EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000016257 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 3869 bases
Position: chrPEQF01099431.1:542475-546343
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000020790	S10_plectin	PF03501.15	1.6e-35	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000021483	-	531	-	ENSSLDP00000020790	176 (aa)	-	-

Gene Model

Click here to download ENSSLDG00000016257's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000016257's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000016257	-	72	60.741	ENSSLDG00000012473	-	87	60.741
ENSSLDG00000016257	-	63	50.442	ENSSLDG00000005134	rps10	97	41.860

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000016257	-	64	63.025	ENSAPOG00000014059	-	82	63.025	Acanthochromis_polyacanthus
ENSSLDG00000016257	-	81	61.268	ENSAPOG00000016494	-	71	61.268	Acanthochromis_polyacanthus
ENSSLDG00000016257	-	79	65.468	ENSACIG00000019704	-	70	65.468	Amphilophus_citrinellus
ENSSLDG00000016257	-	73	60.448	ENSACIG00000013806	-	74	60.448	Amphilophus_citrinellus
ENSSLDG00000016257	-	58	73.529	ENSAOCG00000007730	-	60	73.529	Amphiprion_ocellaris
ENSSLDG00000016257	-	81	58.278	ENSAOCG00000011000	-	88	58.278	Amphiprion_ocellaris
ENSSLDG00000016257	-	50	62.500	ENSAPEG00000017745	-	56	62.500	Amphiprion_percula
ENSSLDG00000016257	-	58	68.627	ENSAPEG00000019531	-	58	68.627	Amphiprion_percula
ENSSLDG00000016257	-	59	76.699	ENSATEG00000004340	-	73	76.699	Anabas_testudineus
ENSSLDG00000016257	-	91	60.736	ENSACLG00000001013	-	94	60.736	Astatotilapia_calliptera
ENSSLDG00000016257	-	69	61.417	ENSAMXG00000037914	-	77	61.417	Astyanax_mexicanus
ENSSLDG00000016257	-	82	40.000	WBGene00004479	rps-10	89	40.000	Caenorhabditis_elegans
ENSSLDG00000016257	-	84	42.208	ENSCING00000006180	-	88	42.208	Ciona_intestinalis
ENSSLDG00000016257	-	68	62.698	ENSCSEG00000009179	-	74	62.698	Cynoglossus_semilaevis
ENSSLDG00000016257	-	82	45.833	FBgn0285947	RpS10b	84	45.833	Drosophila_melanogaster
ENSSLDG00000016257	-	56	48.980	FBgn0027494	RpS10a	83	39.474	Drosophila_melanogaster
ENSSLDG00000016257	-	73	49.219	ENSEBUG00000015221	-	80	49.219	Eptatretus_burgeri
ENSSLDG00000016257	-	86	48.795	ENSEASG00005009727	-	73	48.795	Equus_asinus_asinus
ENSSLDG00000016257	-	59	62.136	ENSECAG00000039725	-	50	62.136	Equus_caballus
ENSSLDG00000016257	-	68	60.000	ENSFHEG00000008769	-	78	60.000	Fundulus_heteroclitus
ENSSLDG00000016257	-	69	60.938	ENSGAFG00000001335	-	66	60.938	Gambusia_affinis
ENSSLDG00000016257	-	68	65.600	ENSHBUG00000023819	-	80	64.394	Haplochromis_burtoni
ENSSLDG00000016257	-	91	60.736	ENSHBUG00000018067	-	94	60.736	Haplochromis_burtoni
ENSSLDG00000016257	-	74	75.573	ENSLBEG00000020432	-	86	75.573	Labrus_bergylta
ENSSLDG00000016257	-	78	56.552	ENSLACG00000010998	-	83	56.552	Latimeria_chalumnae
ENSSLDG00000016257	-	91	60.736	ENSMZEG00005026198	-	94	60.736	Maylandia_zebra
ENSSLDG00000016257	-	68	64.800	ENSMZEG00005007838	-	80	63.636	Maylandia_zebra
ENSSLDG00000016257	-	55	70.103	ENSMMOG00000003228	-	55	70.103	Mola_mola
ENSSLDG00000016257	-	93	59.146	ENSMMOG00000014380	-	81	59.146	Mola_mola
ENSSLDG00000016257	-	58	76.471	ENSMALG00000015614	-	63	76.471	Monopterus_albus
ENSSLDG00000016257	-	91	60.123	ENSNBRG00000016554	-	94	60.123	Neolamprologus_brichardi
ENSSLDG00000016257	-	68	64.800	ENSNBRG00000008848	-	98	60.284	Neolamprologus_brichardi
ENSSLDG00000016257	-	81	54.967	ENSPKIG00000013061	-	83	54.967	Paramormyrops_kingsleyae
ENSSLDG00000016257	-	68	62.400	ENSPMGG00000017071	-	67	62.400	Periophthalmus_magnuspinnatus
ENSSLDG00000016257	-	59	62.500	ENSPMAG00000010266	-	56	62.500	Petromyzon_marinus
ENSSLDG00000016257	-	64	51.327	ENSPMAG00000003064	-	70	51.327	Petromyzon_marinus
ENSSLDG00000016257	-	72	57.480	ENSPLAG00000012690	-	61	66.667	Poecilia_latipinna
ENSSLDG00000016257	-	91	61.350	ENSPNYG00000006286	-	94	61.350	Pundamilia_nyererei
ENSSLDG00000016257	-	68	64.800	ENSPNYG00000012665	-	80	63.636	Pundamilia_nyererei
ENSSLDG00000016257	-	81	59.155	ENSPNAG00000021290	-	80	59.155	Pygocentrus_nattereri
ENSSLDG00000016257	-	57	43.564	YMR230W	RPS10B	94	43.564	Saccharomyces_cerevisiae
ENSSLDG00000016257	-	57	44.554	YOR293W	RPS10A	94	44.554	Saccharomyces_cerevisiae
ENSSLDG00000016257	-	61	66.972	ENSSFOG00015012004	-	62	66.972	Scleropages_formosus
ENSSLDG00000016257	-	81	57.237	ENSSFOG00015009603	-	76	57.237	Scleropages_formosus
ENSSLDG00000016257	-	86	84.768	ENSSDUG00000011052	-	87	84.768	Seriola_dumerili
ENSSLDG00000016257	-	68	62.400	ENSSDUG00000010997	-	74	62.400	Seriola_dumerili
ENSSLDG00000016257	-	58	67.647	ENSSPAG00000015615	-	80	67.647	Stegastes_partitus
ENSSLDG00000016257	-	80	60.993	ENSSPAG00000012512	-	70	60.993	Stegastes_partitus
ENSSLDG00000016257	-	56	66.667	ENSSSCG00000033521	-	61	66.667	Sus_scrofa
ENSSLDG00000016257	-	67	56.349	ENSXETG00000032983	-	66	59.524	Xenopus_tropicalis
ENSSLDG00000016257	-	75	59.286	ENSXCOG00000016917	-	86	59.286	Xiphophorus_couchianus
ENSSLDG00000016257	-	66	53.285	ENSXMAG00000029046	-	79	53.285	Xiphophorus_maculatus