EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSLDG00000016303 (Gene tree)
Gene ID: -
Gene Symbol: tsen54
Alias: zgc:109927
Full Name: tRNA splicing endonuclease subunit 54
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 5872 bases
Position: chrPEQF01098998.1:2400987-2406858
Accession: 111660463
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000020851	tRNA_int_end_N2	PF12928.7	3.8e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000021545	-	1685	XM_023413756	ENSSLDP00000020851	519 (aa)	XP_023269524	UPI000C6F786D

Gene Model

Click here to download ENSSLDG00000016303's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000016303's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000016303	tsen54	97	45.736	ENSG00000182173	TSEN54	100	63.889	Homo_sapiens
ENSSLDG00000016303	tsen54	100	81.696	ENSAPOG00000009659	tsen54	98	81.696	Acanthochromis_polyacanthus
ENSSLDG00000016303	tsen54	96	44.701	ENSAMEG00000009414	TSEN54	96	45.489	Ailuropoda_melanoleuca
ENSSLDG00000016303	tsen54	100	81.310	ENSAOCG00000000152	tsen54	98	81.310	Amphiprion_ocellaris
ENSSLDG00000016303	tsen54	100	81.118	ENSAPEG00000018931	tsen54	98	81.118	Amphiprion_percula
ENSSLDG00000016303	tsen54	100	80.038	ENSATEG00000019860	tsen54	100	80.414	Anabas_testudineus
ENSSLDG00000016303	tsen54	86	45.591	ENSAPLG00000009419	TSEN54	99	45.591	Anas_platyrhynchos
ENSSLDG00000016303	tsen54	97	46.272	ENSACAG00000006714	TSEN54	98	47.137	Anolis_carolinensis
ENSSLDG00000016303	tsen54	97	45.543	ENSANAG00000024061	TSEN54	96	45.736	Aotus_nancymaae
ENSSLDG00000016303	tsen54	100	77.040	ENSACLG00000019800	tsen54	100	76.281	Astatotilapia_calliptera
ENSSLDG00000016303	tsen54	97	58.398	ENSAMXG00000006546	tsen54	97	58.398	Astyanax_mexicanus
ENSSLDG00000016303	tsen54	97	44.000	ENSBTAG00000000824	TSEN54	97	45.174	Bos_taurus
ENSSLDG00000016303	tsen54	97	44.961	ENSCJAG00000014278	TSEN54	96	45.349	Callithrix_jacchus
ENSSLDG00000016303	tsen54	97	44.828	ENSCAFG00000004798	TSEN54	97	45.385	Canis_familiaris
ENSSLDG00000016303	tsen54	97	44.828	ENSCAFG00020000312	TSEN54	97	45.385	Canis_lupus_dingo
ENSSLDG00000016303	tsen54	97	43.992	ENSCHIG00000019908	TSEN54	97	45.174	Capra_hircus
ENSSLDG00000016303	tsen54	86	43.913	ENSTSYG00000037439	TSEN54	99	45.000	Carlito_syrichta
ENSSLDG00000016303	tsen54	97	45.543	ENSCCAG00000036624	TSEN54	96	45.543	Cebus_capucinus
ENSSLDG00000016303	tsen54	97	45.736	ENSCATG00000042877	TSEN54	96	44.847	Cercocebus_atys
ENSSLDG00000016303	tsen54	97	46.484	ENSCLAG00000002924	TSEN54	96	46.484	Chinchilla_lanigera
ENSSLDG00000016303	tsen54	97	45.543	ENSCSAG00000004809	TSEN54	97	45.038	Chlorocebus_sabaeus
ENSSLDG00000016303	tsen54	97	47.977	ENSCPBG00000028071	TSEN54	98	47.977	Chrysemys_picta_bellii
ENSSLDG00000016303	tsen54	97	46.538	ENSCANG00000028053	TSEN54	97	45.038	Colobus_angolensis_palliatus
ENSSLDG00000016303	tsen54	97	45.192	ENSCGRG00001020029	Tsen54	97	45.192	Cricetulus_griseus_chok1gshd
ENSSLDG00000016303	tsen54	84	43.488	ENSCGRG00000016289	Tsen54	99	43.488	Cricetulus_griseus_crigri
ENSSLDG00000016303	tsen54	81	62.470	ENSCSEG00000020586	tsen54	99	62.470	Cynoglossus_semilaevis
ENSSLDG00000016303	tsen54	81	59.059	ENSDARG00000036844	tsen54	100	59.294	Danio_rerio
ENSSLDG00000016303	tsen54	97	44.256	ENSDNOG00000018452	TSEN54	97	45.681	Dasypus_novemcinctus
ENSSLDG00000016303	tsen54	97	46.796	ENSDORG00000004073	Tsen54	97	46.731	Dipodomys_ordii
ENSSLDG00000016303	tsen54	76	43.125	ENSEBUG00000005203	TSEN54	73	43.125	Eptatretus_burgeri
ENSSLDG00000016303	tsen54	97	45.437	ENSEASG00005000579	TSEN54	97	45.437	Equus_asinus_asinus
ENSSLDG00000016303	tsen54	97	45.817	ENSECAG00000004924	TSEN54	97	45.817	Equus_caballus
ENSSLDG00000016303	tsen54	86	41.915	ENSEEUG00000008467	TSEN54	99	42.857	Erinaceus_europaeus
ENSSLDG00000016303	tsen54	99	63.536	ENSELUG00000017703	tsen54	92	64.088	Esox_lucius
ENSSLDG00000016303	tsen54	97	45.211	ENSFCAG00000023712	TSEN54	97	45.507	Felis_catus
ENSSLDG00000016303	tsen54	93	46.869	ENSFALG00000001119	TSEN54	92	47.071	Ficedula_albicollis
ENSSLDG00000016303	tsen54	86	45.077	ENSFDAG00000019090	TSEN54	99	45.077	Fukomys_damarensis
ENSSLDG00000016303	tsen54	100	73.231	ENSFHEG00000005470	tsen54	100	73.231	Fundulus_heteroclitus
ENSSLDG00000016303	tsen54	82	58.333	ENSGMOG00000013146	tsen54	99	58.333	Gadus_morhua
ENSSLDG00000016303	tsen54	93	44.890	ENSGALG00000047163	TSEN54	96	44.890	Gallus_gallus
ENSSLDG00000016303	tsen54	100	70.769	ENSGAFG00000005111	tsen54	100	70.769	Gambusia_affinis
ENSSLDG00000016303	tsen54	97	68.775	ENSGACG00000014987	tsen54	100	68.775	Gasterosteus_aculeatus
ENSSLDG00000016303	tsen54	97	48.062	ENSGAGG00000006825	TSEN54	96	48.062	Gopherus_agassizii
ENSSLDG00000016303	tsen54	96	45.720	ENSGGOG00000009417	TSEN54	99	45.211	Gorilla_gorilla
ENSSLDG00000016303	tsen54	90	75.472	ENSHBUG00000018296	tsen54	92	74.633	Haplochromis_burtoni
ENSSLDG00000016303	tsen54	97	45.677	ENSHGLG00000007979	TSEN54	97	45.677	Heterocephalus_glaber_female
ENSSLDG00000016303	tsen54	97	44.737	ENSHGLG00100005497	TSEN54	97	44.737	Heterocephalus_glaber_male
ENSSLDG00000016303	tsen54	81	65.476	ENSHCOG00000007481	tsen54	100	65.476	Hippocampus_comes
ENSSLDG00000016303	tsen54	97	53.113	ENSIPUG00000000590	tsen54	97	52.724	Ictalurus_punctatus
ENSSLDG00000016303	tsen54	97	45.703	ENSSTOG00000012883	TSEN54	97	45.508	Ictidomys_tridecemlineatus
ENSSLDG00000016303	tsen54	97	46.821	ENSJJAG00000007365	Tsen54	97	46.821	Jaculus_jaculus
ENSSLDG00000016303	tsen54	100	71.800	ENSKMAG00000006944	tsen54	100	71.429	Kryptolebias_marmoratus
ENSSLDG00000016303	tsen54	100	72.381	ENSLBEG00000004199	tsen54	100	72.381	Labrus_bergylta
ENSSLDG00000016303	tsen54	97	43.511	ENSLACG00000009497	TSEN54	99	43.511	Latimeria_chalumnae
ENSSLDG00000016303	tsen54	99	55.037	ENSLOCG00000011191	tsen54	99	55.410	Lepisosteus_oculatus
ENSSLDG00000016303	tsen54	92	43.265	ENSLAFG00000011655	TSEN54	92	45.102	Loxodonta_africana
ENSSLDG00000016303	tsen54	97	45.543	ENSMFAG00000000712	TSEN54	97	45.038	Macaca_fascicularis
ENSSLDG00000016303	tsen54	97	45.543	ENSMNEG00000029199	TSEN54	97	45.038	Macaca_nemestrina
ENSSLDG00000016303	tsen54	86	44.105	ENSMLEG00000044168	TSEN54	88	43.562	Mandrillus_leucophaeus
ENSSLDG00000016303	tsen54	100	79.769	ENSMAMG00000019773	tsen54	100	79.961	Mastacembelus_armatus
ENSSLDG00000016303	tsen54	100	76.660	ENSMZEG00005000884	tsen54	100	75.901	Maylandia_zebra
ENSSLDG00000016303	tsen54	93	44.600	ENSMGAG00000009556	TSEN54	92	44.890	Meleagris_gallopavo
ENSSLDG00000016303	tsen54	97	45.769	ENSMAUG00000016838	Tsen54	97	45.769	Mesocricetus_auratus
ENSSLDG00000016303	tsen54	97	45.049	ENSMICG00000044012	TSEN54	96	46.821	Microcebus_murinus
ENSSLDG00000016303	tsen54	97	44.942	ENSMOCG00000021585	Tsen54	97	44.942	Microtus_ochrogaster
ENSSLDG00000016303	tsen54	96	69.444	ENSMMOG00000020189	tsen54	99	69.444	Mola_mola
ENSSLDG00000016303	tsen54	97	44.423	ENSMODG00000007438	TSEN54	95	44.423	Monodelphis_domestica
ENSSLDG00000016303	tsen54	99	81.923	ENSMALG00000020573	tsen54	99	81.923	Monopterus_albus
ENSSLDG00000016303	tsen54	97	44.762	MGP_CAROLIEiJ_G0017417	Tsen54	97	44.762	Mus_caroli
ENSSLDG00000016303	tsen54	97	45.143	ENSMUSG00000020781	Tsen54	97	45.143	Mus_musculus
ENSSLDG00000016303	tsen54	97	46.008	MGP_PahariEiJ_G0018547	Tsen54	97	46.008	Mus_pahari
ENSSLDG00000016303	tsen54	97	44.571	MGP_SPRETEiJ_G0018262	Tsen54	97	44.571	Mus_spretus
ENSSLDG00000016303	tsen54	97	43.021	ENSMPUG00000013870	TSEN54	97	43.977	Mustela_putorius_furo
ENSSLDG00000016303	tsen54	97	41.985	ENSMLUG00000015298	TSEN54	96	44.246	Myotis_lucifugus
ENSSLDG00000016303	tsen54	97	46.304	ENSNGAG00000015673	Tsen54	97	46.304	Nannospalax_galili
ENSSLDG00000016303	tsen54	88	40.329	ENSMEUG00000011908	TSEN54	99	40.535	Notamacropus_eugenii
ENSSLDG00000016303	tsen54	97	42.636	ENSOPRG00000012513	TSEN54	96	42.636	Ochotona_princeps
ENSSLDG00000016303	tsen54	100	76.894	ENSONIG00000009543	tsen54	100	76.326	Oreochromis_niloticus
ENSSLDG00000016303	tsen54	97	42.994	ENSOCUG00000009875	TSEN54	97	42.639	Oryctolagus_cuniculus
ENSSLDG00000016303	tsen54	100	65.643	ENSORLG00000000852	tsen54	100	65.451	Oryzias_latipes
ENSSLDG00000016303	tsen54	100	65.067	ENSORLG00020018221	tsen54	100	65.643	Oryzias_latipes_hni
ENSSLDG00000016303	tsen54	98	65.815	ENSORLG00015009413	tsen54	99	66.405	Oryzias_latipes_hsok
ENSSLDG00000016303	tsen54	100	67.823	ENSOMEG00000014402	tsen54	97	67.823	Oryzias_melastigma
ENSSLDG00000016303	tsen54	97	46.004	ENSOGAG00000001442	TSEN54	97	46.004	Otolemur_garnettii
ENSSLDG00000016303	tsen54	86	42.140	ENSOARG00000010361	TSEN54	99	43.478	Ovis_aries
ENSSLDG00000016303	tsen54	94	45.020	ENSPPAG00000043519	TSEN54	99	45.419	Pan_paniscus
ENSSLDG00000016303	tsen54	97	45.402	ENSPPRG00000009162	TSEN54	97	45.698	Panthera_pardus
ENSSLDG00000016303	tsen54	86	43.319	ENSPTIG00000019312	TSEN54	96	44.662	Panthera_tigris_altaica
ENSSLDG00000016303	tsen54	97	45.930	ENSPTRG00000009646	TSEN54	97	45.420	Pan_troglodytes
ENSSLDG00000016303	tsen54	97	45.349	ENSPANG00000020133	TSEN54	96	44.847	Papio_anubis
ENSSLDG00000016303	tsen54	99	53.636	ENSPKIG00000023018	tsen54	99	54.394	Paramormyrops_kingsleyae
ENSSLDG00000016303	tsen54	81	44.545	ENSPSIG00000012807	TSEN54	100	44.545	Pelodiscus_sinensis
ENSSLDG00000016303	tsen54	93	49.084	ENSPMGG00000019578	tsen54	100	49.084	Periophthalmus_magnuspinnatus
ENSSLDG00000016303	tsen54	97	45.402	ENSPEMG00000014857	Tsen54	97	45.402	Peromyscus_maniculatus_bairdii
ENSSLDG00000016303	tsen54	100	71.183	ENSPFOG00000022740	tsen54	100	71.183	Poecilia_formosa
ENSSLDG00000016303	tsen54	100	71.538	ENSPLAG00000014847	tsen54	100	71.538	Poecilia_latipinna
ENSSLDG00000016303	tsen54	100	71.731	ENSPMEG00000022876	tsen54	100	71.731	Poecilia_mexicana
ENSSLDG00000016303	tsen54	100	70.769	ENSPREG00000013090	tsen54	100	70.769	Poecilia_reticulata
ENSSLDG00000016303	tsen54	91	44.770	ENSPPYG00000008629	TSEN54	99	44.770	Pongo_abelii
ENSSLDG00000016303	tsen54	72	59.873	ENSPCAG00000002093	TSEN54	75	59.873	Procavia_capensis
ENSSLDG00000016303	tsen54	97	45.068	ENSPCOG00000027880	TSEN54	97	45.946	Propithecus_coquereli
ENSSLDG00000016303	tsen54	97	45.385	ENSPVAG00000008446	TSEN54	97	46.035	Pteropus_vampyrus
ENSSLDG00000016303	tsen54	94	75.200	ENSPNYG00000010217	tsen54	100	74.400	Pundamilia_nyererei
ENSSLDG00000016303	tsen54	97	55.985	ENSPNAG00000003770	tsen54	97	55.985	Pygocentrus_nattereri
ENSSLDG00000016303	tsen54	97	46.693	ENSRNOG00000004598	Tsen54	97	46.693	Rattus_norvegicus
ENSSLDG00000016303	tsen54	97	45.543	ENSRBIG00000043040	TSEN54	97	44.656	Rhinopithecus_bieti
ENSSLDG00000016303	tsen54	97	45.543	ENSRROG00000030797	TSEN54	97	44.656	Rhinopithecus_roxellana
ENSSLDG00000016303	tsen54	97	42.829	ENSSBOG00000013543	TSEN54	96	43.217	Saimiri_boliviensis_boliviensis
ENSSLDG00000016303	tsen54	97	43.667	ENSSHAG00000018127	TSEN54	96	43.478	Sarcophilus_harrisii
ENSSLDG00000016303	tsen54	81	57.710	ENSSFOG00015004093	tsen54	99	57.710	Scleropages_formosus
ENSSLDG00000016303	tsen54	97	76.265	ENSSMAG00000012449	tsen54	98	76.265	Scophthalmus_maximus
ENSSLDG00000016303	tsen54	100	98.844	ENSSDUG00000021506	tsen54	100	98.844	Seriola_dumerili
ENSSLDG00000016303	tsen54	80	43.560	ENSSPUG00000008988	TSEN54	96	43.091	Sphenodon_punctatus
ENSSLDG00000016303	tsen54	93	79.381	ENSSPAG00000008098	-	100	79.381	Stegastes_partitus
ENSSLDG00000016303	tsen54	81	72.857	ENSSPAG00000008047	tsen54	100	72.857	Stegastes_partitus
ENSSLDG00000016303	tsen54	97	45.543	ENSSSCG00000036852	TSEN54	97	46.408	Sus_scrofa
ENSSLDG00000016303	tsen54	86	46.053	ENSTGUG00000008548	TSEN54	99	46.053	Taeniopygia_guttata
ENSSLDG00000016303	tsen54	100	68.208	ENSTRUG00000004230	tsen54	100	68.208	Takifugu_rubripes
ENSSLDG00000016303	tsen54	97	64.093	ENSTNIG00000011281	tsen54	98	65.251	Tetraodon_nigroviridis
ENSSLDG00000016303	tsen54	86	42.670	ENSTTRG00000015828	TSEN54	99	43.137	Tursiops_truncatus
ENSSLDG00000016303	tsen54	81	41.284	ENSUAMG00000010045	TSEN54	99	42.466	Ursus_americanus
ENSSLDG00000016303	tsen54	83	42.762	ENSUMAG00000008979	TSEN54	99	43.681	Ursus_maritimus
ENSSLDG00000016303	tsen54	96	45.068	ENSVVUG00000011411	TSEN54	97	45.631	Vulpes_vulpes
ENSSLDG00000016303	tsen54	97	46.109	ENSXETG00000012532	tsen54	100	60.000	Xenopus_tropicalis
ENSSLDG00000016303	tsen54	97	62.451	ENSXCOG00000018245	tsen54	100	66.824	Xiphophorus_couchianus
ENSSLDG00000016303	tsen54	100	71.346	ENSXMAG00000018818	tsen54	100	71.346	Xiphophorus_maculatus