EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSLDG00000016454 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
transcriptional repressor scratch 1-like
Gene Type
protein_coding
Species
Seriola_lalandi_dorsalis
Status
putative
Strand
Plus strand
Length
6716 bases
Position
chrPEQF01098887.1:1768104-1774819
Accession
111657568
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSLDP00000021055zf-C2H2PF00096.263.2e-2514
ENSSLDP00000021055zf-C2H2PF00096.263.2e-2524
ENSSLDP00000021055zf-C2H2PF00096.263.2e-2534
ENSSLDP00000021055zf-C2H2PF00096.263.2e-2544
ENSSLDP00000021055zf-metPF12874.77.6e-0911
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSLDT00000021751-900XM_023409780ENSSLDP00000021055299 (aa)XP_023265548UPI000C6F9A69
Gene Model
Click here to download ENSSLDG00000016454's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000016454's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSLDG00000016454-6144.000ENSSLDG00000012821znf2365744.000
ENSSLDG00000016454-6939.423ENSSLDG00000006994-9139.423
ENSSLDG00000016454-5135.606ENSSLDG00000005670-8335.606
ENSSLDG00000016454-5144.156ENSSLDG00000018273-8144.156
ENSSLDG00000016454-6637.121ENSSLDG00000020990-8337.121
ENSSLDG00000016454-5137.324ENSSLDG00000016301-9037.324
ENSSLDG00000016454-5340.714ENSSLDG00000020675-8650.000
ENSSLDG00000016454-5336.036ENSSLDG00000018033-7136.036
ENSSLDG00000016454-5236.434ENSSLDG00000000859-9036.434
ENSSLDG00000016454-5035.294ENSSLDG00000005839-5335.294
ENSSLDG00000016454-6040.196ENSSLDG00000014166znf319b5840.196
ENSSLDG00000016454-5640.127ENSSLDG00000013760-9240.127
ENSSLDG00000016454-9759.688ENSSLDG00000013565scrt29759.688
ENSSLDG00000016454-7241.071ENSSLDG00000013823gfi1b6441.071
ENSSLDG00000016454-6635.780ENSSLDG00000003269znf710b5435.780
ENSSLDG00000016454-5233.333ENSSLDG00000023060-5433.333
ENSSLDG00000016454-5140.659ENSSLDG00000006288-9240.659
ENSSLDG00000016454-9640.940ENSSLDG00000012852snai29840.940
ENSSLDG00000016454-5142.857ENSSLDG00000018598-8342.857
ENSSLDG00000016454-5637.594ENSSLDG00000025265znf5265037.594
ENSSLDG00000016454-5143.750ENSSLDG00000020727-9443.750
ENSSLDG00000016454-5040.860ENSSLDG00000016317-8340.860
ENSSLDG00000016454-5040.741ENSSLDG00000000352-6840.741
ENSSLDG00000016454-6435.714ENSSLDG00000012133-9335.714
ENSSLDG00000016454-5148.052ENSSLDG00000013170zbtb176940.506
ENSSLDG00000016454-5236.842ENSSLDG00000000202-9836.842
ENSSLDG00000016454-5735.766ENSSLDG00000021278-6835.766
ENSSLDG00000016454-6538.636ENSSLDG00000023661-9738.636
ENSSLDG00000016454-5638.346ENSSLDG00000004485-5238.346
ENSSLDG00000016454-5832.353ENSSLDG00000000464-6332.353
ENSSLDG00000016454-5347.368ENSSLDG00000001860-8747.368
ENSSLDG00000016454-5846.154ENSSLDG00000024295ZNF3196246.154
ENSSLDG00000016454-9977.667ENSSLDG00000017166scrt1b9977.667
ENSSLDG00000016454-5239.259ENSSLDG00000000376-7139.259
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSLDG00000016454-10090.970ENSAPOG00000015197-10090.970Acanthochromis_polyacanthus
ENSSLDG00000016454-9977.000ENSAPOG00000009279scrt1b9977.000Acanthochromis_polyacanthus
ENSSLDG00000016454-9763.448ENSAPOG00000003680scrt29663.448Acanthochromis_polyacanthus
ENSSLDG00000016454-10097.659ENSACIG00000006586-10097.659Amphilophus_citrinellus
ENSSLDG00000016454-9761.953ENSACIG00000012604scrt29661.953Amphilophus_citrinellus
ENSSLDG00000016454-9976.254ENSACIG00000013613scrt1b9976.254Amphilophus_citrinellus
ENSSLDG00000016454-9754.313ENSACIG00000001296-9653.355Amphilophus_citrinellus
ENSSLDG00000016454-9763.448ENSAOCG00000021557scrt29663.448Amphiprion_ocellaris
ENSSLDG00000016454-9977.000ENSAOCG00000003910scrt1b9977.000Amphiprion_ocellaris
ENSSLDG00000016454-10097.324ENSAOCG00000023304-10097.324Amphiprion_ocellaris
ENSSLDG00000016454-9976.667ENSAPEG00000000869scrt1b9976.667Amphiprion_percula
ENSSLDG00000016454-10097.324ENSAPEG00000005677-10097.324Amphiprion_percula
ENSSLDG00000016454-9763.448ENSAPEG00000022558scrt29663.448Amphiprion_percula
ENSSLDG00000016454-9753.153ENSATEG00000003195-9753.153Anabas_testudineus
ENSSLDG00000016454-10088.629ENSATEG00000011660-10088.629Anabas_testudineus
ENSSLDG00000016454-9760.000ENSATEG00000023998scrt29760.000Anabas_testudineus
ENSSLDG00000016454-9976.589ENSATEG00000002302scrt1b9977.667Anabas_testudineus
ENSSLDG00000016454-6979.126ENSACAG00000016109SCRT29279.126Anolis_carolinensis
ENSSLDG00000016454-10094.059ENSACLG00000012046-10094.059Astatotilapia_calliptera
ENSSLDG00000016454-9977.000ENSACLG00000007162scrt1b9977.000Astatotilapia_calliptera
ENSSLDG00000016454-9979.866ENSAMXG00000038085scrt1a9979.866Astyanax_mexicanus
ENSSLDG00000016454-9974.497ENSAMXG00000042624SCRT110074.497Astyanax_mexicanus
ENSSLDG00000016454-8367.600ENSAMXG00000034158scrt28767.600Astyanax_mexicanus
ENSSLDG00000016454-5559.509WBGene00000468ces-17947.186Caenorhabditis_elegans
ENSSLDG00000016454-8757.303ENSCPBG00000027613SCRT210057.303Chrysemys_picta_bellii
ENSSLDG00000016454-9976.174ENSCPBG00000018899SCRT19976.174Chrysemys_picta_bellii
ENSSLDG00000016454-9975.585ENSCSEG00000008596scrt1b9977.000Cynoglossus_semilaevis
ENSSLDG00000016454-9760.828ENSCSEG00000021542scrt29760.828Cynoglossus_semilaevis
ENSSLDG00000016454-10093.645ENSCSEG00000014892-10093.645Cynoglossus_semilaevis
ENSSLDG00000016454-10095.987ENSCVAG00000003190-10095.987Cyprinodon_variegatus
ENSSLDG00000016454-9976.333ENSCVAG00000009561scrt1b9976.333Cyprinodon_variegatus
ENSSLDG00000016454-9759.561ENSCVAG00000021038scrt29759.561Cyprinodon_variegatus
ENSSLDG00000016454-9977.517ENSDARG00000040214scrt1b9977.517Danio_rerio
ENSSLDG00000016454-9978.859ENSDARG00000100821scrt1a9978.859Danio_rerio
ENSSLDG00000016454-9661.290ENSELUG00000023883scrt29659.752Esox_lucius
ENSSLDG00000016454-10078.000ENSELUG00000022228scrt1a10078.000Esox_lucius
ENSSLDG00000016454-9978.716ENSELUG00000005435scrt1b9878.716Esox_lucius
ENSSLDG00000016454-6778.500ENSFALG00000005718SCRT29767.200Ficedula_albicollis
ENSSLDG00000016454-9758.478ENSFDAG00000008733SCRT19758.478Fukomys_damarensis
ENSSLDG00000016454-9977.000ENSFHEG00000014820scrt1b9977.000Fundulus_heteroclitus
ENSSLDG00000016454-10095.652ENSFHEG00000009794-10095.652Fundulus_heteroclitus
ENSSLDG00000016454-9764.948ENSFHEG00000005732scrt29664.948Fundulus_heteroclitus
ENSSLDG00000016454-9756.604ENSGMOG00000019519scrt29656.604Gadus_morhua
ENSSLDG00000016454-5697.619ENSGMOG00000013833-5697.619Gadus_morhua
ENSSLDG00000016454-9975.585ENSGMOG00000000629scrt1b9975.585Gadus_morhua
ENSSLDG00000016454-9761.034ENSGALG00000028912SCRT29761.724Gallus_gallus
ENSSLDG00000016454-10086.288ENSGAFG00000009650-10086.288Gambusia_affinis
ENSSLDG00000016454-9977.000ENSGAFG00000007636scrt1b9977.000Gambusia_affinis
ENSSLDG00000016454-9762.215ENSGAFG00000003093scrt29762.215Gambusia_affinis
ENSSLDG00000016454-9974.497ENSGACG00000008982scrt1b9974.497Gasterosteus_aculeatus
ENSSLDG00000016454-10090.301ENSGACG00000004072-10090.301Gasterosteus_aculeatus
ENSSLDG00000016454-9660.764ENSGAGG00000020761SCRT29661.111Gopherus_agassizii
ENSSLDG00000016454-5981.356ENSGAGG00000020760-6881.921Gopherus_agassizii
ENSSLDG00000016454-9976.689ENSGAGG00000011736SCRT19976.689Gopherus_agassizii
ENSSLDG00000016454-9763.448ENSHBUG00000012492scrt29663.448Haplochromis_burtoni
ENSSLDG00000016454-9977.000ENSHBUG00000016621scrt1b9977.000Haplochromis_burtoni
ENSSLDG00000016454-10096.990ENSHBUG00000019101-10096.990Haplochromis_burtoni
ENSSLDG00000016454-9976.667ENSHCOG00000016704scrt1b9976.667Hippocampus_comes
ENSSLDG00000016454-10073.770ENSHCOG00000016179-10073.770Hippocampus_comes
ENSSLDG00000016454-9759.871ENSHCOG00000008116scrt29759.871Hippocampus_comes
ENSSLDG00000016454-9971.284ENSIPUG00000005547-10071.284Ictalurus_punctatus
ENSSLDG00000016454-9878.644ENSIPUG00000004551scrt1a9978.644Ictalurus_punctatus
ENSSLDG00000016454-10095.017ENSKMAG00000009489-10095.017Kryptolebias_marmoratus
ENSSLDG00000016454-9760.188ENSKMAG00000018087scrt29760.188Kryptolebias_marmoratus
ENSSLDG00000016454-9977.000ENSKMAG00000005484scrt1b9977.000Kryptolebias_marmoratus
ENSSLDG00000016454-9759.688ENSLBEG00000015419scrt29759.502Labrus_bergylta
ENSSLDG00000016454-10092.642ENSLBEG00000023388-10092.642Labrus_bergylta
ENSSLDG00000016454-9975.839ENSLACG00000003588SCRT19975.839Latimeria_chalumnae
ENSSLDG00000016454-9753.251ENSLOCG00000002246scrt29753.211Lepisosteus_oculatus
ENSSLDG00000016454-9979.195ENSLOCG00000007573scrt1b9979.195Lepisosteus_oculatus
ENSSLDG00000016454-9691.852ENSMFAG00000035496SCRT19288.966Macaca_fascicularis
ENSSLDG00000016454-9760.000ENSMAMG00000001291scrt29759.688Mastacembelus_armatus
ENSSLDG00000016454-9975.920ENSMAMG00000011698scrt1b9977.000Mastacembelus_armatus
ENSSLDG00000016454-9763.448ENSMZEG00005026445scrt29663.448Maylandia_zebra
ENSSLDG00000016454-9977.000ENSMZEG00005005627scrt1b9977.000Maylandia_zebra
ENSSLDG00000016454-10096.990ENSMZEG00005026702-10096.990Maylandia_zebra
ENSSLDG00000016454-6580.829ENSMGAG00000016579SCRT28080.829Meleagris_gallopavo
ENSSLDG00000016454-9761.076ENSMMOG00000009272scrt29760.883Mola_mola
ENSSLDG00000016454-10093.667ENSMMOG00000018345-10093.667Mola_mola
ENSSLDG00000016454-9975.000ENSMMOG00000003327scrt1b9975.000Mola_mola
ENSSLDG00000016454-9762.671ENSMALG00000013656scrt29662.671Monopterus_albus
ENSSLDG00000016454-9976.589ENSMALG00000012704scrt1b9977.667Monopterus_albus
ENSSLDG00000016454-6068.649ENSNGAG00000020815Scrt29167.895Nannospalax_galili
ENSSLDG00000016454-9763.103ENSNBRG00000007221scrt29663.103Neolamprologus_brichardi
ENSSLDG00000016454-10097.324ENSNBRG00000014882-10097.324Neolamprologus_brichardi
ENSSLDG00000016454-9973.913ENSNBRG00000013983scrt1b9973.913Neolamprologus_brichardi
ENSSLDG00000016454-9792.131ENSONIG00000019809-10092.131Oreochromis_niloticus
ENSSLDG00000016454-9977.000ENSONIG00000006007scrt1b9977.000Oreochromis_niloticus
ENSSLDG00000016454-9757.045ENSONIG00000003152-9657.045Oreochromis_niloticus
ENSSLDG00000016454-9760.188ENSONIG00000016758scrt29760.188Oreochromis_niloticus
ENSSLDG00000016454-9975.585ENSORLG00000025651scrt1b9976.333Oryzias_latipes
ENSSLDG00000016454-9760.188ENSORLG00000024051scrt29760.188Oryzias_latipes
ENSSLDG00000016454-10089.769ENSORLG00000022825-10089.769Oryzias_latipes
ENSSLDG00000016454-9760.188ENSORLG00020011478scrt29760.188Oryzias_latipes_hni
ENSSLDG00000016454-9975.585ENSORLG00020012967scrt1b9976.333Oryzias_latipes_hni
ENSSLDG00000016454-10089.769ENSORLG00015010104-10089.769Oryzias_latipes_hsok
ENSSLDG00000016454-9975.585ENSORLG00015019165scrt1b9976.333Oryzias_latipes_hsok
ENSSLDG00000016454-9760.188ENSORLG00015005524scrt29760.188Oryzias_latipes_hsok
ENSSLDG00000016454-9975.585ENSOMEG00000003925scrt1b9976.333Oryzias_melastigma
ENSSLDG00000016454-10092.308ENSOMEG00000000286-10092.308Oryzias_melastigma
ENSSLDG00000016454-9760.188ENSOMEG00000002661scrt29760.188Oryzias_melastigma
ENSSLDG00000016454-9978.188ENSPKIG00000022303SCRT19978.188Paramormyrops_kingsleyae
ENSSLDG00000016454-9979.195ENSPKIG00000020085scrt1a9979.195Paramormyrops_kingsleyae
ENSSLDG00000016454-10088.963ENSPMGG00000021402-10088.963Periophthalmus_magnuspinnatus
ENSSLDG00000016454-9764.626ENSPMGG00000016561scrt29664.626Periophthalmus_magnuspinnatus
ENSSLDG00000016454-9973.579ENSPMGG00000002260scrt1b9973.579Periophthalmus_magnuspinnatus
ENSSLDG00000016454-10095.987ENSPFOG00000005616-10095.987Poecilia_formosa
ENSSLDG00000016454-9759.875ENSPFOG00000007738scrt29759.875Poecilia_formosa
ENSSLDG00000016454-9977.000ENSPFOG00000017719scrt1b9977.000Poecilia_formosa
ENSSLDG00000016454-9977.000ENSPLAG00000009876scrt1b9977.000Poecilia_latipinna
ENSSLDG00000016454-9764.828ENSPLAG00000005765scrt29664.828Poecilia_latipinna
ENSSLDG00000016454-10095.987ENSPLAG00000011718-10095.987Poecilia_latipinna
ENSSLDG00000016454-10095.987ENSPMEG00000011706-10095.987Poecilia_mexicana
ENSSLDG00000016454-9977.000ENSPMEG00000013274scrt1b9977.000Poecilia_mexicana
ENSSLDG00000016454-9764.828ENSPMEG00000001538scrt29664.828Poecilia_mexicana
ENSSLDG00000016454-10095.318ENSPREG00000012166-10095.318Poecilia_reticulata
ENSSLDG00000016454-9977.000ENSPREG00000018985scrt1b9977.000Poecilia_reticulata
ENSSLDG00000016454-9759.875ENSPREG00000001147scrt29759.875Poecilia_reticulata
ENSSLDG00000016454-9763.448ENSPNYG00000013109scrt29663.448Pundamilia_nyererei
ENSSLDG00000016454-10096.656ENSPNYG00000008865-10096.656Pundamilia_nyererei
ENSSLDG00000016454-9977.000ENSPNYG00000017733scrt1b9977.000Pundamilia_nyererei
ENSSLDG00000016454-9979.866ENSPNAG00000017415scrt1a9979.866Pygocentrus_nattereri
ENSSLDG00000016454-9973.826ENSPNAG00000027880-10074.161Pygocentrus_nattereri
ENSSLDG00000016454-9977.517ENSSFOG00015001195SCRT19977.517Scleropages_formosus
ENSSLDG00000016454-10092.409ENSSMAG00000005122-10092.409Scophthalmus_maximus
ENSSLDG00000016454-10076.744ENSSMAG00000019207scrt1b10076.744Scophthalmus_maximus
ENSSLDG00000016454-9860.252ENSSDUG00000001637scrt29660.063Seriola_dumerili
ENSSLDG00000016454-100100.000ENSSDUG00000013215-100100.000Seriola_dumerili
ENSSLDG00000016454-9977.667ENSSDUG00000007752scrt1b9977.667Seriola_dumerili
ENSSLDG00000016454-9762.069ENSSPUG00000018637SCRT29762.069Sphenodon_punctatus
ENSSLDG00000016454-10096.990ENSSPAG00000006788-10096.990Stegastes_partitus
ENSSLDG00000016454-9763.793ENSSPAG00000014018scrt29663.793Stegastes_partitus
ENSSLDG00000016454-9977.667ENSSPAG00000002200scrt1b9977.667Stegastes_partitus
ENSSLDG00000016454-6778.392ENSTGUG00000006801SCRT29967.068Taeniopygia_guttata
ENSSLDG00000016454-8681.395ENSTRUG00000019558-8282.171Takifugu_rubripes
ENSSLDG00000016454-9975.585ENSTRUG00000011637scrt1b10075.585Takifugu_rubripes
ENSSLDG00000016454-9761.146ENSTRUG00000007620scrt29761.146Takifugu_rubripes
ENSSLDG00000016454-10089.967ENSTRUG00000012719-10090.635Takifugu_rubripes
ENSSLDG00000016454-9765.306ENSTNIG00000012473scrt29765.306Tetraodon_nigroviridis
ENSSLDG00000016454-9976.000ENSTNIG00000018384scrt1b9976.000Tetraodon_nigroviridis
ENSSLDG00000016454-9761.889ENSXCOG00000014367scrt29761.889Xiphophorus_couchianus
ENSSLDG00000016454-9977.333ENSXCOG00000019675scrt1b9977.333Xiphophorus_couchianus
ENSSLDG00000016454-10085.619ENSXCOG00000019861-10085.619Xiphophorus_couchianus
ENSSLDG00000016454-10095.318ENSXMAG00000015353-10095.318Xiphophorus_maculatus
ENSSLDG00000016454-9977.333ENSXMAG00000027885scrt1b9977.333Xiphophorus_maculatus
ENSSLDG00000016454-9759.561ENSXMAG00000028567scrt29759.561Xiphophorus_maculatus

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