EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000016285 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 3426 bases
Position: chrPEQF01099159.1:2072247-2075672
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000020831	RRM_1	PF00076.22	2.9e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000021526	-	306	-	ENSSLDP00000020831	101 (aa)	-	-

Gene Model

Click here to download ENSSLDG00000016285's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000016285's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000016285	-	81	69.512	ENSSLDG00000012105	-	75	69.136
ENSSLDG00000016285	-	85	65.116	ENSSLDG00000015477	-	88	65.116

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000016285	-	82	89.157	ENSG00000153914	SREK1	87	85.057	Homo_sapiens
ENSSLDG00000016285	-	81	71.951	ENSG00000116754	SRSF11	64	71.951	Homo_sapiens
ENSSLDG00000016285	-	81	69.512	ENSAPOG00000004488	-	75	69.136	Acanthochromis_polyacanthus
ENSSLDG00000016285	-	81	67.073	ENSAPOG00000007244	-	59	67.073	Acanthochromis_polyacanthus
ENSSLDG00000016285	-	88	97.753	ENSACIG00000015055	-	71	97.753	Amphilophus_citrinellus
ENSSLDG00000016285	-	83	65.476	ENSACIG00000012348	-	88	65.476	Amphilophus_citrinellus
ENSSLDG00000016285	-	81	69.512	ENSACIG00000018075	-	75	69.136	Amphilophus_citrinellus
ENSSLDG00000016285	-	97	96.939	ENSAOCG00000024368	-	99	96.939	Amphiprion_ocellaris
ENSSLDG00000016285	-	79	70.000	ENSAOCG00000000739	-	85	70.000	Amphiprion_ocellaris
ENSSLDG00000016285	-	89	94.444	ENSAPEG00000002218	-	98	94.444	Amphiprion_percula
ENSSLDG00000016285	-	81	69.512	ENSAPEG00000003619	SRSF11	75	69.136	Amphiprion_percula
ENSSLDG00000016285	-	81	68.293	ENSAPEG00000003142	SRSF11	90	63.218	Amphiprion_percula
ENSSLDG00000016285	-	82	67.470	ENSATEG00000011691	srsf11	75	67.901	Anabas_testudineus
ENSSLDG00000016285	-	81	69.512	ENSATEG00000007534	-	75	69.136	Anabas_testudineus
ENSSLDG00000016285	-	83	98.810	ENSATEG00000009464	-	92	98.810	Anabas_testudineus
ENSSLDG00000016285	-	82	89.157	ENSANAG00000031358	SREK1	87	85.057	Aotus_nancymaae
ENSSLDG00000016285	-	85	65.116	ENSACLG00000000623	srsf11	88	65.116	Astatotilapia_calliptera
ENSSLDG00000016285	-	82	90.361	ENSBTAG00000007321	SREK1	87	86.207	Bos_taurus
ENSSLDG00000016285	-	86	86.207	ENSCJAG00000015950	SREK1	87	85.057	Callithrix_jacchus
ENSSLDG00000016285	-	80	91.358	ENSCAFG00020019449	-	87	86.207	Canis_lupus_dingo
ENSSLDG00000016285	-	80	71.605	ENSCAFG00020017255	-	73	71.951	Canis_lupus_dingo
ENSSLDG00000016285	-	82	89.157	ENSCHIG00000025052	-	87	86.207	Capra_hircus
ENSSLDG00000016285	-	81	71.951	ENSCHIG00000025295	SRSF11	69	71.951	Capra_hircus
ENSSLDG00000016285	-	81	69.512	ENSTSYG00000033270	-	58	69.880	Carlito_syrichta
ENSSLDG00000016285	-	82	90.361	ENSTSYG00000036957	SREK1	87	86.207	Carlito_syrichta
ENSSLDG00000016285	-	82	89.157	ENSCCAG00000020591	SREK1	87	85.057	Cebus_capucinus
ENSSLDG00000016285	-	81	90.244	ENSCATG00000031482	SREK1	87	85.057	Cercocebus_atys
ENSSLDG00000016285	-	83	88.095	ENSCPBG00000026866	SREK1	62	90.123	Chrysemys_picta_bellii
ENSSLDG00000016285	-	82	67.470	ENSCPBG00000022430	-	76	65.116	Chrysemys_picta_bellii
ENSSLDG00000016285	-	81	90.244	ENSCANG00000030421	SREK1	87	85.057	Colobus_angolensis_palliatus
ENSSLDG00000016285	-	88	92.135	ENSCSEG00000013934	-	91	90.000	Cynoglossus_semilaevis
ENSSLDG00000016285	-	86	96.552	ENSCVAG00000002404	-	71	96.552	Cyprinodon_variegatus
ENSSLDG00000016285	-	83	64.286	ENSDARG00000098574	srsf11	92	64.286	Danio_rerio
ENSSLDG00000016285	-	80	91.358	ENSDORG00000023160	-	64	88.235	Dipodomys_ordii
ENSSLDG00000016285	-	81	71.951	ENSEASG00005007847	SRSF11	72	71.951	Equus_asinus_asinus
ENSSLDG00000016285	-	89	83.333	ENSEASG00005006832	-	82	80.851	Equus_asinus_asinus
ENSSLDG00000016285	-	80	91.358	ENSECAG00000035731	-	76	86.207	Equus_caballus
ENSSLDG00000016285	-	82	86.747	ENSFCAG00000036884	-	87	83.908	Felis_catus
ENSSLDG00000016285	-	80	71.605	ENSFCAG00000034448	-	65	71.951	Felis_catus
ENSSLDG00000016285	-	84	90.588	ENSFHEG00000020959	-	66	90.588	Fundulus_heteroclitus
ENSSLDG00000016285	-	82	90.361	ENSGALG00000043541	SREK1	84	89.157	Gallus_gallus
ENSSLDG00000016285	-	89	94.565	ENSGAFG00000001732	-	75	94.565	Gambusia_affinis
ENSSLDG00000016285	-	82	89.157	ENSGAGG00000006087	SREK1	62	90.123	Gopherus_agassizii
ENSSLDG00000016285	-	81	73.171	ENSGAGG00000022411	-	80	73.171	Gopherus_agassizii
ENSSLDG00000016285	-	81	90.244	ENSGGOG00000004737	SREK1	87	85.057	Gorilla_gorilla
ENSSLDG00000016285	-	87	95.455	ENSHBUG00000007082	-	66	95.455	Haplochromis_burtoni
ENSSLDG00000016285	-	82	91.566	ENSHCOG00000017228	-	81	91.954	Hippocampus_comes
ENSSLDG00000016285	-	84	65.882	ENSHCOG00000016860	-	87	65.882	Hippocampus_comes
ENSSLDG00000016285	-	82	90.361	ENSSTOG00000008850	SREK1	87	86.207	Ictidomys_tridecemlineatus
ENSSLDG00000016285	-	80	90.123	ENSJJAG00000008846	-	66	87.059	Jaculus_jaculus
ENSSLDG00000016285	-	85	65.116	ENSLBEG00000024167	srsf11	88	65.116	Labrus_bergylta
ENSSLDG00000016285	-	92	92.473	ENSLBEG00000022954	-	67	92.473	Labrus_bergylta
ENSSLDG00000016285	-	81	90.244	ENSMFAG00000039823	SREK1	87	85.057	Macaca_fascicularis
ENSSLDG00000016285	-	81	90.244	ENSMMUG00000014586	SREK1	79	87.209	Macaca_mulatta
ENSSLDG00000016285	-	81	90.244	ENSMNEG00000030723	SREK1	87	85.057	Macaca_nemestrina
ENSSLDG00000016285	-	82	89.157	ENSMLEG00000039078	SREK1	87	85.057	Mandrillus_leucophaeus
ENSSLDG00000016285	-	88	98.876	ENSMAMG00000003099	-	86	98.876	Mastacembelus_armatus
ENSSLDG00000016285	-	81	69.512	ENSMAMG00000015002	-	80	65.116	Mastacembelus_armatus
ENSSLDG00000016285	-	75	98.684	ENSMZEG00005005707	-	59	98.684	Maylandia_zebra
ENSSLDG00000016285	-	82	90.361	ENSMICG00000034959	SREK1	87	86.207	Microcebus_murinus
ENSSLDG00000016285	-	88	65.169	ENSMMOG00000016751	-	83	65.169	Mola_mola
ENSSLDG00000016285	-	82	66.265	ENSMMOG00000008877	-	82	66.265	Mola_mola
ENSSLDG00000016285	-	87	94.318	ENSMALG00000017086	srek1	100	92.135	Monopterus_albus
ENSSLDG00000016285	-	80	69.136	ENSMALG00000016608	srsf11	83	69.136	Monopterus_albus
ENSSLDG00000016285	-	81	71.951	MGP_CAROLIEiJ_G0025767	Srsf11	82	71.951	Mus_caroli
ENSSLDG00000016285	-	81	71.951	ENSMUSG00000055436	Srsf11	81	71.951	Mus_musculus
ENSSLDG00000016285	-	81	71.951	MGP_PahariEiJ_G0027217	Srsf11	82	71.951	Mus_pahari
ENSSLDG00000016285	-	81	71.951	MGP_SPRETEiJ_G0026719	Srsf11	82	71.951	Mus_spretus
ENSSLDG00000016285	-	80	91.358	ENSNGAG00000014631	-	64	88.235	Nannospalax_galili
ENSSLDG00000016285	-	83	65.476	ENSNBRG00000020213	-	88	65.476	Neolamprologus_brichardi
ENSSLDG00000016285	-	87	95.455	ENSNBRG00000010656	-	66	95.455	Neolamprologus_brichardi
ENSSLDG00000016285	-	81	90.244	ENSNLEG00000003827	SREK1	87	85.057	Nomascus_leucogenys
ENSSLDG00000016285	-	80	90.123	ENSODEG00000016218	-	83	87.059	Octodon_degus
ENSSLDG00000016285	-	77	93.590	ENSORLG00000002711	-	65	93.590	Oryzias_latipes
ENSSLDG00000016285	-	80	69.136	ENSORLG00000030366	-	72	69.136	Oryzias_latipes
ENSSLDG00000016285	-	81	69.512	ENSORLG00020009393	-	72	69.136	Oryzias_latipes_hni
ENSSLDG00000016285	-	83	94.048	ENSORLG00020012815	-	67	93.258	Oryzias_latipes_hni
ENSSLDG00000016285	-	81	69.512	ENSORLG00015009374	-	72	69.136	Oryzias_latipes_hsok
ENSSLDG00000016285	-	84	94.118	ENSORLG00015020455	-	67	94.118	Oryzias_latipes_hsok
ENSSLDG00000016285	-	81	90.244	ENSPPAG00000031605	SREK1	79	87.209	Pan_paniscus
ENSSLDG00000016285	-	82	87.952	ENSPPRG00000024617	SREK1	87	83.908	Panthera_pardus
ENSSLDG00000016285	-	82	87.952	ENSPTIG00000006608	SREK1	87	83.908	Panthera_tigris_altaica
ENSSLDG00000016285	-	81	90.244	ENSPTRG00000016936	SREK1	87	85.057	Pan_troglodytes
ENSSLDG00000016285	-	81	90.244	ENSPANG00000008953	SREK1	87	85.057	Papio_anubis
ENSSLDG00000016285	-	83	64.286	ENSPKIG00000021576	-	88	64.286	Paramormyrops_kingsleyae
ENSSLDG00000016285	-	88	89.888	ENSPMGG00000017029	-	77	89.888	Periophthalmus_magnuspinnatus
ENSSLDG00000016285	-	81	68.293	ENSPMGG00000005045	-	72	68.293	Periophthalmus_magnuspinnatus
ENSSLDG00000016285	-	82	67.470	ENSPMGG00000000954	-	78	67.470	Periophthalmus_magnuspinnatus
ENSSLDG00000016285	-	84	96.471	ENSPLAG00000014609	-	63	96.471	Poecilia_latipinna
ENSSLDG00000016285	-	81	69.512	ENSPLAG00000009484	-	56	69.136	Poecilia_latipinna
ENSSLDG00000016285	-	84	96.471	ENSPLAG00000008818	-	63	96.471	Poecilia_latipinna
ENSSLDG00000016285	-	81	69.512	ENSPMEG00000023453	-	56	69.136	Poecilia_mexicana
ENSSLDG00000016285	-	84	96.471	ENSPMEG00000006824	-	63	96.471	Poecilia_mexicana
ENSSLDG00000016285	-	81	67.073	ENSPMEG00000018837	srsf11	67	67.073	Poecilia_mexicana
ENSSLDG00000016285	-	84	96.471	ENSPMEG00000006607	-	63	96.471	Poecilia_mexicana
ENSSLDG00000016285	-	86	97.701	ENSPREG00000019922	-	70	97.701	Poecilia_reticulata
ENSSLDG00000016285	-	81	91.463	ENSPCOG00000026230	SREK1	87	86.207	Propithecus_coquereli
ENSSLDG00000016285	-	87	95.455	ENSPNYG00000007178	-	66	95.455	Pundamilia_nyererei
ENSSLDG00000016285	-	81	90.244	ENSRBIG00000033818	SREK1	87	85.057	Rhinopithecus_bieti
ENSSLDG00000016285	-	81	71.951	ENSRBIG00000042971	SRSF11	63	71.951	Rhinopithecus_bieti
ENSSLDG00000016285	-	81	90.244	ENSRROG00000017210	SREK1	87	85.057	Rhinopithecus_roxellana
ENSSLDG00000016285	-	81	71.951	ENSSBOG00000033461	SRSF11	63	71.951	Saimiri_boliviensis_boliviensis
ENSSLDG00000016285	-	81	90.244	ENSSBOG00000031230	SREK1	87	85.057	Saimiri_boliviensis_boliviensis
ENSSLDG00000016285	-	80	66.667	ENSSFOG00015016086	-	74	66.667	Scleropages_formosus
ENSSLDG00000016285	-	100	100.000	ENSSDUG00000010395	-	100	100.000	Seriola_dumerili
ENSSLDG00000016285	-	94	96.842	ENSSPAG00000022310	-	96	96.842	Stegastes_partitus
ENSSLDG00000016285	-	81	69.512	ENSSPAG00000016483	-	66	69.512	Stegastes_partitus
ENSSLDG00000016285	-	88	94.382	ENSTRUG00000022058	-	72	94.382	Takifugu_rubripes
ENSSLDG00000016285	-	80	71.605	ENSUAMG00000008403	-	63	71.951	Ursus_americanus
ENSSLDG00000016285	-	81	91.463	ENSUAMG00000022662	-	79	88.372	Ursus_americanus
ENSSLDG00000016285	-	80	91.358	ENSVVUG00000005888	-	87	86.207	Vulpes_vulpes
ENSSLDG00000016285	-	84	67.059	ENSXCOG00000003220	-	73	67.059	Xiphophorus_couchianus
ENSSLDG00000016285	-	92	91.579	ENSXCOG00000017792	-	74	91.579	Xiphophorus_couchianus
ENSSLDG00000016285	-	81	69.512	ENSXCOG00000015127	-	88	69.512	Xiphophorus_couchianus
ENSSLDG00000016285	-	81	69.512	ENSXMAG00000019180	SRSF11	54	69.136	Xiphophorus_maculatus
ENSSLDG00000016285	-	87	96.591	ENSXMAG00000028210	-	72	96.591	Xiphophorus_maculatus