EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000016463 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: CCA tRNA nucleotidyltransferase 1%2C mitochondrial-like
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 10445 bases
Position: chrPEQF01099585.1:147132-157576
Accession: 111648065
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000021147	PolyA_pol	PF01743.20	4.6e-15	1	1
ENSSLDP00000021130	PolyA_pol	PF01743.20	4.7e-15	1	1
ENSSLDP00000021160	PolyA_pol	PF01743.20	4.7e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000021846	-	1035	-	ENSSLDP00000021147	344 (aa)	-	-
ENSSLDT00000021860	-	1044	-	ENSSLDP00000021160	347 (aa)	-	-
ENSSLDT00000021828	-	780	XM_023397820	ENSSLDP00000021130	259 (aa)	XP_023253588	-

Gene Model

Click here to download ENSSLDG00000016463's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000016463's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000016463	-	91	97.908	ENSSLDG00000009325	trnt1	57	97.510

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000016463	-	96	62.451	ENSG00000072756	TRNT1	56	64.730	Homo_sapiens
ENSSLDG00000016463	-	91	84.937	ENSAPOG00000013687	trnt1	56	84.937	Acanthochromis_polyacanthus
ENSSLDG00000016463	-	91	64.315	ENSAMEG00000014520	TRNT1	56	64.198	Ailuropoda_melanoleuca
ENSSLDG00000016463	-	91	86.611	ENSACIG00000021706	trnt1	57	86.307	Amphilophus_citrinellus
ENSSLDG00000016463	-	91	87.866	ENSAOCG00000024612	trnt1	56	87.866	Amphiprion_ocellaris
ENSSLDG00000016463	-	97	77.395	ENSAPEG00000022627	trnt1	67	74.453	Amphiprion_percula
ENSSLDG00000016463	-	91	88.703	ENSATEG00000008928	trnt1	60	88.382	Anabas_testudineus
ENSSLDG00000016463	-	91	63.598	ENSAPLG00000004258	TRNT1	60	63.485	Anas_platyrhynchos
ENSSLDG00000016463	-	91	64.435	ENSACAG00000005657	TRNT1	55	64.435	Anolis_carolinensis
ENSSLDG00000016463	-	96	61.660	ENSANAG00000024802	TRNT1	56	63.900	Aotus_nancymaae
ENSSLDG00000016463	-	91	84.519	ENSACLG00000022227	trnt1	56	84.519	Astatotilapia_calliptera
ENSSLDG00000016463	-	91	74.477	ENSAMXG00000003960	trnt1	56	74.274	Astyanax_mexicanus
ENSSLDG00000016463	-	91	64.017	ENSBTAG00000019534	TRNT1	56	63.900	Bos_taurus
ENSSLDG00000016463	-	96	61.660	ENSCJAG00000015466	TRNT1	56	63.900	Callithrix_jacchus
ENSSLDG00000016463	-	91	64.435	ENSCAFG00000005985	TRNT1	55	64.435	Canis_familiaris
ENSSLDG00000016463	-	91	64.435	ENSCAFG00020014746	TRNT1	55	64.435	Canis_lupus_dingo
ENSSLDG00000016463	-	91	64.017	ENSCHIG00000007030	TRNT1	55	64.017	Capra_hircus
ENSSLDG00000016463	-	91	64.017	ENSTSYG00000013390	TRNT1	56	63.900	Carlito_syrichta
ENSSLDG00000016463	-	90	54.622	ENSCAPG00000006891	TRNT1	66	53.252	Cavia_aperea
ENSSLDG00000016463	-	96	61.265	ENSCPOG00000007849	TRNT1	56	63.485	Cavia_porcellus
ENSSLDG00000016463	-	96	62.055	ENSCCAG00000002919	TRNT1	63	62.055	Cebus_capucinus
ENSSLDG00000016463	-	91	64.854	ENSCATG00000031985	TRNT1	55	64.730	Cercocebus_atys
ENSSLDG00000016463	-	96	60.870	ENSCLAG00000005186	TRNT1	56	63.071	Chinchilla_lanigera
ENSSLDG00000016463	-	91	64.854	ENSCSAG00000011052	TRNT1	56	64.730	Chlorocebus_sabaeus
ENSSLDG00000016463	-	91	64.854	ENSCPBG00000017636	TRNT1	55	64.854	Chrysemys_picta_bellii
ENSSLDG00000016463	-	91	40.586	ENSCING00000007069	-	61	39.683	Ciona_intestinalis
ENSSLDG00000016463	-	82	44.240	ENSCSAVG00000007494	-	52	45.909	Ciona_savignyi
ENSSLDG00000016463	-	91	65.272	ENSCANG00000039030	TRNT1	56	65.145	Colobus_angolensis_palliatus
ENSSLDG00000016463	-	91	62.762	ENSCGRG00001009998	Trnt1	56	62.656	Cricetulus_griseus_chok1gshd
ENSSLDG00000016463	-	91	62.762	ENSCGRG00000013410	Trnt1	56	62.656	Cricetulus_griseus_crigri
ENSSLDG00000016463	-	91	83.682	ENSCSEG00000008157	trnt1	59	83.682	Cynoglossus_semilaevis
ENSSLDG00000016463	-	91	84.100	ENSCVAG00000019770	trnt1	57	83.817	Cyprinodon_variegatus
ENSSLDG00000016463	-	91	77.824	ENSDARG00000075297	trnt1	56	77.593	Danio_rerio
ENSSLDG00000016463	-	91	64.854	ENSDNOG00000008837	TRNT1	56	64.730	Dasypus_novemcinctus
ENSSLDG00000016463	-	91	64.017	ENSDORG00000014035	Trnt1	56	63.900	Dipodomys_ordii
ENSSLDG00000016463	-	58	71.895	ENSETEG00000018177	TRNT1	62	73.718	Echinops_telfairi
ENSSLDG00000016463	-	90	60.759	ENSEBUG00000012779	-	56	60.759	Eptatretus_burgeri
ENSSLDG00000016463	-	91	65.272	ENSEASG00005003577	TRNT1	56	65.145	Equus_asinus_asinus
ENSSLDG00000016463	-	91	65.690	ENSECAG00000014420	TRNT1	58	65.690	Equus_caballus
ENSSLDG00000016463	-	91	64.854	ENSEEUG00000009567	TRNT1	56	64.730	Erinaceus_europaeus
ENSSLDG00000016463	-	91	78.243	ENSELUG00000003802	trnt1	56	78.243	Esox_lucius
ENSSLDG00000016463	-	91	64.017	ENSFCAG00000026805	TRNT1	55	64.017	Felis_catus
ENSSLDG00000016463	-	91	64.017	ENSFALG00000013539	TRNT1	67	61.004	Ficedula_albicollis
ENSSLDG00000016463	-	91	64.017	ENSFDAG00000018412	TRNT1	56	63.900	Fukomys_damarensis
ENSSLDG00000016463	-	91	83.264	ENSFHEG00000019294	trnt1	57	82.988	Fundulus_heteroclitus
ENSSLDG00000016463	-	91	81.590	ENSGMOG00000007460	trnt1	62	76.718	Gadus_morhua
ENSSLDG00000016463	-	91	62.343	ENSGALG00000017368	TRNT1	56	62.241	Gallus_gallus
ENSSLDG00000016463	-	91	82.845	ENSGAFG00000008647	trnt1	57	82.573	Gambusia_affinis
ENSSLDG00000016463	-	91	87.448	ENSGACG00000011903	trnt1	60	87.448	Gasterosteus_aculeatus
ENSSLDG00000016463	-	91	66.527	ENSGAGG00000020942	TRNT1	55	66.390	Gopherus_agassizii
ENSSLDG00000016463	-	96	62.846	ENSGGOG00000015286	TRNT1	56	65.145	Gorilla_gorilla
ENSSLDG00000016463	-	91	84.937	ENSHBUG00000002797	trnt1	56	84.937	Haplochromis_burtoni
ENSSLDG00000016463	-	96	60.474	ENSHGLG00000003649	TRNT1	56	62.656	Heterocephalus_glaber_female
ENSSLDG00000016463	-	91	59.583	ENSHGLG00000000221	-	57	58.300	Heterocephalus_glaber_female
ENSSLDG00000016463	-	97	60.236	ENSHGLG00100016421	TRNT1	65	56.184	Heterocephalus_glaber_male
ENSSLDG00000016463	-	91	77.824	ENSHCOG00000010618	trnt1	56	77.824	Hippocampus_comes
ENSSLDG00000016463	-	91	73.640	ENSIPUG00000000971	trnt1	55	73.640	Ictalurus_punctatus
ENSSLDG00000016463	-	91	62.762	ENSSTOG00000000150	TRNT1	55	62.762	Ictidomys_tridecemlineatus
ENSSLDG00000016463	-	91	63.180	ENSJJAG00000018561	Trnt1	58	61.111	Jaculus_jaculus
ENSSLDG00000016463	-	91	85.774	ENSKMAG00000011307	trnt1	57	85.477	Kryptolebias_marmoratus
ENSSLDG00000016463	-	91	76.569	ENSLBEG00000019457	trnt1	55	76.349	Labrus_bergylta
ENSSLDG00000016463	-	91	65.690	ENSLACG00000013227	TRNT1	56	65.560	Latimeria_chalumnae
ENSSLDG00000016463	-	91	70.711	ENSLOCG00000011105	trnt1	53	72.052	Lepisosteus_oculatus
ENSSLDG00000016463	-	91	65.690	ENSLAFG00000023191	TRNT1	56	65.560	Loxodonta_africana
ENSSLDG00000016463	-	91	64.854	ENSMFAG00000045113	TRNT1	55	64.730	Macaca_fascicularis
ENSSLDG00000016463	-	91	64.854	ENSMMUG00000017983	TRNT1	55	64.730	Macaca_mulatta
ENSSLDG00000016463	-	91	64.854	ENSMNEG00000037805	TRNT1	55	64.730	Macaca_nemestrina
ENSSLDG00000016463	-	91	64.854	ENSMLEG00000033671	TRNT1	63	64.730	Mandrillus_leucophaeus
ENSSLDG00000016463	-	91	86.611	ENSMAMG00000023401	trnt1	56	86.611	Mastacembelus_armatus
ENSSLDG00000016463	-	91	84.519	ENSMZEG00005009141	trnt1	56	84.519	Maylandia_zebra
ENSSLDG00000016463	-	91	61.925	ENSMGAG00000009971	TRNT1	75	61.411	Meleagris_gallopavo
ENSSLDG00000016463	-	91	62.343	ENSMAUG00000020707	Trnt1	56	62.449	Mesocricetus_auratus
ENSSLDG00000016463	-	91	64.435	ENSMICG00000016615	TRNT1	56	64.315	Microcebus_murinus
ENSSLDG00000016463	-	91	63.598	ENSMOCG00000004539	Trnt1	56	63.485	Microtus_ochrogaster
ENSSLDG00000016463	-	91	85.774	ENSMMOG00000010742	trnt1	57	85.477	Mola_mola
ENSSLDG00000016463	-	91	62.762	ENSMODG00000004368	TRNT1	56	62.857	Monodelphis_domestica
ENSSLDG00000016463	-	91	83.682	ENSMALG00000008376	trnt1	58	83.402	Monopterus_albus
ENSSLDG00000016463	-	91	63.180	MGP_CAROLIEiJ_G0028698	Trnt1	58	72.152	Mus_caroli
ENSSLDG00000016463	-	91	63.180	ENSMUSG00000013736	Trnt1	56	63.071	Mus_musculus
ENSSLDG00000016463	-	91	63.598	MGP_PahariEiJ_G0022449	Trnt1	56	63.485	Mus_pahari
ENSSLDG00000016463	-	91	63.180	MGP_SPRETEiJ_G0029726	Trnt1	56	63.071	Mus_spretus
ENSSLDG00000016463	-	91	63.750	ENSMPUG00000017017	TRNT1	56	63.636	Mustela_putorius_furo
ENSSLDG00000016463	-	91	64.854	ENSMLUG00000011864	TRNT1	62	64.854	Myotis_lucifugus
ENSSLDG00000016463	-	91	64.017	ENSNGAG00000000537	Trnt1	56	63.900	Nannospalax_galili
ENSSLDG00000016463	-	91	85.000	ENSNBRG00000023606	trnt1	70	84.711	Neolamprologus_brichardi
ENSSLDG00000016463	-	96	62.846	ENSNLEG00000003226	TRNT1	56	65.145	Nomascus_leucogenys
ENSSLDG00000016463	-	91	62.762	ENSMEUG00000004684	TRNT1	57	61.694	Notamacropus_eugenii
ENSSLDG00000016463	-	91	58.333	ENSOPRG00000015067	TRNT1	70	52.797	Ochotona_princeps
ENSSLDG00000016463	-	96	61.660	ENSODEG00000007597	TRNT1	56	63.900	Octodon_degus
ENSSLDG00000016463	-	91	86.192	ENSONIG00000020273	trnt1	56	85.892	Oreochromis_niloticus
ENSSLDG00000016463	-	91	63.598	ENSOANG00000007514	TRNT1	56	63.525	Ornithorhynchus_anatinus
ENSSLDG00000016463	-	91	62.917	ENSOCUG00000008580	TRNT1	56	62.917	Oryctolagus_cuniculus
ENSSLDG00000016463	-	91	78.661	ENSORLG00000003165	trnt1	57	78.661	Oryzias_latipes
ENSSLDG00000016463	-	91	78.661	ENSORLG00020022060	trnt1	57	78.661	Oryzias_latipes_hni
ENSSLDG00000016463	-	91	79.079	ENSORLG00015018915	trnt1	57	78.838	Oryzias_latipes_hsok
ENSSLDG00000016463	-	91	74.895	ENSOMEG00000003331	trnt1	57	74.895	Oryzias_melastigma
ENSSLDG00000016463	-	91	64.017	ENSOARG00000008631	TRNT1	55	64.017	Ovis_aries
ENSSLDG00000016463	-	96	62.846	ENSPPAG00000043566	TRNT1	56	65.145	Pan_paniscus
ENSSLDG00000016463	-	91	64.017	ENSPPRG00000001327	TRNT1	55	64.017	Panthera_pardus
ENSSLDG00000016463	-	91	64.017	ENSPTIG00000011448	TRNT1	55	64.017	Panthera_tigris_altaica
ENSSLDG00000016463	-	96	62.846	ENSPTRG00000014564	TRNT1	56	65.145	Pan_troglodytes
ENSSLDG00000016463	-	91	64.854	ENSPANG00000025944	TRNT1	55	64.730	Papio_anubis
ENSSLDG00000016463	-	91	72.385	ENSPKIG00000020015	trnt1	56	72.199	Paramormyrops_kingsleyae
ENSSLDG00000016463	-	96	62.451	ENSPSIG00000017356	TRNT1	70	62.451	Pelodiscus_sinensis
ENSSLDG00000016463	-	91	77.406	ENSPMGG00000008888	trnt1	56	77.178	Periophthalmus_magnuspinnatus
ENSSLDG00000016463	-	91	62.762	ENSPEMG00000019845	Trnt1	56	62.656	Peromyscus_maniculatus_bairdii
ENSSLDG00000016463	-	91	64.017	ENSPCIG00000030436	TRNT1	57	63.306	Phascolarctos_cinereus
ENSSLDG00000016463	-	91	82.845	ENSPFOG00000006194	trnt1	56	82.845	Poecilia_formosa
ENSSLDG00000016463	-	91	82.845	ENSPLAG00000015623	trnt1	60	82.573	Poecilia_latipinna
ENSSLDG00000016463	-	91	83.264	ENSPMEG00000012216	trnt1	60	82.988	Poecilia_mexicana
ENSSLDG00000016463	-	91	82.427	ENSPREG00000021470	trnt1	57	82.158	Poecilia_reticulata
ENSSLDG00000016463	-	96	62.055	ENSPPYG00000013702	TRNT1	56	64.315	Pongo_abelii
ENSSLDG00000016463	-	91	65.690	ENSPCAG00000001951	TRNT1	63	65.560	Procavia_capensis
ENSSLDG00000016463	-	91	64.435	ENSPCOG00000022228	TRNT1	56	64.315	Propithecus_coquereli
ENSSLDG00000016463	-	91	65.000	ENSPVAG00000008784	TRNT1	64	64.490	Pteropus_vampyrus
ENSSLDG00000016463	-	91	83.682	ENSPNYG00000003120	trnt1	56	83.682	Pundamilia_nyererei
ENSSLDG00000016463	-	91	75.314	ENSPNAG00000000565	trnt1	56	75.104	Pygocentrus_nattereri
ENSSLDG00000016463	-	91	63.180	ENSRNOG00000006432	Trnt1	56	63.071	Rattus_norvegicus
ENSSLDG00000016463	-	91	63.180	ENSRBIG00000042632	TRNT1	54	63.180	Rhinopithecus_bieti
ENSSLDG00000016463	-	91	64.854	ENSRROG00000036866	TRNT1	56	64.730	Rhinopithecus_roxellana
ENSSLDG00000016463	-	96	61.660	ENSSBOG00000021208	TRNT1	56	63.900	Saimiri_boliviensis_boliviensis
ENSSLDG00000016463	-	91	62.762	ENSSHAG00000018861	TRNT1	57	62.097	Sarcophilus_harrisii
ENSSLDG00000016463	-	91	73.640	ENSSFOG00015020844	trnt1	56	73.444	Scleropages_formosus
ENSSLDG00000016463	-	92	87.243	ENSSMAG00000015432	trnt1	55	87.448	Scophthalmus_maximus
ENSSLDG00000016463	-	91	97.071	ENSSDUG00000012320	trnt1	57	96.680	Seriola_dumerili
ENSSLDG00000016463	-	91	66.946	ENSSPUG00000014153	TRNT1	65	64.062	Sphenodon_punctatus
ENSSLDG00000016463	-	91	86.192	ENSSPAG00000021005	trnt1	56	86.192	Stegastes_partitus
ENSSLDG00000016463	-	91	65.417	ENSSSCG00000011529	TRNT1	57	64.490	Sus_scrofa
ENSSLDG00000016463	-	91	64.854	ENSTGUG00000010192	TRNT1	64	61.776	Taeniopygia_guttata
ENSSLDG00000016463	-	91	82.845	ENSTRUG00000001088	trnt1	56	82.845	Takifugu_rubripes
ENSSLDG00000016463	-	91	83.264	ENSTNIG00000007363	trnt1	56	82.988	Tetraodon_nigroviridis
ENSSLDG00000016463	-	58	51.634	ENSTBEG00000006367	TRNT1	51	51.613	Tupaia_belangeri
ENSSLDG00000016463	-	91	63.598	ENSTTRG00000007803	TRNT1	56	63.485	Tursiops_truncatus
ENSSLDG00000016463	-	91	64.435	ENSUAMG00000022574	TRNT1	55	64.435	Ursus_americanus
ENSSLDG00000016463	-	91	64.435	ENSUMAG00000024092	TRNT1	55	64.435	Ursus_maritimus
ENSSLDG00000016463	-	57	71.053	ENSVPAG00000008096	-	68	73.203	Vicugna_pacos
ENSSLDG00000016463	-	91	64.435	ENSVVUG00000012810	TRNT1	59	64.315	Vulpes_vulpes
ENSSLDG00000016463	-	91	58.996	ENSXETG00000025091	trnt1	60	58.921	Xenopus_tropicalis
ENSSLDG00000016463	-	91	81.590	ENSXCOG00000010150	trnt1	57	81.328	Xiphophorus_couchianus
ENSSLDG00000016463	-	91	82.008	ENSXMAG00000002227	trnt1	57	81.743	Xiphophorus_maculatus