EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSLDG00000016832 (Gene tree)
Gene ID
-
Gene Symbol
MSI1
Alias
-
Full Name
musashi RNA binding protein 1
Gene Type
protein_coding
Species
Seriola_lalandi_dorsalis
Status
putative
Strand
Minus strand
Length
20487 bases
Position
chrPEQF01099422.1:3756702-3777188
Accession
111644938
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSLDP00000021592RRM_1PF00076.226e-3312
ENSSLDP00000021592RRM_1PF00076.226e-3322
ENSSLDP00000021572RRM_1PF00076.227.2e-3312
ENSSLDP00000021572RRM_1PF00076.227.2e-3322
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSLDT00000022283MSI1-2013009XM_023393918ENSSLDP00000021572349 (aa)XP_023249686UPI000BBE4A56
ENSSLDT00000022303MSI1-2022952-ENSSLDP00000021592330 (aa)-UPI000BBEE00B
Gene Model
Click here to download ENSSLDG00000016832's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000016832's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSLDG00000016832MSI19130.526ENSSLDG00000010845rbm388830.526
ENSSLDG00000016832MSI15739.683ENSSLDG00000018999HNRNPA35939.683
ENSSLDG00000016832MSI15234.177ENSSLDG00000012657rbm24a6236.047
ENSSLDG00000016832MSI19677.165ENSSLDG00000017172msi2a10071.601
ENSSLDG00000016832MSI15135.928ENSSLDG00000008689tardbp5534.940
ENSSLDG00000016832MSI15745.989ENSSLDG00000005199hnrnpaba8738.519
ENSSLDG00000016832MSI16044.724ENSSLDG00000015962hnrnpd7740.800
ENSSLDG00000016832MSI15239.655ENSSLDG00000024705-9039.512
ENSSLDG00000016832MSI110083.382ENSSLDG00000018706-10083.382
ENSSLDG00000016832MSI15140.323ENSSLDG00000024685-8740.323
ENSSLDG00000016832MSI15542.073ENSSLDG00000003718hnrnpa1a8038.690
ENSSLDG00000016832MSI15545.000ENSSLDG00000001911-8336.765
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSLDG00000016832MSI110084.254ENSG00000135097MSI19987.500Homo_sapiens
ENSSLDG00000016832MSI110099.427ENSAPOG00000023458-10099.427Acanthochromis_polyacanthus
ENSSLDG00000016832MSI110092.308ENSAPOG00000003191MSI110092.308Acanthochromis_polyacanthus
ENSSLDG00000016832MSI19468.508ENSAMEG00000013302MSI110068.232Ailuropoda_melanoleuca
ENSSLDG00000016832MSI19488.350ENSACIG00000017754-7890.615Amphilophus_citrinellus
ENSSLDG00000016832MSI19493.269ENSAOCG00000009031-9593.269Amphiprion_ocellaris
ENSSLDG00000016832MSI110092.308ENSAOCG00000003804MSI110092.308Amphiprion_ocellaris
ENSSLDG00000016832MSI110092.308ENSAPEG00000003245MSI110092.308Amphiprion_percula
ENSSLDG00000016832MSI110099.427ENSAPEG00000006857-8499.427Amphiprion_percula
ENSSLDG00000016832MSI110095.493ENSATEG00000017059MSI110095.493Anabas_testudineus
ENSSLDG00000016832MSI110084.225ENSATEG00000023779-10084.225Anabas_testudineus
ENSSLDG00000016832MSI110085.319ENSACAG00000002762MSI110085.042Anolis_carolinensis
ENSSLDG00000016832MSI110084.254ENSANAG00000027151MSI110084.254Aotus_nancymaae
ENSSLDG00000016832MSI18284.615ENSANAG00000027901-8884.615Aotus_nancymaae
ENSSLDG00000016832MSI110099.427ENSACLG00000000117-10099.695Astatotilapia_calliptera
ENSSLDG00000016832MSI110092.877ENSACLG00000011230MSI110092.877Astatotilapia_calliptera
ENSSLDG00000016832MSI19494.044ENSAMXG00000038960msi17694.044Astyanax_mexicanus
ENSSLDG00000016832MSI110084.254ENSBTAG00000009800MSI110086.957Bos_taurus
ENSSLDG00000016832MSI110084.254ENSCJAG00000008578MSI110086.997Callithrix_jacchus
ENSSLDG00000016832MSI110083.978ENSCAFG00000010283MSI110083.978Canis_familiaris
ENSSLDG00000016832MSI19485.852ENSCAFG00020020585MSI110085.852Canis_lupus_dingo
ENSSLDG00000016832MSI110082.016ENSCHIG00000024304MSI110082.016Capra_hircus
ENSSLDG00000016832MSI19485.015ENSTSYG00000033949MSI19585.015Carlito_syrichta
ENSSLDG00000016832MSI19480.586ENSCAPG00000003919MSI17884.982Cavia_aperea
ENSSLDG00000016832MSI19585.465ENSCPOG00000012361MSI110085.673Cavia_porcellus
ENSSLDG00000016832MSI110084.254ENSCCAG00000035567MSI110084.254Cebus_capucinus
ENSSLDG00000016832MSI110084.254ENSCATG00000030019MSI110084.254Cercocebus_atys
ENSSLDG00000016832MSI19485.673ENSCLAG00000011329MSI110085.673Chinchilla_lanigera
ENSSLDG00000016832MSI17488.934ENSCSAG00000002265MSI19684.116Chlorocebus_sabaeus
ENSSLDG00000016832MSI110087.749ENSCPBG00000011349MSI110087.749Chrysemys_picta_bellii
ENSSLDG00000016832MSI19485.061ENSCANG00000040651MSI110085.061Colobus_angolensis_palliatus
ENSSLDG00000016832MSI110084.254ENSCGRG00001018883Msi110084.254Cricetulus_griseus_chok1gshd
ENSSLDG00000016832MSI19485.106ENSCGRG00000002191Msi17285.106Cricetulus_griseus_crigri
ENSSLDG00000016832MSI110091.453ENSCSEG00000005834-10091.453Cynoglossus_semilaevis
ENSSLDG00000016832MSI110097.708ENSCSEG00000008352-10097.708Cynoglossus_semilaevis
ENSSLDG00000016832MSI19494.822ENSCSEG00000011032MSI110094.822Cynoglossus_semilaevis
ENSSLDG00000016832MSI110098.281ENSCVAG00000009100MSI110098.281Cyprinodon_variegatus
ENSSLDG00000016832MSI16274.312ENSCVAG00000017463-8974.312Cyprinodon_variegatus
ENSSLDG00000016832MSI15466.418ENSCVAG00000017430zgc:1107969466.418Cyprinodon_variegatus
ENSSLDG00000016832MSI19495.270ENSDARG00000010710msi110095.327Danio_rerio
ENSSLDG00000016832MSI17992.130ENSDARG00000102015CABZ01037298.19892.130Danio_rerio
ENSSLDG00000016832MSI19482.595ENSDNOG00000005713MSI19182.595Dasypus_novemcinctus
ENSSLDG00000016832MSI19484.431ENSDORG00000005610Msi19484.431Dipodomys_ordii
ENSSLDG00000016832MSI19481.707ENSETEG00000004756MSI110081.707Echinops_telfairi
ENSSLDG00000016832MSI110085.423ENSEASG00005004736MSI110085.423Equus_asinus_asinus
ENSSLDG00000016832MSI110084.254ENSECAG00000017526MSI110084.254Equus_caballus
ENSSLDG00000016832MSI19487.578ENSELUG00000023280-10087.267Esox_lucius
ENSSLDG00000016832MSI19690.476ENSELUG00000023219MSI19290.831Esox_lucius
ENSSLDG00000016832MSI110084.254ENSFCAG00000011007MSI110084.254Felis_catus
ENSSLDG00000016832MSI19489.667ENSFALG00000007574MSI110089.667Ficedula_albicollis
ENSSLDG00000016832MSI19484.756ENSFDAG00000019586MSI110084.756Fukomys_damarensis
ENSSLDG00000016832MSI110098.854ENSFHEG00000022446MSI110098.854Fundulus_heteroclitus
ENSSLDG00000016832MSI110092.308ENSFHEG00000003560-10092.308Fundulus_heteroclitus
ENSSLDG00000016832MSI110083.099ENSGMOG00000017838-10083.099Gadus_morhua
ENSSLDG00000016832MSI110095.415ENSGMOG00000001006MSI19995.129Gadus_morhua
ENSSLDG00000016832MSI19489.313ENSGALG00000007227MSI19876.882Gallus_gallus
ENSSLDG00000016832MSI110079.279ENSGAFG00000005860-10079.279Gambusia_affinis
ENSSLDG00000016832MSI19492.097ENSGAFG00000021522MSI19492.097Gambusia_affinis
ENSSLDG00000016832MSI110084.211ENSGACG00000008674-10084.211Gasterosteus_aculeatus
ENSSLDG00000016832MSI110098.281ENSGACG00000012679MSI110098.281Gasterosteus_aculeatus
ENSSLDG00000016832MSI110089.157ENSGAGG00000016037MSI110089.157Gopherus_agassizii
ENSSLDG00000016832MSI19485.669ENSGGOG00000010328MSI110085.669Gorilla_gorilla
ENSSLDG00000016832MSI110099.427ENSHBUG00000011841-10099.427Haplochromis_burtoni
ENSSLDG00000016832MSI110092.877ENSHBUG00000021921MSI110092.877Haplochromis_burtoni
ENSSLDG00000016832MSI110083.978ENSHGLG00000012782MSI110083.978Heterocephalus_glaber_female
ENSSLDG00000016832MSI19484.756ENSHGLG00100016848MSI110084.756Heterocephalus_glaber_male
ENSSLDG00000016832MSI110092.635ENSHCOG00000012067-10092.635Hippocampus_comes
ENSSLDG00000016832MSI19490.939ENSHCOG00000012019MSI110090.939Hippocampus_comes
ENSSLDG00000016832MSI110092.264ENSIPUG00000001976msi19993.333Ictalurus_punctatus
ENSSLDG00000016832MSI19485.852ENSSTOG00000009799MSI110085.852Ictidomys_tridecemlineatus
ENSSLDG00000016832MSI110074.636ENSJJAG00000010643-10074.636Jaculus_jaculus
ENSSLDG00000016832MSI110084.254ENSJJAG00000010463Msi110084.254Jaculus_jaculus
ENSSLDG00000016832MSI19492.233ENSKMAG00000019877-10092.233Kryptolebias_marmoratus
ENSSLDG00000016832MSI110098.281ENSKMAG00000011251MSI110098.281Kryptolebias_marmoratus
ENSSLDG00000016832MSI110099.140ENSLBEG00000008789MSI110099.140Labrus_bergylta
ENSSLDG00000016832MSI110092.308ENSLBEG00000001375-10092.308Labrus_bergylta
ENSSLDG00000016832MSI19484.795ENSLACG00000018287MSI110084.795Latimeria_chalumnae
ENSSLDG00000016832MSI15578.182ENSLOCG00000008618zgc:1107967178.182Lepisosteus_oculatus
ENSSLDG00000016832MSI19175.831ENSLAFG00000009412MSI110076.721Loxodonta_africana
ENSSLDG00000016832MSI19485.673ENSMFAG00000001798MSI110085.673Macaca_fascicularis
ENSSLDG00000016832MSI19485.673ENSMMUG00000031527MSI19784.770Macaca_mulatta
ENSSLDG00000016832MSI110085.423ENSMNEG00000040034MSI110085.423Macaca_nemestrina
ENSSLDG00000016832MSI19485.061ENSMLEG00000003921MSI110085.061Mandrillus_leucophaeus
ENSSLDG00000016832MSI110098.567ENSMAMG00000002279MSI110098.567Mastacembelus_armatus
ENSSLDG00000016832MSI110091.738ENSMAMG00000018426-10091.738Mastacembelus_armatus
ENSSLDG00000016832MSI110099.427ENSMZEG00005000340-10099.427Maylandia_zebra
ENSSLDG00000016832MSI110092.877ENSMZEG00005026892MSI110092.877Maylandia_zebra
ENSSLDG00000016832MSI16794.083ENSMGAG00000016518-10094.083Meleagris_gallopavo
ENSSLDG00000016832MSI16891.518ENSMAUG00000016820Msi110089.300Mesocricetus_auratus
ENSSLDG00000016832MSI110084.254ENSMICG00000033181MSI110084.254Microcebus_murinus
ENSSLDG00000016832MSI110083.978ENSMOCG00000002286Msi110083.978Microtus_ochrogaster
ENSSLDG00000016832MSI110086.970ENSMMOG00000012265-10086.970Mola_mola
ENSSLDG00000016832MSI19491.613ENSMMOG00000010492MSI19691.613Mola_mola
ENSSLDG00000016832MSI19158.133ENSMODG00000003189-10058.133Monodelphis_domestica
ENSSLDG00000016832MSI19492.378ENSMALG00000001426-10092.378Monopterus_albus
ENSSLDG00000016832MSI110099.713ENSMALG00000017889MSI110099.713Monopterus_albus
ENSSLDG00000016832MSI110083.702MGP_CAROLIEiJ_G0027626Msi19888.973Mus_caroli
ENSSLDG00000016832MSI110083.702ENSMUSG00000054256Msi19888.973Mus_musculus
ENSSLDG00000016832MSI110086.040MGP_PahariEiJ_G0024206Msi19888.593Mus_pahari
ENSSLDG00000016832MSI110083.702MGP_SPRETEiJ_G0028624Msi19888.973Mus_spretus
ENSSLDG00000016832MSI19485.852ENSMPUG00000003168MSI110085.852Mustela_putorius_furo
ENSSLDG00000016832MSI19476.488ENSMLUG00000010313MSI110076.488Myotis_lucifugus
ENSSLDG00000016832MSI19485.106ENSNGAG00000014508Msi19185.106Nannospalax_galili
ENSSLDG00000016832MSI110099.427ENSNBRG00000000841-10099.427Neolamprologus_brichardi
ENSSLDG00000016832MSI18985.246ENSNBRG00000018012MSI19985.246Neolamprologus_brichardi
ENSSLDG00000016832MSI19075.610ENSNLEG00000015636MSI110075.610Nomascus_leucogenys
ENSSLDG00000016832MSI19465.244ENSMEUG00000015759MSI110065.244Notamacropus_eugenii
ENSSLDG00000016832MSI19178.095ENSOPRG00000016879MSI110078.095Ochotona_princeps
ENSSLDG00000016832MSI19485.061ENSODEG00000006328MSI110085.061Octodon_degus
ENSSLDG00000016832MSI110099.427ENSONIG00000011182MSI110099.427Oreochromis_niloticus
ENSSLDG00000016832MSI110089.560ENSONIG00000019452-10089.560Oreochromis_niloticus
ENSSLDG00000016832MSI19485.852ENSOCUG00000027716MSI110085.852Oryctolagus_cuniculus
ENSSLDG00000016832MSI110099.140ENSORLG00000019978-10099.140Oryzias_latipes
ENSSLDG00000016832MSI110091.168ENSORLG00000029593MSI110091.168Oryzias_latipes
ENSSLDG00000016832MSI110099.140ENSORLG00020001208-7199.140Oryzias_latipes_hni
ENSSLDG00000016832MSI110091.168ENSORLG00020008266MSI19990.566Oryzias_latipes_hni
ENSSLDG00000016832MSI110091.168ENSORLG00015003916MSI110091.168Oryzias_latipes_hsok
ENSSLDG00000016832MSI110099.140ENSORLG00015013672-7699.091Oryzias_latipes_hsok
ENSSLDG00000016832MSI110091.453ENSOMEG00000002272-10091.453Oryzias_melastigma
ENSSLDG00000016832MSI110099.140ENSOMEG00000017536MSI110099.140Oryzias_melastigma
ENSSLDG00000016832MSI19982.143ENSOGAG00000003847MSI19982.143Otolemur_garnettii
ENSSLDG00000016832MSI19482.121ENSOARG00000012097MSI110082.121Ovis_aries
ENSSLDG00000016832MSI19485.061ENSPPAG00000043073MSI110085.061Pan_paniscus
ENSSLDG00000016832MSI110084.254ENSPPRG00000000370MSI110084.254Panthera_pardus
ENSSLDG00000016832MSI19485.852ENSPTIG00000008913MSI110085.852Panthera_tigris_altaica
ENSSLDG00000016832MSI110084.254ENSPTRG00000005531MSI110084.254Pan_troglodytes
ENSSLDG00000016832MSI110083.978ENSPANG00000006335MSI110083.978Papio_anubis
ENSSLDG00000016832MSI110093.123ENSPKIG00000023575-10093.123Paramormyrops_kingsleyae
ENSSLDG00000016832MSI110093.333ENSPKIG00000016497MSI110093.333Paramormyrops_kingsleyae
ENSSLDG00000016832MSI19485.714ENSPSIG00000011608-9385.714Pelodiscus_sinensis
ENSSLDG00000016832MSI17980.786ENSPSIG00000009621-10080.786Pelodiscus_sinensis
ENSSLDG00000016832MSI15185.965ENSPSIG00000016295-9584.615Pelodiscus_sinensis
ENSSLDG00000016832MSI19098.990ENSPMGG00000000514MSI19798.990Periophthalmus_magnuspinnatus
ENSSLDG00000016832MSI19474.320ENSPMGG00000007743-9868.571Periophthalmus_magnuspinnatus
ENSSLDG00000016832MSI19483.680ENSPEMG00000010491Msi19583.680Peromyscus_maniculatus_bairdii
ENSSLDG00000016832MSI110098.854ENSPFOG00000013113MSI110098.854Poecilia_formosa
ENSSLDG00000016832MSI110091.738ENSPFOG00000008319-8691.738Poecilia_formosa
ENSSLDG00000016832MSI110091.738ENSPLAG00000012431-9791.738Poecilia_latipinna
ENSSLDG00000016832MSI110098.854ENSPLAG00000014025-10098.854Poecilia_latipinna
ENSSLDG00000016832MSI110098.854ENSPMEG00000012796MSI110098.854Poecilia_mexicana
ENSSLDG00000016832MSI110091.168ENSPMEG00000007025-9385.623Poecilia_mexicana
ENSSLDG00000016832MSI19887.926ENSPREG00000021416-9887.926Poecilia_reticulata
ENSSLDG00000016832MSI17595.050ENSPREG00000014574-10095.050Poecilia_reticulata
ENSSLDG00000016832MSI110083.425ENSPPYG00000005027MSI110083.425Pongo_abelii
ENSSLDG00000016832MSI17690.355ENSPCAG00000002300MSI17290.355Procavia_capensis
ENSSLDG00000016832MSI110084.254ENSPCOG00000017341MSI110084.254Propithecus_coquereli
ENSSLDG00000016832MSI19469.512ENSPVAG00000002225MSI110069.512Pteropus_vampyrus
ENSSLDG00000016832MSI110099.427ENSPNYG00000002529-10099.427Pundamilia_nyererei
ENSSLDG00000016832MSI110092.877ENSPNYG00000004379MSI110092.877Pundamilia_nyererei
ENSSLDG00000016832MSI110093.123ENSPNAG00000019337msi110093.123Pygocentrus_nattereri
ENSSLDG00000016832MSI19485.531ENSRNOG00000001156Msi110085.531Rattus_norvegicus
ENSSLDG00000016832MSI19485.852ENSRBIG00000036889MSI110085.852Rhinopithecus_bieti
ENSSLDG00000016832MSI19484.848ENSRROG00000041076MSI19384.848Rhinopithecus_roxellana
ENSSLDG00000016832MSI19485.673ENSSBOG00000030259MSI19985.673Saimiri_boliviensis_boliviensis
ENSSLDG00000016832MSI19475.817ENSSHAG00000006834MSI110075.817Sarcophilus_harrisii
ENSSLDG00000016832MSI19494.529ENSSFOG00015014964-9594.529Scleropages_formosus
ENSSLDG00000016832MSI19494.822ENSSFOG00015005350MSI110094.822Scleropages_formosus
ENSSLDG00000016832MSI19492.748ENSSMAG00000009156-7391.133Scophthalmus_maximus
ENSSLDG00000016832MSI110091.515ENSSMAG00000018824MSI110091.515Scophthalmus_maximus
ENSSLDG00000016832MSI1100100.000ENSSDUG00000001027MSI1100100.000Seriola_dumerili
ENSSLDG00000016832MSI110092.593ENSSDUG00000022697-10092.593Seriola_dumerili
ENSSLDG00000016832MSI110087.464ENSSPUG00000015741MSI110087.464Sphenodon_punctatus
ENSSLDG00000016832MSI17588.542ENSSPAG00000014085-10088.542Stegastes_partitus
ENSSLDG00000016832MSI15785.625ENSSPAG00000015573zgc:1107968285.625Stegastes_partitus
ENSSLDG00000016832MSI19493.871ENSSPAG00000013098-10093.598Stegastes_partitus
ENSSLDG00000016832MSI110085.131ENSSSCG00000029365MSI110085.531Sus_scrofa
ENSSLDG00000016832MSI19486.765ENSTGUG00000009534MSI110086.765Taeniopygia_guttata
ENSSLDG00000016832MSI18987.402ENSTRUG00000016249MSI110087.402Takifugu_rubripes
ENSSLDG00000016832MSI19485.859ENSTRUG00000015636-7985.859Takifugu_rubripes
ENSSLDG00000016832MSI15391.753ENSTRUG00000021586-9991.753Takifugu_rubripes
ENSSLDG00000016832MSI19965.964ENSTNIG00000019814-9965.964Tetraodon_nigroviridis
ENSSLDG00000016832MSI110094.034ENSTNIG00000011469MSI110094.034Tetraodon_nigroviridis
ENSSLDG00000016832MSI19475.458ENSTBEG00000007182MSI110075.458Tupaia_belangeri
ENSSLDG00000016832MSI17689.474ENSTTRG00000005663MSI17889.474Tursiops_truncatus
ENSSLDG00000016832MSI17585.321ENSUAMG00000015514MSI19487.963Ursus_americanus
ENSSLDG00000016832MSI19483.221ENSUMAG00000006176MSI18883.221Ursus_maritimus
ENSSLDG00000016832MSI19485.106ENSVVUG00000020993MSI110084.384Vulpes_vulpes
ENSSLDG00000016832MSI110085.387ENSXETG00000012216msi110085.960Xenopus_tropicalis
ENSSLDG00000016832MSI19479.677ENSXCOG00000017605MSI18979.677Xiphophorus_couchianus
ENSSLDG00000016832MSI110091.453ENSXMAG00000018237-10091.453Xiphophorus_maculatus
ENSSLDG00000016832MSI110098.281ENSXMAG00000027103MSI110090.208Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us