EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSLDG00000016151 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
splicing factor U2AF 65 kDa subunit-like
Gene Type
protein_coding
Species
Seriola_lalandi_dorsalis
Status
putative
Strand
Plus strand
Length
11519 bases
Position
chrPEQF01098998.1:2292265-2303783
Accession
111660611
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSLDP00000020671RRM_1PF00076.228.1e-3013
ENSSLDP00000020671RRM_1PF00076.228.1e-3023
ENSSLDP00000020671RRM_1PF00076.228.1e-3033
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSLDT00000021362-1401XM_023413972ENSSLDP00000020671466 (aa)XP_023269740-
Gene Model
Click here to download ENSSLDG00000016151's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000016151's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSLDG00000016151-8679.012ENSSLDG00000022742u2af2a9673.707
ENSSLDG00000016151-6438.235ENSSLDG00000024011puf60b5238.235
ENSSLDG00000016151-6336.000ENSSLDG00000007366-6736.000
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSLDG00000016151-8978.313ENSG00000063244U2AF29980.757Homo_sapiens
ENSSLDG00000016151-9996.963ENSAPOG00000002208-9796.963Acanthochromis_polyacanthus
ENSSLDG00000016151-6875.375ENSAPOG00000023155u2af2a9975.375Acanthochromis_polyacanthus
ENSSLDG00000016151-8077.212ENSAMEG00000003864U2AF210073.522Ailuropoda_melanoleuca
ENSSLDG00000016151-8380.051ENSACIG00000005749u2af2a9278.624Amphilophus_citrinellus
ENSSLDG00000016151-10096.567ENSACIG00000014173-10096.567Amphilophus_citrinellus
ENSSLDG00000016151-8679.259ENSAOCG00000015571u2af2a9673.922Amphiprion_ocellaris
ENSSLDG00000016151-9997.397ENSAOCG00000003595-9797.397Amphiprion_ocellaris
ENSSLDG00000016151-9995.887ENSAPEG00000020062-9795.887Amphiprion_percula
ENSSLDG00000016151-8380.307ENSAPEG00000009376u2af2a9378.870Amphiprion_percula
ENSSLDG00000016151-10096.567ENSATEG00000020577-10096.567Anabas_testudineus
ENSSLDG00000016151-9076.887ENSATEG00000022332u2af2a9673.707Anabas_testudineus
ENSSLDG00000016151-8679.412ENSACAG00000015489U2AF29674.304Anolis_carolinensis
ENSSLDG00000016151-7883.636ENSANAG00000028042U2AF29672.626Aotus_nancymaae
ENSSLDG00000016151-9997.180ENSACLG00000020793-9797.180Astatotilapia_calliptera
ENSSLDG00000016151-8679.012ENSACLG00000022181u2af2a9278.624Astatotilapia_calliptera
ENSSLDG00000016151-8678.079ENSAMXG00000039454u2af2b9671.520Astyanax_mexicanus
ENSSLDG00000016151-8377.750ENSAMXG00000033347u2af2a9670.253Astyanax_mexicanus
ENSSLDG00000016151-8978.043ENSBTAG00000002830U2AF29674.627Bos_taurus
ENSSLDG00000016151-8655.721WBGene00006697uaf-110054.795Caenorhabditis_elegans
ENSSLDG00000016151-8977.804ENSCJAG00000017128U2AF29873.461Callithrix_jacchus
ENSSLDG00000016151-8978.313ENSCAFG00000002551U2AF29674.839Canis_familiaris
ENSSLDG00000016151-8679.462ENSCAFG00020015445U2AF29773.109Canis_lupus_dingo
ENSSLDG00000016151-8666.990ENSCHIG00000023595U2AF28766.990Capra_hircus
ENSSLDG00000016151-8977.804ENSTSYG00000007432U2AF29973.932Carlito_syrichta
ENSSLDG00000016151-8978.043ENSCAPG00000008466U2AF29974.573Cavia_aperea
ENSSLDG00000016151-8978.043ENSCPOG00000001582U2AF29674.627Cavia_porcellus
ENSSLDG00000016151-8977.804ENSCCAG00000023336U2AF29674.414Cebus_capucinus
ENSSLDG00000016151-8978.313ENSCATG00000004637U2AF29674.839Cercocebus_atys
ENSSLDG00000016151-8978.313ENSCLAG00000000596U2AF29674.839Chinchilla_lanigera
ENSSLDG00000016151-8978.313ENSCSAG00000001722U2AF29674.839Chlorocebus_sabaeus
ENSSLDG00000016151-8977.230ENSCPBG00000004485U2AF29980.757Chrysemys_picta_bellii
ENSSLDG00000016151-8569.173ENSCING00000003455-8763.871Ciona_intestinalis
ENSSLDG00000016151-8667.082ENSCSAVG00000006813-9560.888Ciona_savignyi
ENSSLDG00000016151-9069.954ENSCANG00000043845-9670.878Colobus_angolensis_palliatus
ENSSLDG00000016151-8078.016ENSCANG00000031002-9374.232Colobus_angolensis_palliatus
ENSSLDG00000016151-8977.804ENSCGRG00001003185-9674.414Cricetulus_griseus_chok1gshd
ENSSLDG00000016151-8974.217ENSCGRG00001007486-9570.306Cricetulus_griseus_chok1gshd
ENSSLDG00000016151-8974.217ENSCGRG00000018587-9570.306Cricetulus_griseus_crigri
ENSSLDG00000016151-5476.984ENSCGRG00000004524-8274.621Cricetulus_griseus_crigri
ENSSLDG00000016151-6475.000ENSCSEG00000018709u2af2a9675.000Cynoglossus_semilaevis
ENSSLDG00000016151-9989.588ENSCSEG00000020504-9189.805Cynoglossus_semilaevis
ENSSLDG00000016151-9995.445ENSCVAG00000023307-9795.445Cyprinodon_variegatus
ENSSLDG00000016151-8778.922ENSCVAG00000001259u2af2a9673.922Cyprinodon_variegatus
ENSSLDG00000016151-8976.056ENSDARG00000011740u2af2b9571.828Danio_rerio
ENSSLDG00000016151-8379.082ENSDARG00000012505u2af2a9671.154Danio_rerio
ENSSLDG00000016151-8078.016ENSDNOG00000047039U2AF29274.232Dasypus_novemcinctus
ENSSLDG00000016151-8977.804ENSDORG00000003250U2af29674.414Dipodomys_ordii
ENSSLDG00000016151-8570.677FBgn0005411U2af5010070.712Drosophila_melanogaster
ENSSLDG00000016151-8452.657FBgn0034834LS28752.657Drosophila_melanogaster
ENSSLDG00000016151-8961.667ENSEBUG00000001732U2AF29658.280Eptatretus_burgeri
ENSSLDG00000016151-9169.860ENSEBUG00000010917U2AF29667.024Eptatretus_burgeri
ENSSLDG00000016151-8679.607ENSEASG00005020708U2AF29073.885Equus_asinus_asinus
ENSSLDG00000016151-8580.402ENSECAG00000010110U2AF29674.138Equus_caballus
ENSSLDG00000016151-9990.672ENSELUG00000018459-9790.672Esox_lucius
ENSSLDG00000016151-9073.660ENSELUG00000022291u2af2b9470.299Esox_lucius
ENSSLDG00000016151-9075.058ENSELUG00000015850u2af2a9672.246Esox_lucius
ENSSLDG00000016151-8977.804ENSFCAG00000011504U2AF29674.414Felis_catus
ENSSLDG00000016151-8978.043ENSFDAG00000011264U2AF29674.573Fukomys_damarensis
ENSSLDG00000016151-8877.143ENSFHEG00000016025u2af2a9673.491Fundulus_heteroclitus
ENSSLDG00000016151-8380.102ENSGMOG00000004535u2af2a9672.222Gadus_morhua
ENSSLDG00000016151-8579.597ENSGALG00000052748U2AF26374.342Gallus_gallus
ENSSLDG00000016151-9991.757ENSGAFG00000005628-9791.106Gambusia_affinis
ENSSLDG00000016151-8778.922ENSGAFG00000013626u2af2a8573.922Gambusia_affinis
ENSSLDG00000016151-9884.348ENSGACG00000014500-9785.408Gasterosteus_aculeatus
ENSSLDG00000016151-8380.307ENSGACG00000010632U2AF29673.118Gasterosteus_aculeatus
ENSSLDG00000016151-6880.757ENSGAGG00000011849U2AF29980.757Gopherus_agassizii
ENSSLDG00000016151-5771.161ENSGGOG00000036399-9671.161Gorilla_gorilla
ENSSLDG00000016151-8679.012ENSHBUG00000013935u2af2a9278.624Haplochromis_burtoni
ENSSLDG00000016151-9997.180ENSHBUG00000017424-9797.180Haplochromis_burtoni
ENSSLDG00000016151-8977.804ENSHGLG00000005889U2AF29674.414Heterocephalus_glaber_female
ENSSLDG00000016151-8977.804ENSHGLG00100004757U2AF29974.359Heterocephalus_glaber_male
ENSSLDG00000016151-9075.058ENSHCOG00000019367u2af2a9672.399Hippocampus_comes
ENSSLDG00000016151-10084.335ENSIPUG00000009844-9684.165Ictalurus_punctatus
ENSSLDG00000016151-8678.660ENSIPUG00000009077u2af29572.258Ictalurus_punctatus
ENSSLDG00000016151-8378.061ENSIPUG00000007717u2af2a8676.528Ictalurus_punctatus
ENSSLDG00000016151-8977.804ENSSTOG00000019595U2AF29674.414Ictidomys_tridecemlineatus
ENSSLDG00000016151-8977.804ENSJJAG00000017705U2af29674.414Jaculus_jaculus
ENSSLDG00000016151-9076.887ENSKMAG00000005960u2af2a9973.434Kryptolebias_marmoratus
ENSSLDG00000016151-9076.651ENSLBEG00000016162u2af2a9673.707Labrus_bergylta
ENSSLDG00000016151-9995.445ENSLBEG00000005001-9995.445Labrus_bergylta
ENSSLDG00000016151-8080.637ENSLACG00000001648U2AF29980.637Latimeria_chalumnae
ENSSLDG00000016151-9989.588ENSLOCG00000010843-9789.588Lepisosteus_oculatus
ENSSLDG00000016151-6279.791ENSLOCG00000008050u2af2b9469.774Lepisosteus_oculatus
ENSSLDG00000016151-8879.075ENSLAFG00000018056-9674.839Loxodonta_africana
ENSSLDG00000016151-9868.534ENSLAFG00000028496-9668.182Loxodonta_africana
ENSSLDG00000016151-8977.804ENSMFAG00000038383U2AF29674.414Macaca_fascicularis
ENSSLDG00000016151-8977.566ENSMMUG00000004810U2AF29674.200Macaca_mulatta
ENSSLDG00000016151-8978.313ENSMNEG00000042096U2AF29873.461Macaca_nemestrina
ENSSLDG00000016151-8978.313ENSMLEG00000032219U2AF28974.573Mandrillus_leucophaeus
ENSSLDG00000016151-9994.143ENSMAMG00000020158-9694.143Mastacembelus_armatus
ENSSLDG00000016151-8678.102ENSMAMG00000019817u2af2a9972.331Mastacembelus_armatus
ENSSLDG00000016151-9997.180ENSMZEG00005023318-9797.180Maylandia_zebra
ENSSLDG00000016151-8679.012ENSMZEG00005016563u2af2a9673.707Maylandia_zebra
ENSSLDG00000016151-8977.804ENSMAUG00000008180U2af29874.414Mesocricetus_auratus
ENSSLDG00000016151-8978.313ENSMICG00000027681U2AF29973.673Microcebus_murinus
ENSSLDG00000016151-8977.804ENSMOCG00000013214-9674.414Microtus_ochrogaster
ENSSLDG00000016151-6877.918ENSMOCG00000001018-9977.918Microtus_ochrogaster
ENSSLDG00000016151-9968.094ENSMOCG00000007227-8473.945Microtus_ochrogaster
ENSSLDG00000016151-8588.945ENSMMOG00000000531-8788.670Mola_mola
ENSSLDG00000016151-8380.307ENSMMOG00000016600u2af2a9178.870Mola_mola
ENSSLDG00000016151-9077.123ENSMALG00000009985u2af2a9673.707Monopterus_albus
ENSSLDG00000016151-8978.313MGP_CAROLIEiJ_G0029150U2af29674.839Mus_caroli
ENSSLDG00000016151-8978.313ENSMUSG00000030435U2af29980.757Mus_musculus
ENSSLDG00000016151-8978.313MGP_PahariEiJ_G0021017U2af29674.839Mus_pahari
ENSSLDG00000016151-8978.313MGP_SPRETEiJ_G0030203U2af29674.839Mus_spretus
ENSSLDG00000016151-8978.313ENSMPUG00000007135U2AF29674.839Mustela_putorius_furo
ENSSLDG00000016151-5375.697ENSMLUG00000011051-9975.697Myotis_lucifugus
ENSSLDG00000016151-8977.804ENSNGAG00000020369U2af29674.414Nannospalax_galili
ENSSLDG00000016151-9997.854ENSNBRG00000011100-10097.854Neolamprologus_brichardi
ENSSLDG00000016151-8679.012ENSNBRG00000002568u2af2a9278.624Neolamprologus_brichardi
ENSSLDG00000016151-8969.596ENSNLEG00000010562U2AF29980.757Nomascus_leucogenys
ENSSLDG00000016151-8967.229ENSMEUG00000002346U2AF29964.871Notamacropus_eugenii
ENSSLDG00000016151-9855.098ENSODEG00000009254-8363.395Octodon_degus
ENSSLDG00000016151-8972.076ENSODEG00000012729-9669.296Octodon_degus
ENSSLDG00000016151-9997.180ENSONIG00000009682-9797.180Oreochromis_niloticus
ENSSLDG00000016151-9275.231ENSONIG00000012793u2af2a9672.961Oreochromis_niloticus
ENSSLDG00000016151-9076.887ENSORLG00000011545u2af2a9772.727Oryzias_latipes
ENSSLDG00000016151-9076.887ENSORLG00020006941u2af2a9772.727Oryzias_latipes_hni
ENSSLDG00000016151-9076.887ENSORLG00015012843u2af2a9672.629Oryzias_latipes_hsok
ENSSLDG00000016151-9076.887ENSOMEG00000011386u2af2a9973.799Oryzias_melastigma
ENSSLDG00000016151-8977.804ENSOGAG00000007206-9674.414Otolemur_garnettii
ENSSLDG00000016151-9248.188ENSOGAG00000034729-8153.000Otolemur_garnettii
ENSSLDG00000016151-9865.432ENSOARG00000001091U2AF28573.850Ovis_aries
ENSSLDG00000016151-8977.804ENSPPAG00000039782U2AF29674.414Pan_paniscus
ENSSLDG00000016151-8977.804ENSPPRG00000013843U2AF29674.414Panthera_pardus
ENSSLDG00000016151-9968.657ENSPTIG00000005489U2AF28774.396Panthera_tigris_altaica
ENSSLDG00000016151-8977.804ENSPTRG00000011523U2AF29980.757Pan_troglodytes
ENSSLDG00000016151-8978.313ENSPANG00000008459U2AF29674.839Papio_anubis
ENSSLDG00000016151-8976.359ENSPKIG00000024346u2af2b9771.552Paramormyrops_kingsleyae
ENSSLDG00000016151-9989.371ENSPKIG00000014878-9789.371Paramormyrops_kingsleyae
ENSSLDG00000016151-8660.000ENSPSIG00000008014U2AF29957.292Pelodiscus_sinensis
ENSSLDG00000016151-8375.703ENSPMGG00000022980u2af2a9969.546Periophthalmus_magnuspinnatus
ENSSLDG00000016151-8977.804ENSPEMG00000007378U2af29980.757Peromyscus_maniculatus_bairdii
ENSSLDG00000016151-8376.456ENSPMAG00000004097u2af2a10071.975Petromyzon_marinus
ENSSLDG00000016151-8978.043ENSPCIG00000018013U2AF29674.627Phascolarctos_cinereus
ENSSLDG00000016151-8778.922ENSPFOG00000010799u2af2a9673.922Poecilia_formosa
ENSSLDG00000016151-9692.857ENSPFOG00000006433-9792.191Poecilia_formosa
ENSSLDG00000016151-8778.922ENSPLAG00000014365u2af2a9673.922Poecilia_latipinna
ENSSLDG00000016151-9692.857ENSPLAG00000003275-9892.208Poecilia_latipinna
ENSSLDG00000016151-9692.411ENSPMEG00000003734-9891.775Poecilia_mexicana
ENSSLDG00000016151-8778.922ENSPMEG00000002969u2af2a9673.922Poecilia_mexicana
ENSSLDG00000016151-8778.922ENSPREG00000008739u2af2a9973.434Poecilia_reticulata
ENSSLDG00000016151-9994.794ENSPREG00000013036-10097.260Poecilia_reticulata
ENSSLDG00000016151-6079.298ENSPPYG00000010429-7779.298Pongo_abelii
ENSSLDG00000016151-8962.143ENSPCAG00000014399-9660.426Procavia_capensis
ENSSLDG00000016151-8670.720ENSPCAG00000003709-9670.720Procavia_capensis
ENSSLDG00000016151-8977.804ENSPCOG00000025870U2AF29973.673Propithecus_coquereli
ENSSLDG00000016151-8977.566ENSPVAG00000004540U2AF29674.200Pteropus_vampyrus
ENSSLDG00000016151-8679.012ENSPNYG00000001438u2af2a9278.624Pundamilia_nyererei
ENSSLDG00000016151-9997.180ENSPNYG00000011605-9797.180Pundamilia_nyererei
ENSSLDG00000016151-8679.208ENSPNAG00000027289u2af2b9672.473Pygocentrus_nattereri
ENSSLDG00000016151-9992.408ENSPNAG00000007182-9792.408Pygocentrus_nattereri
ENSSLDG00000016151-8379.847ENSPNAG00000017620u2af2a9371.613Pygocentrus_nattereri
ENSSLDG00000016151-8978.313ENSRNOG00000015914U2af29674.839Rattus_norvegicus
ENSSLDG00000016151-8977.566ENSRBIG00000041018U2AF29674.200Rhinopithecus_bieti
ENSSLDG00000016151-8174.372ENSRROG00000031103-10073.882Rhinopithecus_roxellana
ENSSLDG00000016151-9070.481ENSRROG00000031238-9670.538Rhinopithecus_roxellana
ENSSLDG00000016151-8978.313ENSSBOG00000023891U2AF29674.839Saimiri_boliviensis_boliviensis
ENSSLDG00000016151-5368.707ENSSHAG00000001167U2AF28659.326Sarcophilus_harrisii
ENSSLDG00000016151-8779.115ENSSFOG00015019182u2af2b8979.115Scleropages_formosus
ENSSLDG00000016151-9989.371ENSSFOG00015003884-9789.371Scleropages_formosus
ENSSLDG00000016151-9995.228ENSSMAG00000013779-9795.228Scophthalmus_maximus
ENSSLDG00000016151-9274.429ENSSMAG00000012582u2af2a9672.629Scophthalmus_maximus
ENSSLDG00000016151-8679.012ENSSDUG00000009457u2af2a9673.707Seriola_dumerili
ENSSLDG00000016151-10099.785ENSSDUG00000021434-9599.785Seriola_dumerili
ENSSLDG00000016151-8678.208ENSSPUG00000010229U2AF29672.881Sphenodon_punctatus
ENSSLDG00000016151-9997.180ENSSPAG00000005241-9797.180Stegastes_partitus
ENSSLDG00000016151-8679.259ENSSPAG00000022519u2af2a9773.291Stegastes_partitus
ENSSLDG00000016151-8978.313ENSSSCG00000034815U2AF29674.839Sus_scrofa
ENSSLDG00000016151-8378.517ENSTRUG00000005514u2af2a9871.983Takifugu_rubripes
ENSSLDG00000016151-9076.832ENSTNIG00000008106U2AF29673.707Tetraodon_nigroviridis
ENSSLDG00000016151-8789.216ENSTNIG00000011257-9786.393Tetraodon_nigroviridis
ENSSLDG00000016151-7974.866ENSTBEG00000009104U2AF29775.815Tupaia_belangeri
ENSSLDG00000016151-8977.804ENSTTRG00000000987U2AF29674.414Tursiops_truncatus
ENSSLDG00000016151-8679.607ENSUAMG00000019883U2AF29974.082Ursus_americanus
ENSSLDG00000016151-8679.607ENSUMAG00000024586U2AF29980.757Ursus_maritimus
ENSSLDG00000016151-8978.313ENSVVUG00000006956U2AF26774.573Vulpes_vulpes
ENSSLDG00000016151-8580.151ENSXETG00000019128u2af29673.922Xenopus_tropicalis
ENSSLDG00000016151-8380.307ENSXCOG00000019406u2af2a9973.799Xiphophorus_couchianus
ENSSLDG00000016151-9794.457ENSXMAG00000000768-9294.360Xiphophorus_maculatus
ENSSLDG00000016151-8778.922ENSXMAG00000011979u2af2a9673.922Xiphophorus_maculatus

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