	ENSDNOG00000014557	RC3H2	91	56.929	Dasypus_novemcinctus
ENSSLDG00000016070	rc3h2	93	56.906	ENSDORG00000006398	Rc3h2	92	56.844	Dipodomys_ordii
ENSSLDG00000016070	rc3h2	93	56.498	ENSEASG00005020897	RC3H2	99	78.750	Equus_asinus_asinus
ENSSLDG00000016070	rc3h2	93	56.579	ENSECAG00000022176	RC3H2	92	56.605	Equus_caballus
ENSSLDG00000016070	rc3h2	100	72.455	ENSELUG00000006105	rc3h2	100	72.626	Esox_lucius
ENSSLDG00000016070	rc3h2	93	56.667	ENSFCAG00000007375	RC3H2	92	56.693	Felis_catus
ENSSLDG00000016070	rc3h2	93	57.493	ENSFALG00000002011	RC3H2	92	57.568	Ficedula_albicollis
ENSSLDG00000016070	rc3h2	93	56.792	ENSFDAG00000012477	RC3H2	92	56.731	Fukomys_damarensis
ENSSLDG00000016070	rc3h2	99	81.536	ENSFHEG00000012272	rc3h2	100	81.158	Fundulus_heteroclitus
ENSSLDG00000016070	rc3h2	68	69.790	ENSGMOG00000016709	-	99	70.297	Gadus_morhua
ENSSLDG00000016070	rc3h2	93	57.932	ENSGALG00000001253	RC3H2	92	58.056	Gallus_gallus
ENSSLDG00000016070	rc3h2	96	81.908	ENSGAFG00000007679	rc3h2	100	81.458	Gambusia_affinis
ENSSLDG00000016070	rc3h2	74	84.120	ENSGACG00000017369	rc3h2	100	97.285	Gasterosteus_aculeatus
ENSSLDG00000016070	rc3h2	93	57.456	ENSGAGG00000018295	RC3H2	98	57.984	Gopherus_agassizii
ENSSLDG00000016070	rc3h2	92	56.549	ENSGGOG00000017062	RC3H2	95	86.947	Gorilla_gorilla
ENSSLDG00000016070	rc3h2	100	89.014	ENSHBUG00000003976	rc3h2	100	89.014	Haplochromis_burtoni
ENSSLDG00000016070	rc3h2	93	56.968	ENSHGLG00100018015	RC3H2	92	56.906	Heterocephalus_glaber_male
ENSSLDG00000016070	rc3h2	100	76.215	ENSHCOG00000003006	rc3h2	100	74.916	Hippocampus_comes
ENSSLDG00000016070	rc3h2	100	59.587	ENSIPUG00000021433	rc3h2	100	59.302	Ictalurus_punctatus
ENSSLDG00000016070	rc3h2	93	56.792	ENSSTOG00000010655	RC3H2	92	56.731	Ictidomys_tridecemlineatus
ENSSLDG00000016070	rc3h2	93	57.055	ENSJJAG00000022376	Rc3h2	92	57.005	Jaculus_jaculus
ENSSLDG00000016070	rc3h2	100	83.578	ENSKMAG00000010936	rc3h2	100	83.492	Kryptolebias_marmoratus
ENSSLDG00000016070	rc3h2	99	57.686	ENSLOCG00000002894	rc3h2	100	57.517	Lepisosteus_oculatus
ENSSLDG00000016070	rc3h2	92	57.143	ENSLAFG00000003521	RC3H2	91	57.168	Loxodonta_africana
ENSSLDG00000016070	rc3h2	84	87.330	ENSMFAG00000035621	RC3H2	95	86.947	Macaca_fascicularis
ENSSLDG00000016070	rc3h2	93	56.316	ENSMMUG00000021134	RC3H2	95	86.947	Macaca_mulatta
ENSSLDG00000016070	rc3h2	93	56.217	ENSMNEG00000031599	RC3H2	95	84.735	Macaca_nemestrina
ENSSLDG00000016070	rc3h2	93	56.316	ENSMLEG00000033809	RC3H2	95	86.947	Mandrillus_leucophaeus
ENSSLDG00000016070	rc3h2	100	88.927	ENSMZEG00005017019	rc3h2	100	88.927	Maylandia_zebra
ENSSLDG00000016070	rc3h2	93	57.830	ENSMGAG00000007984	RC3H2	92	57.955	Meleagris_gallopavo
ENSSLDG00000016070	rc3h2	73	62.338	ENSMAUG00000003117	Rc3h2	84	62.338	Mesocricetus_auratus
ENSSLDG00000016070	rc3h2	93	56.190	ENSMICG00000003227	RC3H2	95	86.726	Microcebus_murinus
ENSSLDG00000016070	rc3h2	93	56.430	ENSMOCG00000009592	Rc3h2	92	56.370	Microtus_ochrogaster
ENSSLDG00000016070	rc3h2	87	91.218	ENSMMOG00000021305	rc3h2	99	90.157	Mola_mola
ENSSLDG00000016070	rc3h2	93	57.756	ENSMODG00000019725	RC3H2	77	57.605	Monodelphis_domestica
ENSSLDG00000016070	rc3h2	93	57.592	MGP_CAROLIEiJ_G0023516	Rc3h2	95	87.168	Mus_caroli
ENSSLDG00000016070	rc3h2	93	56.830	ENSMUSG00000075376	Rc3h2	95	87.168	Mus_musculus
ENSSLDG00000016070	rc3h2	93	56.918	MGP_PahariEiJ_G0024969	Rc3h2	95	87.168	Mus_pahari
ENSSLDG00000016070	rc3h2	93	56.830	MGP_SPRETEiJ_G0024436	Rc3h2	95	87.168	Mus_spretus
ENSSLDG00000016070	rc3h2	93	56.667	ENSMPUG00000014141	RC3H2	92	56.780	Mustela_putorius_furo
ENSSLDG00000016070	rc3h2	93	56.716	ENSMLUG00000013992	RC3H2	92	56.830	Myotis_lucifugus
ENSSLDG00000016070	rc3h2	100	88.927	ENSNBRG00000009276	rc3h2	100	88.927	Neolamprologus_brichardi
ENSSLDG00000016070	rc3h2	92	56.018	ENSNLEG00000017204	RC3H2	95	86.947	Nomascus_leucogenys
ENSSLDG00000016070	rc3h2	53	86.957	ENSMEUG00000001299	-	56	86.957	Notamacropus_eugenii
ENSSLDG00000016070	rc3h2	67	57.478	ENSOPRG00000000135	RC3H2	74	57.531	Ochotona_princeps
ENSSLDG00000016070	rc3h2	100	88.109	ENSONIG00000003945	rc3h2	100	88.109	Oreochromis_niloticus
ENSSLDG00000016070	rc3h2	91	57.895	ENSOANG00000008194	RC3H2	99	57.970	Ornithorhynchus_anatinus
ENSSLDG00000016070	rc3h2	93	56.541	ENSOCUG00000008804	RC3H2	92	56.567	Oryctolagus_cuniculus
ENSSLDG00000016070	rc3h2	100	83.247	ENSORLG00000010018	rc3h2	100	83.161	Oryzias_latipes
ENSSLDG00000016070	rc3h2	100	83.161	ENSORLG00020013257	rc3h2	100	83.074	Oryzias_latipes_hni
ENSSLDG00000016070	rc3h2	100	83.420	ENSORLG00015001525	rc3h2	100	83.333	Oryzias_latipes_hsok
ENSSLDG00000016070	rc3h2	100	84.814	ENSOMEG00000023540	rc3h2	100	84.728	Oryzias_melastigma
ENSSLDG00000016070	rc3h2	93	56.693	ENSOGAG00000010678	RC3H2	92	56.719	Otolemur_garnettii
ENSSLDG00000016070	rc3h2	93	56.705	ENSOARG00000013965	RC3H2	92	56.731	Ovis_aries
ENSSLDG00000016070	rc3h2	93	56.217	ENSPPAG00000036013	RC3H2	95	86.947	Pan_paniscus
ENSSLDG00000016070	rc3h2	93	56.567	ENSPPRG00000008698	RC3H2	97	58.249	Panthera_pardus
ENSSLDG00000016070	rc3h2	93	56.567	ENSPTIG00000014257	RC3H2	97	58.249	Panthera_tigris_altaica
ENSSLDG00000016070	rc3h2	93	56.217	ENSPTRG00000021339	RC3H2	95	86.947	Pan_troglodytes
ENSSLDG00000016070	rc3h2	93	54.816	ENSPANG00000025840	RC3H2	94	83.407	Papio_anubis
ENSSLDG00000016070	rc3h2	99	66.149	ENSPKIG00000021910	rc3h2	96	65.805	Paramormyrops_kingsleyae
ENSSLDG00000016070	rc3h2	93	57.756	ENSPSIG00000005393	RC3H2	92	57.867	Pelodiscus_sinensis
ENSSLDG00000016070	rc3h2	85	95.034	ENSPMGG00000023963	rc3h2	95	95.034	Periophthalmus_magnuspinnatus
ENSSLDG00000016070	rc3h2	93	56.643	ENSPEMG00000023441	Rc3h2	92	56.582	Peromyscus_maniculatus_bairdii
ENSSLDG00000016070	rc3h2	83	87.557	ENSPCIG00000025559	RC3H2	90	87.557	Phascolarctos_cinereus
ENSSLDG00000016070	rc3h2	97	81.045	ENSPFOG00000019699	rc3h2	100	79.183	Poecilia_formosa
ENSSLDG00000016070	rc3h2	91	72.064	ENSPLAG00000005799	rc3h2	97	71.591	Poecilia_latipinna
ENSSLDG00000016070	rc3h2	97	81.311	ENSPMEG00000014187	rc3h2	97	81.200	Poecilia_mexicana
ENSSLDG00000016070	rc3h2	99	81.245	ENSPREG00000008979	rc3h2	100	80.726	Poecilia_reticulata
ENSSLDG00000016070	rc3h2	78	74.308	ENSPCAG00000010154	RC3H2	77	74.308	Procavia_capensis
ENSSLDG00000016070	rc3h2	100	87.938	ENSPNYG00000012063	rc3h2	100	87.938	Pundamilia_nyererei
ENSSLDG00000016070	rc3h2	100	63.636	ENSPNAG00000017502	rc3h2	100	63.504	Pygocentrus_nattereri
ENSSLDG00000016070	rc3h2	93	56.743	ENSRNOG00000009196	Rc3h2	95	56.681	Rattus_norvegicus
ENSSLDG00000016070	rc3h2	93	56.491	ENSRBIG00000032579	RC3H2	95	86.947	Rhinopithecus_bieti
ENSSLDG00000016070	rc3h2	93	56.404	ENSRROG00000043784	RC3H2	95	86.947	Rhinopithecus_roxellana
ENSSLDG00000016070	rc3h2	93	56.070	ENSSBOG00000029100	RC3H2	95	86.947	Saimiri_boliviensis_boliviensis
ENSSLDG00000016070	rc3h2	92	57.723	ENSSHAG00000007498	RC3H2	91	57.746	Sarcophilus_harrisii
ENSSLDG00000016070	rc3h2	100	91.983	ENSSMAG00000020048	rc3h2	100	91.897	Scophthalmus_maximus
ENSSLDG00000016070	rc3h2	100	99.567	ENSSDUG00000016022	rc3h2	100	99.567	Seriola_dumerili
ENSSLDG00000016070	rc3h2	93	56.705	ENSSARG00000012329	RC3H2	92	56.731	Sorex_araneus
ENSSLDG00000016070	rc3h2	93	57.331	ENSSPUG00000001457	RC3H2	92	57.356	Sphenodon_punctatus
ENSSLDG00000016070	rc3h2	100	94.810	ENSSPAG00000005233	rc3h2	100	94.810	Stegastes_partitus
ENSSLDG00000016070	rc3h2	93	56.529	ENSSSCG00000005575	RC3H2	93	86.726	Sus_scrofa
ENSSLDG00000016070	rc3h2	93	57.406	ENSTGUG00000006889	-	92	57.655	Taeniopygia_guttata
ENSSLDG00000016070	rc3h2	85	75.176	ENSTNIG00000004942	rc3h2	98	74.898	Tetraodon_nigroviridis
ENSSLDG00000016070	rc3h2	71	62.766	ENSTBEG00000009622	RC3H2	79	62.928	Tupaia_belangeri
ENSSLDG00000016070	rc3h2	87	67.228	ENSTTRG00000016954	RC3H2	85	67.270	Tursiops_truncatus
ENSSLDG00000016070	rc3h2	93	56.667	ENSUAMG00000015355	RC3H2	92	56.693	Ursus_americanus
ENSSLDG00000016070	rc3h2	93	56.667	ENSUMAG00000003161	RC3H2	95	86.947	Ursus_maritimus
ENSSLDG00000016070	rc3h2	93	56.354	ENSVPAG00000005994	RC3H2	92	56.381	Vicugna_pacos
ENSSLDG00000016070	rc3h2	93	56.491	ENSVVUG00000009519	RC3H2	95	56.518	Vulpes_vulpes
ENSSLDG00000016070	rc3h2	99	68.359	ENSXCOG00000005002	rc3h2	94	97.052	Xiphophorus_couchianus
ENSSLDG00000016070	rc3h2	99	81.850	ENSXMAG00000001724	rc3h2	100	81.212	Xiphophorus_maculatus