EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSLDG00000016788 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: C2orf8|MGC2454
Full Name: THUMP domain containing 2
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 6497 bases
Position: chrPEQF01099035.1:516029-522525
Accession: 111661995
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000021487	THUMP	PF02926.17	2.8e-06	1	1
ENSSLDP00000021487	MTS	PF05175.14	1.6e-06	1	1
ENSSLDP00000021487	UPF0020	PF01170.18	1.5e-28	1	1
ENSSLDP00000021487	Methyltransf_31	PF13847.6	3.6e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000022197	-	2784	XM_023415719	ENSSLDP00000021487	601 (aa)	XP_023271487	UPI000C6FA657

Gene Model

Click here to download ENSSLDG00000016788's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000016788's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000016788	-	80	40.968	ENSG00000138050	THUMPD2	77	44.118	Homo_sapiens
ENSSLDG00000016788	-	99	60.596	ENSAPOG00000001802	-	99	60.992	Acanthochromis_polyacanthus
ENSSLDG00000016788	-	51	51.675	ENSAMEG00000008664	THUMPD2	65	51.675	Ailuropoda_melanoleuca
ENSSLDG00000016788	-	51	74.390	ENSACIG00000011677	THUMPD2	70	74.390	Amphilophus_citrinellus
ENSSLDG00000016788	-	99	62.126	ENSAOCG00000000927	THUMPD2	99	62.706	Amphiprion_ocellaris
ENSSLDG00000016788	-	99	61.794	ENSAPEG00000000981	thumpd2	99	62.376	Amphiprion_percula
ENSSLDG00000016788	-	99	62.986	ENSATEG00000012329	thumpd2	99	62.986	Anabas_testudineus
ENSSLDG00000016788	-	77	44.728	ENSAPLG00000008775	THUMPD2	80	44.728	Anas_platyrhynchos
ENSSLDG00000016788	-	64	42.857	ENSACAG00000000538	THUMPD2	78	42.857	Anolis_carolinensis
ENSSLDG00000016788	-	80	41.479	ENSANAG00000034298	THUMPD2	78	41.479	Aotus_nancymaae
ENSSLDG00000016788	-	82	73.519	ENSACLG00000025840	thumpd2	94	73.519	Astatotilapia_calliptera
ENSSLDG00000016788	-	76	44.805	ENSAMXG00000011080	thumpd2	92	45.946	Astyanax_mexicanus
ENSSLDG00000016788	-	68	42.857	ENSBTAG00000004722	THUMPD2	78	42.857	Bos_taurus
ENSSLDG00000016788	-	60	51.196	ENSCJAG00000014891	THUMPD2	60	51.196	Callithrix_jacchus
ENSSLDG00000016788	-	72	41.479	ENSCAFG00000006471	THUMPD2	83	41.479	Canis_familiaris
ENSSLDG00000016788	-	70	41.479	ENSCAFG00020021695	THUMPD2	85	41.479	Canis_lupus_dingo
ENSSLDG00000016788	-	69	42.903	ENSCHIG00000013921	THUMPD2	80	42.903	Capra_hircus
ENSSLDG00000016788	-	79	40.938	ENSCPOG00000003368	THUMPD2	83	40.938	Cavia_porcellus
ENSSLDG00000016788	-	80	40.312	ENSCCAG00000034405	THUMPD2	78	40.312	Cebus_capucinus
ENSSLDG00000016788	-	77	39.062	ENSCATG00000012396	THUMPD2	78	39.062	Cercocebus_atys
ENSSLDG00000016788	-	72	50.718	ENSCLAG00000003029	THUMPD2	78	35.714	Chinchilla_lanigera
ENSSLDG00000016788	-	51	39.375	ENSCSAG00000012431	THUMPD2	71	39.375	Chlorocebus_sabaeus
ENSSLDG00000016788	-	98	34.570	ENSCPBG00000018272	THUMPD2	94	34.401	Chrysemys_picta_bellii
ENSSLDG00000016788	-	77	40.000	ENSCANG00000032596	THUMPD2	79	40.000	Colobus_angolensis_palliatus
ENSSLDG00000016788	-	74	42.532	ENSCGRG00001009939	Thumpd2	74	42.532	Cricetulus_griseus_chok1gshd
ENSSLDG00000016788	-	51	42.532	ENSCGRG00000006284	Thumpd2	62	42.532	Cricetulus_griseus_crigri
ENSSLDG00000016788	-	57	47.536	ENSCSEG00000000512	-	95	47.688	Cynoglossus_semilaevis
ENSSLDG00000016788	-	87	50.286	ENSCVAG00000007942	THUMPD2	99	50.476	Cyprinodon_variegatus
ENSSLDG00000016788	-	69	47.896	ENSDARG00000093070	thumpd2	87	47.896	Danio_rerio
ENSSLDG00000016788	-	60	50.239	ENSDNOG00000019834	THUMPD2	78	39.241	Dasypus_novemcinctus
ENSSLDG00000016788	-	69	36.334	ENSETEG00000001300	THUMPD2	79	36.334	Echinops_telfairi
ENSSLDG00000016788	-	75	39.432	ENSEASG00005005106	THUMPD2	76	39.936	Equus_asinus_asinus
ENSSLDG00000016788	-	75	39.117	ENSECAG00000010799	THUMPD2	76	41.100	Equus_caballus
ENSSLDG00000016788	-	56	52.632	ENSEEUG00000000105	THUMPD2	67	52.632	Erinaceus_europaeus
ENSSLDG00000016788	-	70	54.516	ENSELUG00000003735	thumpd2	77	54.516	Esox_lucius
ENSSLDG00000016788	-	68	42.587	ENSFCAG00000006809	THUMPD2	78	42.587	Felis_catus
ENSSLDG00000016788	-	71	45.513	ENSFALG00000008655	THUMPD2	56	45.955	Ficedula_albicollis
ENSSLDG00000016788	-	98	57.119	ENSFHEG00000011402	thumpd2	97	57.119	Fundulus_heteroclitus
ENSSLDG00000016788	-	57	39.943	ENSGALG00000009119	THUMPD2	80	39.943	Gallus_gallus
ENSSLDG00000016788	-	99	55.556	ENSGAFG00000012683	thumpd2	99	55.556	Gambusia_affinis
ENSSLDG00000016788	-	51	36.943	ENSGAGG00000001325	THUMPD2	73	36.943	Gopherus_agassizii
ENSSLDG00000016788	-	80	41.290	ENSGGOG00000001608	THUMPD2	78	41.290	Gorilla_gorilla
ENSSLDG00000016788	-	82	57.722	ENSHBUG00000011780	-	98	58.398	Haplochromis_burtoni
ENSSLDG00000016788	-	80	40.938	ENSHGLG00000019145	THUMPD2	78	40.938	Heterocephalus_glaber_female
ENSSLDG00000016788	-	74	46.763	ENSIPUG00000015283	thumpd2	96	43.226	Ictalurus_punctatus
ENSSLDG00000016788	-	81	41.640	ENSSTOG00000027472	THUMPD2	80	41.640	Ictidomys_tridecemlineatus
ENSSLDG00000016788	-	51	40.256	ENSJJAG00000020374	Thumpd2	63	40.256	Jaculus_jaculus
ENSSLDG00000016788	-	99	61.912	ENSLBEG00000007585	THUMPD2	100	62.602	Labrus_bergylta
ENSSLDG00000016788	-	68	51.780	ENSLOCG00000015747	THUMPD2	93	61.333	Lepisosteus_oculatus
ENSSLDG00000016788	-	54	55.914	ENSLAFG00000005383	-	95	55.914	Loxodonta_africana
ENSSLDG00000016788	-	77	39.375	ENSMFAG00000031464	THUMPD2	78	39.375	Macaca_fascicularis
ENSSLDG00000016788	-	77	39.375	ENSMMUG00000011841	THUMPD2	78	39.375	Macaca_mulatta
ENSSLDG00000016788	-	77	39.375	ENSMNEG00000037438	THUMPD2	78	39.375	Macaca_nemestrina
ENSSLDG00000016788	-	72	39.062	ENSMLEG00000031490	THUMPD2	79	39.062	Mandrillus_leucophaeus
ENSSLDG00000016788	-	62	78.814	ENSMAMG00000022090	thumpd2	84	78.814	Mastacembelus_armatus
ENSSLDG00000016788	-	99	60.960	ENSMZEG00005027354	-	99	61.874	Maylandia_zebra
ENSSLDG00000016788	-	72	40.449	ENSMGAG00000007605	THUMPD2	88	40.510	Meleagris_gallopavo
ENSSLDG00000016788	-	80	42.453	ENSMAUG00000012866	Thumpd2	91	42.453	Mesocricetus_auratus
ENSSLDG00000016788	-	80	41.935	ENSMICG00000008042	THUMPD2	79	42.258	Microcebus_murinus
ENSSLDG00000016788	-	82	39.437	ENSMOCG00000018094	Thumpd2	81	39.437	Microtus_ochrogaster
ENSSLDG00000016788	-	70	70.695	ENSMMOG00000007356	thumpd2	99	70.695	Mola_mola
ENSSLDG00000016788	-	51	40.836	ENSMODG00000009129	THUMPD2	65	40.836	Monodelphis_domestica
ENSSLDG00000016788	-	72	68.061	ENSMALG00000020471	thumpd2	99	68.182	Monopterus_albus
ENSSLDG00000016788	-	75	40.058	MGP_CAROLIEiJ_G0021912	Thumpd2	82	40.058	Mus_caroli
ENSSLDG00000016788	-	79	41.250	ENSMUSG00000024246	Thumpd2	76	41.250	Mus_musculus
ENSSLDG00000016788	-	68	42.222	MGP_PahariEiJ_G0020902	Thumpd2	74	42.222	Mus_pahari
ENSSLDG00000016788	-	53	52.153	MGP_SPRETEiJ_G0022828	Thumpd2	60	52.153	Mus_spretus
ENSSLDG00000016788	-	51	50.718	ENSMPUG00000010563	THUMPD2	78	41.558	Mustela_putorius_furo
ENSSLDG00000016788	-	81	41.456	ENSMLUG00000009688	THUMPD2	95	41.456	Myotis_lucifugus
ENSSLDG00000016788	-	68	44.373	ENSNGAG00000016396	Thumpd2	76	44.373	Nannospalax_galili
ENSSLDG00000016788	-	80	39.375	ENSNLEG00000016562	THUMPD2	78	39.604	Nomascus_leucogenys
ENSSLDG00000016788	-	66	40.514	ENSMEUG00000014815	THUMPD2	82	40.514	Notamacropus_eugenii
ENSSLDG00000016788	-	72	36.538	ENSOPRG00000013478	THUMPD2	94	36.538	Ochotona_princeps
ENSSLDG00000016788	-	70	76.271	ENSONIG00000001165	thumpd2	100	54.127	Oreochromis_niloticus
ENSSLDG00000016788	-	61	50.235	ENSOCUG00000003257	THUMPD2	74	49.000	Oryctolagus_cuniculus
ENSSLDG00000016788	-	99	50.751	ENSORLG00000002138	thumpd2	99	51.085	Oryzias_latipes
ENSSLDG00000016788	-	86	49.807	ENSORLG00020018792	thumpd2	98	49.808	Oryzias_latipes_hni
ENSSLDG00000016788	-	99	50.083	ENSORLG00015005237	thumpd2	99	50.918	Oryzias_latipes_hsok
ENSSLDG00000016788	-	73	55.219	ENSOMEG00000023563	thumpd2	94	60.236	Oryzias_melastigma
ENSSLDG00000016788	-	72	41.883	ENSOGAG00000010890	THUMPD2	92	41.883	Otolemur_garnettii
ENSSLDG00000016788	-	68	40.323	ENSOARG00000007841	THUMPD2	78	40.323	Ovis_aries
ENSSLDG00000016788	-	81	40.968	ENSPPAG00000033850	THUMPD2	80	40.968	Pan_paniscus
ENSSLDG00000016788	-	68	41.745	ENSPPRG00000003874	THUMPD2	78	41.745	Panthera_pardus
ENSSLDG00000016788	-	63	41.745	ENSPTIG00000004118	THUMPD2	76	41.745	Panthera_tigris_altaica
ENSSLDG00000016788	-	80	40.968	ENSPTRG00000011860	THUMPD2	78	40.968	Pan_troglodytes
ENSSLDG00000016788	-	77	38.750	ENSPANG00000004807	THUMPD2	78	39.604	Papio_anubis
ENSSLDG00000016788	-	73	50.482	ENSPKIG00000022207	THUMPD2	82	50.161	Paramormyrops_kingsleyae
ENSSLDG00000016788	-	67	42.433	ENSPSIG00000003159	THUMPD2	85	42.433	Pelodiscus_sinensis
ENSSLDG00000016788	-	94	39.377	ENSPEMG00000009015	Thumpd2	92	39.377	Peromyscus_maniculatus_bairdii
ENSSLDG00000016788	-	52	44.340	ENSPCIG00000022621	THUMPD2	59	44.340	Phascolarctos_cinereus
ENSSLDG00000016788	-	76	68.212	ENSPFOG00000006461	thumpd2	97	65.584	Poecilia_formosa
ENSSLDG00000016788	-	71	66.964	ENSPLAG00000010700	THUMPD2	93	66.964	Poecilia_latipinna
ENSSLDG00000016788	-	71	69.643	ENSPMEG00000009573	-	93	69.643	Poecilia_mexicana
ENSSLDG00000016788	-	71	65.831	ENSPREG00000001603	THUMPD2	97	65.831	Poecilia_reticulata
ENSSLDG00000016788	-	74	41.401	ENSPPYG00000012470	THUMPD2	80	41.401	Pongo_abelii
ENSSLDG00000016788	-	51	37.736	ENSPCAG00000007326	THUMPD2	64	37.736	Procavia_capensis
ENSSLDG00000016788	-	80	41.875	ENSPCOG00000000396	-	79	41.875	Propithecus_coquereli
ENSSLDG00000016788	-	71	36.562	ENSPCOG00000028456	-	87	36.562	Propithecus_coquereli
ENSSLDG00000016788	-	58	49.282	ENSPVAG00000008101	THUMPD2	61	49.282	Pteropus_vampyrus
ENSSLDG00000016788	-	76	69.636	ENSPNYG00000009804	THUMPD2	95	69.636	Pundamilia_nyererei
ENSSLDG00000016788	-	78	49.837	ENSPNAG00000023224	thumpd2	88	50.476	Pygocentrus_nattereri
ENSSLDG00000016788	-	68	40.584	ENSRNOG00000008291	Thumpd2	66	48.731	Rattus_norvegicus
ENSSLDG00000016788	-	68	39.688	ENSRBIG00000034978	THUMPD2	84	39.688	Rhinopithecus_bieti
ENSSLDG00000016788	-	74	39.688	ENSRROG00000031707	THUMPD2	79	39.688	Rhinopithecus_roxellana
ENSSLDG00000016788	-	62	51.196	ENSSBOG00000015419	THUMPD2	62	51.196	Saimiri_boliviensis_boliviensis
ENSSLDG00000016788	-	50	52.358	ENSSHAG00000010785	THUMPD2	62	52.358	Sarcophilus_harrisii
ENSSLDG00000016788	-	57	57.812	ENSSFOG00015006959	THUMPD2	90	57.812	Scleropages_formosus
ENSSLDG00000016788	-	74	68.560	ENSSMAG00000019604	-	82	68.154	Scophthalmus_maximus
ENSSLDG00000016788	-	99	98.000	ENSSDUG00000019898	THUMPD2	99	98.000	Seriola_dumerili
ENSSLDG00000016788	-	58	39.118	ENSSPUG00000006316	THUMPD2	82	39.118	Sphenodon_punctatus
ENSSLDG00000016788	-	69	42.357	ENSSSCG00000008470	THUMPD2	78	42.857	Sus_scrofa
ENSSLDG00000016788	-	56	54.245	ENSTGUG00000012782	THUMPD2	83	54.245	Taeniopygia_guttata
ENSSLDG00000016788	-	99	53.156	ENSTRUG00000022712	THUMPD2	99	52.990	Takifugu_rubripes
ENSSLDG00000016788	-	50	62.500	ENSTNIG00000009817	-	99	62.500	Tetraodon_nigroviridis
ENSSLDG00000016788	-	79	43.730	ENSTTRG00000005603	THUMPD2	80	43.730	Tursiops_truncatus
ENSSLDG00000016788	-	60	51.196	ENSUAMG00000011048	THUMPD2	64	51.196	Ursus_americanus
ENSSLDG00000016788	-	61	51.196	ENSUMAG00000013316	THUMPD2	72	52.174	Ursus_maritimus
ENSSLDG00000016788	-	55	53.763	ENSVPAG00000007570	THUMPD2	67	53.763	Vicugna_pacos
ENSSLDG00000016788	-	70	41.290	ENSVVUG00000018628	THUMPD2	85	41.290	Vulpes_vulpes
ENSSLDG00000016788	-	58	47.431	ENSXETG00000018494	thumpd2	75	47.431	Xenopus_tropicalis
ENSSLDG00000016788	-	76	68.056	ENSXCOG00000013456	-	99	68.056	Xiphophorus_couchianus
ENSSLDG00000016788	-	99	55.853	ENSXMAG00000017249	thumpd2	98	55.853	Xiphophorus_maculatus