EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000016261 (Gene tree)
Gene ID: -
Gene Symbol: p4ha1b
Alias: p4ha1|wu:fc69d06|wu:fi27h11|zgc:56058
Full Name: prolyl 4-hydroxylase subunit alpha 1
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 14520 bases
Position: chrPEQF01099059.1:1414020-1428539
Accession: 111663772
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000020791	2OG-FeII_Oxy	PF03171.20	2.3e-08	1	1
ENSSLDP00000020810	2OG-FeII_Oxy	PF03171.20	2.4e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000021484	-	3600	XM_023418088	ENSSLDP00000020791	548 (aa)	XP_023273856	UPI000C6F6275
ENSSLDT00000021504	-	3600	XM_023418087	ENSSLDP00000020810	548 (aa)	XP_023273855	UPI000C6F8527

Gene Model

Click here to download ENSSLDG00000016261's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000016261's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000016261	p4ha1b	97	63.755	ENSSLDG00000008672	p4ha2	96	64.068

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000016261	p4ha1b	98	74.677	ENSG00000122884	P4HA1	97	75.379	Homo_sapiens
ENSSLDG00000016261	p4ha1b	99	91.026	ENSAPOG00000005170	p4ha1b	97	91.288	Acanthochromis_polyacanthus
ENSSLDG00000016261	p4ha1b	98	74.444	ENSAMEG00000017009	P4HA1	97	75.810	Ailuropoda_melanoleuca
ENSSLDG00000016261	p4ha1b	99	86.314	ENSACIG00000007255	p4ha1b	99	86.807	Amphilophus_citrinellus
ENSSLDG00000016261	p4ha1b	100	90.893	ENSAOCG00000001647	p4ha1b	100	90.893	Amphiprion_ocellaris
ENSSLDG00000016261	p4ha1b	95	65.209	ENSAPEG00000010402	-	96	65.209	Amphiprion_percula
ENSSLDG00000016261	p4ha1b	100	90.893	ENSAPEG00000005243	p4ha1b	100	90.893	Amphiprion_percula
ENSSLDG00000016261	p4ha1b	100	90.693	ENSATEG00000009272	p4ha1b	100	90.693	Anabas_testudineus
ENSSLDG00000016261	p4ha1b	96	76.616	ENSAPLG00000009284	P4HA1	100	75.752	Anas_platyrhynchos
ENSSLDG00000016261	p4ha1b	96	77.273	ENSACAG00000000564	P4HA1	96	76.996	Anolis_carolinensis
ENSSLDG00000016261	p4ha1b	98	75.000	ENSANAG00000024545	P4HA1	96	77.622	Aotus_nancymaae
ENSSLDG00000016261	p4ha1b	100	87.432	ENSACLG00000021556	p4ha1b	100	87.432	Astatotilapia_calliptera
ENSSLDG00000016261	p4ha1b	98	81.413	ENSAMXG00000011123	p4ha1b	97	82.476	Astyanax_mexicanus
ENSSLDG00000016261	p4ha1b	98	75.000	ENSBTAG00000032996	P4HA1	97	76.381	Bos_taurus
ENSSLDG00000016261	p4ha1b	98	75.000	ENSCJAG00000007429	P4HA1	98	78.947	Callithrix_jacchus
ENSSLDG00000016261	p4ha1b	98	74.954	ENSCAFG00000014573	P4HA1	97	76.190	Canis_familiaris
ENSSLDG00000016261	p4ha1b	98	74.067	ENSCAFG00020023993	P4HA1	98	75.340	Canis_lupus_dingo
ENSSLDG00000016261	p4ha1b	98	74.721	ENSCHIG00000013957	P4HA1	97	76.190	Capra_hircus
ENSSLDG00000016261	p4ha1b	98	74.677	ENSTSYG00000004004	P4HA1	100	79.918	Carlito_syrichta
ENSSLDG00000016261	p4ha1b	98	74.115	ENSCPOG00000015701	P4HA1	96	77.622	Cavia_porcellus
ENSSLDG00000016261	p4ha1b	98	74.677	ENSCATG00000029618	P4HA1	96	77.622	Cercocebus_atys
ENSSLDG00000016261	p4ha1b	98	74.122	ENSCLAG00000017260	P4HA1	96	78.322	Chinchilla_lanigera
ENSSLDG00000016261	p4ha1b	98	74.677	ENSCSAG00000008626	P4HA1	97	75.379	Chlorocebus_sabaeus
ENSSLDG00000016261	p4ha1b	99	76.199	ENSCPBG00000007933	P4HA1	96	77.333	Chrysemys_picta_bellii
ENSSLDG00000016261	p4ha1b	98	74.677	ENSCANG00000033147	P4HA1	96	77.622	Colobus_angolensis_palliatus
ENSSLDG00000016261	p4ha1b	98	74.259	ENSCGRG00001007006	P4ha1	96	76.923	Cricetulus_griseus_chok1gshd
ENSSLDG00000016261	p4ha1b	98	74.259	ENSCGRG00000009371	P4ha1	96	76.923	Cricetulus_griseus_crigri
ENSSLDG00000016261	p4ha1b	99	87.293	ENSCSEG00000004939	p4ha1b	97	88.190	Cynoglossus_semilaevis
ENSSLDG00000016261	p4ha1b	100	88.504	ENSCVAG00000016433	p4ha1b	100	88.504	Cyprinodon_variegatus
ENSSLDG00000016261	p4ha1b	95	37.548	ENSDARG00000017038	zgc:152670	93	51.709	Danio_rerio
ENSSLDG00000016261	p4ha1b	96	83.048	ENSDARG00000071082	p4ha1b	97	82.857	Danio_rerio
ENSSLDG00000016261	p4ha1b	97	73.929	ENSDNOG00000013665	P4HA1	91	74.952	Dasypus_novemcinctus
ENSSLDG00000016261	p4ha1b	98	74.908	ENSDORG00000003405	P4ha1	96	78.322	Dipodomys_ordii
ENSSLDG00000016261	p4ha1b	97	60.150	ENSEBUG00000005379	p4ha1b	95	61.583	Eptatretus_burgeri
ENSSLDG00000016261	p4ha1b	95	74.521	ENSEASG00005016606	P4HA1	96	77.622	Equus_asinus_asinus
ENSSLDG00000016261	p4ha1b	98	74.164	ENSECAG00000012496	P4HA1	100	74.383	Equus_caballus
ENSSLDG00000016261	p4ha1b	84	72.549	ENSEEUG00000005542	P4HA1	82	78.261	Erinaceus_europaeus
ENSSLDG00000016261	p4ha1b	98	81.181	ENSELUG00000005913	p4ha1b	99	81.467	Esox_lucius
ENSSLDG00000016261	p4ha1b	98	74.815	ENSFCAG00000018673	P4HA1	97	76.190	Felis_catus
ENSSLDG00000016261	p4ha1b	98	75.741	ENSFALG00000012773	P4HA1	96	76.190	Ficedula_albicollis
ENSSLDG00000016261	p4ha1b	98	67.532	ENSFDAG00000007094	P4HA1	97	68.762	Fukomys_damarensis
ENSSLDG00000016261	p4ha1b	100	89.130	ENSFHEG00000022856	p4ha1b	100	89.130	Fundulus_heteroclitus
ENSSLDG00000016261	p4ha1b	94	80.769	ENSGMOG00000018948	p4ha1b	100	80.769	Gadus_morhua
ENSSLDG00000016261	p4ha1b	98	75.696	ENSGALG00000004325	P4HA1	97	76.083	Gallus_gallus
ENSSLDG00000016261	p4ha1b	100	89.416	ENSGAFG00000019818	p4ha1b	100	89.416	Gambusia_affinis
ENSSLDG00000016261	p4ha1b	96	88.615	ENSGACG00000010233	p4ha1b	97	88.615	Gasterosteus_aculeatus
ENSSLDG00000016261	p4ha1b	98	74.677	ENSGGOG00000015551	P4HA1	96	77.622	Gorilla_gorilla
ENSSLDG00000016261	p4ha1b	100	87.432	ENSHBUG00000015524	p4ha1b	100	87.432	Haplochromis_burtoni
ENSSLDG00000016261	p4ha1b	98	74.259	ENSHGLG00000011764	P4HA1	96	77.622	Heterocephalus_glaber_female
ENSSLDG00000016261	p4ha1b	94	86.822	ENSHCOG00000017152	p4ha1b	100	86.822	Hippocampus_comes
ENSSLDG00000016261	p4ha1b	96	79.810	ENSIPUG00000015157	P4HA1	97	79.810	Ictalurus_punctatus
ENSSLDG00000016261	p4ha1b	98	74.583	ENSSTOG00000027062	P4HA1	96	76.923	Ictidomys_tridecemlineatus
ENSSLDG00000016261	p4ha1b	98	74.535	ENSJJAG00000004232	P4ha1	96	78.322	Jaculus_jaculus
ENSSLDG00000016261	p4ha1b	96	91.098	ENSKMAG00000001588	p4ha1b	97	91.667	Kryptolebias_marmoratus
ENSSLDG00000016261	p4ha1b	100	89.964	ENSLBEG00000018911	p4ha1b	100	89.964	Labrus_bergylta
ENSSLDG00000016261	p4ha1b	96	76.471	ENSLACG00000010202	P4HA1	97	76.471	Latimeria_chalumnae
ENSSLDG00000016261	p4ha1b	99	78.871	ENSLOCG00000008546	p4ha1b	95	80.381	Lepisosteus_oculatus
ENSSLDG00000016261	p4ha1b	98	74.954	ENSLAFG00000002652	P4HA1	97	76.000	Loxodonta_africana
ENSSLDG00000016261	p4ha1b	98	74.677	ENSMFAG00000030507	P4HA1	96	77.622	Macaca_fascicularis
ENSSLDG00000016261	p4ha1b	98	71.534	ENSMMUG00000011274	P4HA1	96	77.622	Macaca_mulatta
ENSSLDG00000016261	p4ha1b	98	73.048	ENSMNEG00000011433	P4HA1	95	75.248	Macaca_nemestrina
ENSSLDG00000016261	p4ha1b	94	70.986	ENSMLEG00000043338	P4HA1	100	82.377	Mandrillus_leucophaeus
ENSSLDG00000016261	p4ha1b	99	90.608	ENSMAMG00000015854	p4ha1b	98	90.095	Mastacembelus_armatus
ENSSLDG00000016261	p4ha1b	100	87.250	ENSMZEG00005027421	p4ha1b	100	87.250	Maylandia_zebra
ENSSLDG00000016261	p4ha1b	98	75.046	ENSMGAG00000005554	P4HA1	100	76.038	Meleagris_gallopavo
ENSSLDG00000016261	p4ha1b	98	60.370	ENSMAUG00000011056	P4ha1	93	66.774	Mesocricetus_auratus
ENSSLDG00000016261	p4ha1b	100	74.182	ENSMICG00000031365	P4HA1	96	77.622	Microcebus_murinus
ENSSLDG00000016261	p4ha1b	98	74.074	ENSMOCG00000017531	P4ha1	96	76.224	Microtus_ochrogaster
ENSSLDG00000016261	p4ha1b	96	88.571	ENSMMOG00000008022	p4ha1b	97	88.571	Mola_mola
ENSSLDG00000016261	p4ha1b	98	76.766	ENSMODG00000000121	P4HA1	96	77.905	Monodelphis_domestica
ENSSLDG00000016261	p4ha1b	100	92.153	ENSMALG00000019674	p4ha1b	100	92.153	Monopterus_albus
ENSSLDG00000016261	p4ha1b	98	73.937	MGP_CAROLIEiJ_G0015342	P4ha1	96	76.224	Mus_caroli
ENSSLDG00000016261	p4ha1b	98	74.122	ENSMUSG00000019916	P4ha1	96	76.224	Mus_musculus
ENSSLDG00000016261	p4ha1b	98	74.307	MGP_PahariEiJ_G0030758	P4ha1	96	76.923	Mus_pahari
ENSSLDG00000016261	p4ha1b	98	74.122	MGP_SPRETEiJ_G0016153	P4ha1	96	76.224	Mus_spretus
ENSSLDG00000016261	p4ha1b	98	74.954	ENSMPUG00000003940	P4HA1	97	76.000	Mustela_putorius_furo
ENSSLDG00000016261	p4ha1b	98	74.164	ENSMLUG00000006548	P4HA1	97	75.619	Myotis_lucifugus
ENSSLDG00000016261	p4ha1b	98	74.815	ENSNGAG00000014487	P4ha1	96	76.923	Nannospalax_galili
ENSSLDG00000016261	p4ha1b	96	86.528	ENSNBRG00000014791	p4ha1b	100	86.472	Neolamprologus_brichardi
ENSSLDG00000016261	p4ha1b	98	65.434	ENSNLEG00000035416	P4HA1	99	79.668	Nomascus_leucogenys
ENSSLDG00000016261	p4ha1b	90	68.699	ENSMEUG00000010326	P4HA1	95	68.699	Notamacropus_eugenii
ENSSLDG00000016261	p4ha1b	98	65.926	ENSOPRG00000000990	P4HA1	97	66.476	Ochotona_princeps
ENSSLDG00000016261	p4ha1b	85	73.941	ENSODEG00000015164	P4HA1	96	78.322	Octodon_degus
ENSSLDG00000016261	p4ha1b	100	87.840	ENSONIG00000000737	p4ha1b	90	88.203	Oreochromis_niloticus
ENSSLDG00000016261	p4ha1b	79	75.576	ENSOANG00000001125	-	100	75.751	Ornithorhynchus_anatinus
ENSSLDG00000016261	p4ha1b	98	74.444	ENSOCUG00000009739	P4HA1	97	74.763	Oryctolagus_cuniculus
ENSSLDG00000016261	p4ha1b	96	86.528	ENSORLG00000005147	p4ha1b	100	86.628	Oryzias_latipes
ENSSLDG00000016261	p4ha1b	96	86.528	ENSORLG00020010911	p4ha1b	96	86.528	Oryzias_latipes_hni
ENSSLDG00000016261	p4ha1b	89	85.421	ENSORLG00015016175	p4ha1b	98	83.984	Oryzias_latipes_hsok
ENSSLDG00000016261	p4ha1b	96	86.717	ENSOMEG00000009962	p4ha1b	97	87.121	Oryzias_melastigma
ENSSLDG00000016261	p4ha1b	98	74.401	ENSOGAG00000003483	P4HA1	97	75.332	Otolemur_garnettii
ENSSLDG00000016261	p4ha1b	98	74.721	ENSOARG00000007348	P4HA1	97	76.190	Ovis_aries
ENSSLDG00000016261	p4ha1b	98	69.118	ENSPPAG00000030135	P4HA1	100	82.377	Pan_paniscus
ENSSLDG00000016261	p4ha1b	98	74.815	ENSPPRG00000002655	P4HA1	97	76.190	Panthera_pardus
ENSSLDG00000016261	p4ha1b	98	74.815	ENSPTIG00000007711	P4HA1	97	76.190	Panthera_tigris_altaica
ENSSLDG00000016261	p4ha1b	98	69.871	ENSPTRG00000002619	P4HA1	96	77.622	Pan_troglodytes
ENSSLDG00000016261	p4ha1b	98	74.677	ENSPANG00000022355	P4HA1	96	77.622	Papio_anubis
ENSSLDG00000016261	p4ha1b	99	79.667	ENSPKIG00000000438	p4ha1b	96	80.571	Paramormyrops_kingsleyae
ENSSLDG00000016261	p4ha1b	99	76.384	ENSPSIG00000016298	P4HA1	97	76.571	Pelodiscus_sinensis
ENSSLDG00000016261	p4ha1b	98	81.701	ENSPMGG00000007593	p4ha1b	96	83.525	Periophthalmus_magnuspinnatus
ENSSLDG00000016261	p4ha1b	98	73.889	ENSPEMG00000006561	P4ha1	96	76.923	Peromyscus_maniculatus_bairdii
ENSSLDG00000016261	p4ha1b	98	76.022	ENSPCIG00000018768	P4HA1	97	77.143	Phascolarctos_cinereus
ENSSLDG00000016261	p4ha1b	100	89.416	ENSPFOG00000018574	p4ha1b	100	89.416	Poecilia_formosa
ENSSLDG00000016261	p4ha1b	100	90.146	ENSPLAG00000012628	p4ha1b	100	92.547	Poecilia_latipinna
ENSSLDG00000016261	p4ha1b	100	89.964	ENSPMEG00000024082	p4ha1b	100	89.964	Poecilia_mexicana
ENSSLDG00000016261	p4ha1b	100	90.328	ENSPREG00000010003	p4ha1b	100	90.328	Poecilia_reticulata
ENSSLDG00000016261	p4ha1b	98	74.677	ENSPPYG00000002348	P4HA1	97	75.379	Pongo_abelii
ENSSLDG00000016261	p4ha1b	94	67.829	ENSPCOG00000017553	P4HA1	100	82.787	Propithecus_coquereli
ENSSLDG00000016261	p4ha1b	98	67.844	ENSPVAG00000012989	P4HA1	97	68.381	Pteropus_vampyrus
ENSSLDG00000016261	p4ha1b	100	87.614	ENSPNYG00000002443	p4ha1b	100	87.614	Pundamilia_nyererei
ENSSLDG00000016261	p4ha1b	99	80.961	ENSPNAG00000023149	p4ha1b	97	82.890	Pygocentrus_nattereri
ENSSLDG00000016261	p4ha1b	98	74.444	ENSRNOG00000050655	P4ha1	97	74.811	Rattus_norvegicus
ENSSLDG00000016261	p4ha1b	98	66.174	ENSRBIG00000035304	P4HA1	97	66.667	Rhinopithecus_bieti
ENSSLDG00000016261	p4ha1b	98	74.815	ENSRROG00000044078	P4HA1	96	77.622	Rhinopithecus_roxellana
ENSSLDG00000016261	p4ha1b	71	72.821	ENSSHAG00000008056	P4HA1	100	73.333	Sarcophilus_harrisii
ENSSLDG00000016261	p4ha1b	98	77.365	ENSSFOG00015009176	p4ha1b	100	78.210	Scleropages_formosus
ENSSLDG00000016261	p4ha1b	99	91.160	ENSSMAG00000019199	p4ha1b	97	91.619	Scophthalmus_maximus
ENSSLDG00000016261	p4ha1b	100	99.453	ENSSDUG00000016587	p4ha1b	100	99.453	Seriola_dumerili
ENSSLDG00000016261	p4ha1b	98	71.429	ENSSARG00000003275	P4HA1	97	72.381	Sorex_araneus
ENSSLDG00000016261	p4ha1b	98	75.601	ENSSPUG00000002624	P4HA1	96	75.425	Sphenodon_punctatus
ENSSLDG00000016261	p4ha1b	85	88.186	ENSSPAG00000011193	p4ha1b	100	88.273	Stegastes_partitus
ENSSLDG00000016261	p4ha1b	98	74.768	ENSSSCG00000010292	P4HA1	97	75.810	Sus_scrofa
ENSSLDG00000016261	p4ha1b	98	75.741	ENSTGUG00000004364	-	97	76.190	Taeniopygia_guttata
ENSSLDG00000016261	p4ha1b	98	88.419	ENSTRUG00000004081	p4ha1b	97	88.868	Takifugu_rubripes
ENSSLDG00000016261	p4ha1b	99	86.213	ENSTNIG00000017021	p4ha1b	97	87.810	Tetraodon_nigroviridis
ENSSLDG00000016261	p4ha1b	98	74.444	ENSTTRG00000009782	P4HA1	96	75.432	Tursiops_truncatus
ENSSLDG00000016261	p4ha1b	98	74.954	ENSUMAG00000009024	P4HA1	97	76.000	Ursus_maritimus
ENSSLDG00000016261	p4ha1b	98	67.347	ENSVPAG00000007253	P4HA1	97	67.619	Vicugna_pacos
ENSSLDG00000016261	p4ha1b	98	74.954	ENSVVUG00000022660	P4HA1	97	76.190	Vulpes_vulpes
ENSSLDG00000016261	p4ha1b	100	69.928	ENSXETG00000006154	p4ha1	96	71.645	Xenopus_tropicalis
ENSSLDG00000016261	p4ha1b	99	88.182	ENSXCOG00000010262	p4ha1b	99	88.182	Xiphophorus_couchianus
ENSSLDG00000016261	p4ha1b	100	89.051	ENSXMAG00000003889	p4ha1b	100	89.051	Xiphophorus_maculatus