EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000016505 (Gene tree)
Gene ID: -
Gene Symbol: larp1
Alias: wu:fb92d03|wu:fd15e07
Full Name: La ribonucleoprotein domain family member 1
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 17846 bases
Position: chrPEQF01098981.1:462566-480411
Accession: 111659959
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000021140	La	PF05383.17	7.6e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000021838	-	2526	XM_023413055	ENSSLDP00000021140	841 (aa)	XP_023268823	-

Gene Model

Click here to download ENSSLDG00000016505's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000016505's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000016505	larp1	83	59.437	ENSSLDG00000014613	larp1b	73	57.909

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000016505	larp1	95	70.513	ENSG00000155506	LARP1	89	80.864	Homo_sapiens
ENSSLDG00000016505	larp1	87	95.023	ENSAPOG00000020685	larp1	79	95.023	Acanthochromis_polyacanthus
ENSSLDG00000016505	larp1	95	70.616	ENSAMEG00000016673	LARP1	92	69.570	Ailuropoda_melanoleuca
ENSSLDG00000016505	larp1	99	83.834	ENSACIG00000012994	larp1	82	83.199	Amphilophus_citrinellus
ENSSLDG00000016505	larp1	94	91.310	ENSAOCG00000007792	larp1	96	91.098	Amphiprion_ocellaris
ENSSLDG00000016505	larp1	99	88.155	ENSAPEG00000022246	larp1	84	88.269	Amphiprion_percula
ENSSLDG00000016505	larp1	98	86.127	ENSATEG00000013523	larp1	82	87.995	Anabas_testudineus
ENSSLDG00000016505	larp1	85	78.846	ENSAPLG00000007559	LARP1	92	72.904	Anas_platyrhynchos
ENSSLDG00000016505	larp1	97	70.776	ENSACAG00000004071	LARP1	97	70.776	Anolis_carolinensis
ENSSLDG00000016505	larp1	95	70.405	ENSANAG00000029949	LARP1	92	66.293	Aotus_nancymaae
ENSSLDG00000016505	larp1	99	90.292	ENSACLG00000015256	larp1	91	86.222	Astatotilapia_calliptera
ENSSLDG00000016505	larp1	95	80.238	ENSAMXG00000000859	larp1	80	80.238	Astyanax_mexicanus
ENSSLDG00000016505	larp1	94	71.009	ENSBTAG00000008443	LARP1	79	69.728	Bos_taurus
ENSSLDG00000016505	larp1	95	70.405	ENSCJAG00000004454	LARP1	86	69.369	Callithrix_jacchus
ENSSLDG00000016505	larp1	95	70.267	ENSCAFG00000017639	LARP1	92	69.231	Canis_familiaris
ENSSLDG00000016505	larp1	95	70.267	ENSCAFG00020023860	LARP1	98	69.231	Canis_lupus_dingo
ENSSLDG00000016505	larp1	94	70.775	ENSCHIG00000014414	LARP1	81	66.667	Capra_hircus
ENSSLDG00000016505	larp1	97	69.467	ENSTSYG00000013732	LARP1	79	75.679	Carlito_syrichta
ENSSLDG00000016505	larp1	90	68.811	ENSCAPG00000013865	LARP1	83	68.727	Cavia_aperea
ENSSLDG00000016505	larp1	95	70.255	ENSCPOG00000003377	LARP1	92	69.144	Cavia_porcellus
ENSSLDG00000016505	larp1	95	70.405	ENSCCAG00000025201	LARP1	86	69.066	Cebus_capucinus
ENSSLDG00000016505	larp1	94	70.892	ENSCATG00000030675	LARP1	86	69.048	Cercocebus_atys
ENSSLDG00000016505	larp1	97	69.595	ENSCLAG00000012755	LARP1	91	67.418	Chinchilla_lanigera
ENSSLDG00000016505	larp1	94	69.268	ENSCSAG00000010800	LARP1	85	75.339	Chlorocebus_sabaeus
ENSSLDG00000016505	larp1	80	67.057	ENSCHOG00000012716	LARP1	68	67.057	Choloepus_hoffmanni
ENSSLDG00000016505	larp1	94	75.000	ENSCPBG00000002173	LARP1	85	73.721	Chrysemys_picta_bellii
ENSSLDG00000016505	larp1	94	70.595	ENSCANG00000037418	LARP1	86	69.074	Colobus_angolensis_palliatus
ENSSLDG00000016505	larp1	97	69.752	ENSCGRG00001016913	Larp1	82	69.526	Cricetulus_griseus_chok1gshd
ENSSLDG00000016505	larp1	84	74.583	ENSCGRG00000009916	Larp1	77	75.035	Cricetulus_griseus_crigri
ENSSLDG00000016505	larp1	99	84.821	ENSCSEG00000016431	larp1	83	84.933	Cynoglossus_semilaevis
ENSSLDG00000016505	larp1	98	83.867	ENSCVAG00000022687	larp1	83	84.099	Cyprinodon_variegatus
ENSSLDG00000016505	larp1	98	73.526	ENSDARG00000101722	larp1	88	73.642	Danio_rerio
ENSSLDG00000016505	larp1	97	69.762	ENSDNOG00000012073	LARP1	80	69.536	Dasypus_novemcinctus
ENSSLDG00000016505	larp1	97	68.000	ENSDORG00000002897	Larp1	78	75.067	Dipodomys_ordii
ENSSLDG00000016505	larp1	90	70.366	ENSETEG00000020251	LARP1	81	77.063	Echinops_telfairi
ENSSLDG00000016505	larp1	95	71.693	ENSEASG00005001070	LARP1	80	69.118	Equus_asinus_asinus
ENSSLDG00000016505	larp1	95	71.693	ENSECAG00000017002	LARP1	64	69.074	Equus_caballus
ENSSLDG00000016505	larp1	88	72.655	ENSEEUG00000001065	LARP1	83	71.356	Erinaceus_europaeus
ENSSLDG00000016505	larp1	98	79.299	ENSELUG00000019403	larp1	82	79.638	Esox_lucius
ENSSLDG00000016505	larp1	95	70.616	ENSFCAG00000000592	LARP1	87	67.610	Felis_catus
ENSSLDG00000016505	larp1	94	76.065	ENSFALG00000008335	LARP1	96	74.060	Ficedula_albicollis
ENSSLDG00000016505	larp1	94	70.499	ENSFDAG00000021125	LARP1	92	69.032	Fukomys_damarensis
ENSSLDG00000016505	larp1	53	78.826	ENSFHEG00000020307	larp1	92	81.065	Fundulus_heteroclitus
ENSSLDG00000016505	larp1	98	71.364	ENSGALG00000040109	LARP1	88	70.602	Gallus_gallus
ENSSLDG00000016505	larp1	94	74.761	ENSGAGG00000025113	LARP1	94	73.888	Gopherus_agassizii
ENSSLDG00000016505	larp1	95	70.513	ENSGGOG00000006048	LARP1	86	69.161	Gorilla_gorilla
ENSSLDG00000016505	larp1	100	90.845	ENSHBUG00000020762	larp1	100	90.845	Haplochromis_burtoni
ENSSLDG00000016505	larp1	92	74.589	ENSHGLG00000006267	LARP1	72	74.336	Heterocephalus_glaber_female
ENSSLDG00000016505	larp1	79	67.548	ENSHGLG00100003395	-	80	59.540	Heterocephalus_glaber_male
ENSSLDG00000016505	larp1	91	75.096	ENSHGLG00100014230	-	81	74.840	Heterocephalus_glaber_male
ENSSLDG00000016505	larp1	87	93.447	ENSHCOG00000010786	larp1	80	93.447	Hippocampus_comes
ENSSLDG00000016505	larp1	95	73.846	ENSIPUG00000019105	Larp1	85	75.503	Ictalurus_punctatus
ENSSLDG00000016505	larp1	83	76.773	ENSSTOG00000005678	LARP1	79	75.168	Ictidomys_tridecemlineatus
ENSSLDG00000016505	larp1	95	64.692	ENSJJAG00000016950	Larp1	82	63.688	Jaculus_jaculus
ENSSLDG00000016505	larp1	99	87.617	ENSKMAG00000018468	larp1	91	84.512	Kryptolebias_marmoratus
ENSSLDG00000016505	larp1	98	87.224	ENSLBEG00000027172	larp1	82	87.358	Labrus_bergylta
ENSSLDG00000016505	larp1	91	80.099	ENSLOCG00000012457	larp1	84	80.099	Lepisosteus_oculatus
ENSSLDG00000016505	larp1	97	67.950	ENSLAFG00000008991	LARP1	81	67.873	Loxodonta_africana
ENSSLDG00000016505	larp1	94	70.892	ENSMFAG00000031651	LARP1	86	69.048	Macaca_fascicularis
ENSSLDG00000016505	larp1	83	77.010	ENSMMUG00000009411	LARP1	99	58.553	Macaca_mulatta
ENSSLDG00000016505	larp1	94	70.892	ENSMNEG00000039294	LARP1	98	69.161	Macaca_nemestrina
ENSSLDG00000016505	larp1	94	70.892	ENSMLEG00000035142	LARP1	86	69.048	Mandrillus_leucophaeus
ENSSLDG00000016505	larp1	99	85.731	ENSMAMG00000021788	larp1	84	86.203	Mastacembelus_armatus
ENSSLDG00000016505	larp1	99	86.111	ENSMZEG00005009345	larp1	91	86.222	Maylandia_zebra
ENSSLDG00000016505	larp1	98	71.836	ENSMGAG00000005696	LARP1	92	70.011	Meleagris_gallopavo
ENSSLDG00000016505	larp1	97	69.639	ENSMAUG00000001385	Larp1	82	69.413	Mesocricetus_auratus
ENSSLDG00000016505	larp1	94	72.229	ENSMICG00000000837	LARP1	98	70.167	Microcebus_murinus
ENSSLDG00000016505	larp1	97	69.752	ENSMOCG00000008920	Larp1	82	69.526	Microtus_ochrogaster
ENSSLDG00000016505	larp1	92	72.919	ENSMMOG00000013364	larp1	77	75.935	Mola_mola
ENSSLDG00000016505	larp1	97	70.990	ENSMODG00000008663	LARP1	91	70.990	Monodelphis_domestica
ENSSLDG00000016505	larp1	99	85.955	ENSMALG00000017180	larp1	95	82.919	Monopterus_albus
ENSSLDG00000016505	larp1	97	69.335	MGP_CAROLIEiJ_G0016383	Larp1	82	69.109	Mus_caroli
ENSSLDG00000016505	larp1	97	69.448	ENSMUSG00000037331	Larp1	82	69.222	Mus_musculus
ENSSLDG00000016505	larp1	97	69.560	MGP_PahariEiJ_G0017518	Larp1	81	69.335	Mus_pahari
ENSSLDG00000016505	larp1	97	69.448	MGP_SPRETEiJ_G0017225	Larp1	82	69.222	Mus_spretus
ENSSLDG00000016505	larp1	75	68.353	ENSMPUG00000013564	LARP1	76	67.532	Mustela_putorius_furo
ENSSLDG00000016505	larp1	97	65.878	ENSMLUG00000002608	LARP1	92	65.766	Myotis_lucifugus
ENSSLDG00000016505	larp1	97	68.706	ENSNGAG00000001098	Larp1	79	75.848	Nannospalax_galili
ENSSLDG00000016505	larp1	95	86.635	ENSNBRG00000008963	larp1	85	86.754	Neolamprologus_brichardi
ENSSLDG00000016505	larp1	95	70.334	ENSNLEG00000016588	LARP1	90	68.692	Nomascus_leucogenys
ENSSLDG00000016505	larp1	97	68.750	ENSMEUG00000002957	LARP1	91	68.750	Notamacropus_eugenii
ENSSLDG00000016505	larp1	95	70.035	ENSOPRG00000013014	LARP1	81	74.903	Ochotona_princeps
ENSSLDG00000016505	larp1	95	70.267	ENSODEG00000010824	LARP1	81	75.193	Octodon_degus
ENSSLDG00000016505	larp1	99	85.538	ENSONIG00000017308	larp1	82	86.226	Oreochromis_niloticus
ENSSLDG00000016505	larp1	99	69.546	ENSOANG00000005096	LARP1	91	70.210	Ornithorhynchus_anatinus
ENSSLDG00000016505	larp1	97	69.101	ENSOCUG00000013066	LARP1	81	69.257	Oryctolagus_cuniculus
ENSSLDG00000016505	larp1	94	86.582	ENSORLG00000000824	larp1	94	86.582	Oryzias_latipes
ENSSLDG00000016505	larp1	99	81.481	ENSORLG00020022241	larp1	83	81.481	Oryzias_latipes_hni
ENSSLDG00000016505	larp1	99	81.257	ENSORLG00015007538	larp1	83	81.257	Oryzias_latipes_hsok
ENSSLDG00000016505	larp1	99	80.112	ENSOMEG00000003134	larp1	83	81.033	Oryzias_melastigma
ENSSLDG00000016505	larp1	97	69.083	ENSOGAG00000016750	LARP1	92	69.005	Otolemur_garnettii
ENSSLDG00000016505	larp1	94	69.213	ENSOARG00000009893	LARP1	92	66.890	Ovis_aries
ENSSLDG00000016505	larp1	95	70.513	ENSPPAG00000042993	LARP1	86	69.161	Pan_paniscus
ENSSLDG00000016505	larp1	95	69.061	ENSPPRG00000009780	LARP1	86	67.497	Panthera_pardus
ENSSLDG00000016505	larp1	95	69.302	ENSPTIG00000007013	LARP1	86	68.063	Panthera_tigris_altaica
ENSSLDG00000016505	larp1	95	70.513	ENSPTRG00000017447	LARP1	86	69.161	Pan_troglodytes
ENSSLDG00000016505	larp1	94	70.892	ENSPANG00000008080	LARP1	86	69.048	Papio_anubis
ENSSLDG00000016505	larp1	97	74.313	ENSPKIG00000017153	-	81	74.224	Paramormyrops_kingsleyae
ENSSLDG00000016505	larp1	98	78.596	ENSPKIG00000010096	larp1	82	79.771	Paramormyrops_kingsleyae
ENSSLDG00000016505	larp1	91	81.491	ENSPMGG00000011599	larp1	82	82.360	Periophthalmus_magnuspinnatus
ENSSLDG00000016505	larp1	97	68.464	ENSPEMG00000022523	Larp1	79	75.304	Peromyscus_maniculatus_bairdii
ENSSLDG00000016505	larp1	97	71.377	ENSPCIG00000019242	LARP1	71	73.223	Phascolarctos_cinereus
ENSSLDG00000016505	larp1	99	80.692	ENSPFOG00000005836	larp1	81	82.063	Poecilia_formosa
ENSSLDG00000016505	larp1	99	80.246	ENSPLAG00000008936	larp1	83	81.839	Poecilia_latipinna
ENSSLDG00000016505	larp1	99	80.942	ENSPMEG00000013656	larp1	81	81.502	Poecilia_mexicana
ENSSLDG00000016505	larp1	99	80.381	ENSPREG00000005726	larp1	91	81.614	Poecilia_reticulata
ENSSLDG00000016505	larp1	95	67.986	ENSPCAG00000006407	LARP1	79	73.705	Procavia_capensis
ENSSLDG00000016505	larp1	95	61.938	ENSPCOG00000016949	LARP1	91	64.198	Propithecus_coquereli
ENSSLDG00000016505	larp1	95	70.418	ENSPVAG00000002262	LARP1	79	69.266	Pteropus_vampyrus
ENSSLDG00000016505	larp1	99	86.111	ENSPNYG00000007938	larp1	91	86.222	Pundamilia_nyererei
ENSSLDG00000016505	larp1	97	76.860	ENSPNAG00000021427	larp1	83	79.186	Pygocentrus_nattereri
ENSSLDG00000016505	larp1	97	68.464	ENSRNOG00000031544	Larp1	79	75.304	Rattus_norvegicus
ENSSLDG00000016505	larp1	94	70.457	ENSRBIG00000038005	LARP1	86	69.048	Rhinopithecus_bieti
ENSSLDG00000016505	larp1	95	70.198	ENSRROG00000034073	LARP1	98	69.161	Rhinopithecus_roxellana
ENSSLDG00000016505	larp1	95	70.629	ENSSBOG00000019816	LARP1	87	69.274	Saimiri_boliviensis_boliviensis
ENSSLDG00000016505	larp1	97	71.445	ENSSHAG00000011115	LARP1	91	72.133	Sarcophilus_harrisii
ENSSLDG00000016505	larp1	96	77.568	ENSSFOG00015018058	-	80	77.804	Scleropages_formosus
ENSSLDG00000016505	larp1	97	75.056	ENSSFOG00015020304	larp1	87	75.561	Scleropages_formosus
ENSSLDG00000016505	larp1	91	84.682	ENSSMAG00000007468	larp1	78	86.550	Scophthalmus_maximus
ENSSLDG00000016505	larp1	100	99.524	ENSSDUG00000000268	larp1	100	99.524	Seriola_dumerili
ENSSLDG00000016505	larp1	67	84.211	ENSSARG00000013907	-	87	79.348	Sorex_araneus
ENSSLDG00000016505	larp1	97	72.358	ENSSPUG00000012179	-	78	72.474	Sphenodon_punctatus
ENSSLDG00000016505	larp1	99	86.379	ENSSPAG00000003910	larp1	83	86.711	Stegastes_partitus
ENSSLDG00000016505	larp1	89	75.885	ENSSSCG00000017069	LARP1	87	74.427	Sus_scrofa
ENSSLDG00000016505	larp1	94	71.948	ENSTGUG00000000704	LARP1	93	71.948	Taeniopygia_guttata
ENSSLDG00000016505	larp1	99	84.554	ENSTRUG00000009470	larp1	82	84.555	Takifugu_rubripes
ENSSLDG00000016505	larp1	84	75.800	ENSTBEG00000003381	LARP1	80	75.522	Tupaia_belangeri
ENSSLDG00000016505	larp1	99	68.000	ENSTTRG00000015934	LARP1	93	68.479	Tursiops_truncatus
ENSSLDG00000016505	larp1	95	70.267	ENSUAMG00000019334	LARP1	79	69.231	Ursus_americanus
ENSSLDG00000016505	larp1	95	68.023	ENSUMAG00000002934	LARP1	89	70.347	Ursus_maritimus
ENSSLDG00000016505	larp1	95	70.267	ENSVVUG00000004644	LARP1	98	69.231	Vulpes_vulpes
ENSSLDG00000016505	larp1	97	71.478	ENSXETG00000008413	larp1	83	72.813	Xenopus_tropicalis
ENSSLDG00000016505	larp1	88	84.832	ENSXCOG00000004022	larp1	81	84.812	Xiphophorus_couchianus
ENSSLDG00000016505	larp1	99	80.381	ENSXMAG00000018780	larp1	81	81.278	Xiphophorus_maculatus