EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000016868 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: serine/arginine-rich splicing factor 1
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 2360 bases
Position: chrPEQF01099151.1:995133-997492
Accession: 111666131
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000021604	RRM_1	PF00076.22	4.4e-30	1	2
ENSSLDP00000021604	RRM_1	PF00076.22	4.4e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000022315	-	696	XM_023421358	ENSSLDP00000021604	231 (aa)	XP_023277126	-

Gene Model

Click here to download ENSSLDG00000016868's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000016868's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000016868	-	71	35.632	ENSSLDG00000009745	srsf4	55	37.725
ENSSLDG00000016868	-	76	78.125	ENSSLDG00000010543	-	78	78.646
ENSSLDG00000016868	-	81	34.404	ENSSLDG00000022841	srsf6a	57	37.500
ENSSLDG00000016868	-	72	62.032	ENSSLDG00000012305	srsf9	73	58.791
ENSSLDG00000016868	-	94	36.502	ENSSLDG00000023255	srsf5b	69	37.681
ENSSLDG00000016868	-	64	40.230	ENSSLDG00000004146	srsf5a	70	35.484
ENSSLDG00000016868	-	94	71.674	ENSSLDG00000016895	-	78	76.882

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000016868	-	99	82.661	ENSG00000136450	SRSF1	100	89.231	Homo_sapiens
ENSSLDG00000016868	-	76	77.604	ENSAPOG00000002748	-	78	79.167	Acanthochromis_polyacanthus
ENSSLDG00000016868	-	78	85.714	ENSAPOG00000008542	-	80	84.127	Acanthochromis_polyacanthus
ENSSLDG00000016868	-	78	86.387	ENSAMEG00000002635	SRSF1	79	81.675	Ailuropoda_melanoleuca
ENSSLDG00000016868	-	89	76.471	ENSACIG00000008091	srsf1a	83	81.579	Amphilophus_citrinellus
ENSSLDG00000016868	-	78	78.431	ENSAOCG00000000337	-	82	79.412	Amphiprion_ocellaris
ENSSLDG00000016868	-	89	76.126	ENSAOCG00000010671	-	83	79.167	Amphiprion_ocellaris
ENSSLDG00000016868	-	78	78.431	ENSAPEG00000023352	-	81	79.412	Amphiprion_percula
ENSSLDG00000016868	-	89	76.126	ENSAPEG00000009915	-	83	79.167	Amphiprion_percula
ENSSLDG00000016868	-	76	78.646	ENSATEG00000022403	-	77	79.167	Anabas_testudineus
ENSSLDG00000016868	-	81	78.607	ENSATEG00000021567	-	81	84.536	Anabas_testudineus
ENSSLDG00000016868	-	78	82.828	ENSACAG00000005542	-	79	82.828	Anolis_carolinensis
ENSSLDG00000016868	-	79	60.209	ENSANAG00000025417	-	75	59.574	Aotus_nancymaae
ENSSLDG00000016868	-	99	82.661	ENSANAG00000020583	-	99	88.889	Aotus_nancymaae
ENSSLDG00000016868	-	50	67.308	ENSAMXG00000024373	-	72	63.462	Astyanax_mexicanus
ENSSLDG00000016868	-	93	78.333	ENSAMXG00000035996	srsf1a	79	76.000	Astyanax_mexicanus
ENSSLDG00000016868	-	99	82.661	ENSBTAG00000014766	SRSF1	79	83.838	Bos_taurus
ENSSLDG00000016868	-	99	82.661	ENSCJAG00000041713	-	99	88.889	Callithrix_jacchus
ENSSLDG00000016868	-	77	76.142	ENSCJAG00000008111	-	88	75.758	Callithrix_jacchus
ENSSLDG00000016868	-	99	82.661	ENSCAFG00000017430	SRSF1	78	83.838	Canis_familiaris
ENSSLDG00000016868	-	99	82.661	ENSCAFG00020025632	-	78	83.838	Canis_lupus_dingo
ENSSLDG00000016868	-	78	83.838	ENSCHIG00000010787	SRSF1	79	83.838	Capra_hircus
ENSSLDG00000016868	-	99	82.661	ENSTSYG00000013899	-	99	88.889	Carlito_syrichta
ENSSLDG00000016868	-	99	82.661	ENSCPOG00000032681	-	79	83.838	Cavia_porcellus
ENSSLDG00000016868	-	99	82.661	ENSCCAG00000029484	-	99	88.889	Cebus_capucinus
ENSSLDG00000016868	-	99	82.661	ENSCATG00000042294	-	99	88.889	Cercocebus_atys
ENSSLDG00000016868	-	99	82.661	ENSCLAG00000014707	-	79	83.838	Chinchilla_lanigera
ENSSLDG00000016868	-	99	81.855	ENSCSAG00000005642	-	78	82.828	Chlorocebus_sabaeus
ENSSLDG00000016868	-	78	83.838	ENSCHOG00000001899	SRSF1	79	83.838	Choloepus_hoffmanni
ENSSLDG00000016868	-	99	82.258	ENSCPBG00000009851	-	79	83.333	Chrysemys_picta_bellii
ENSSLDG00000016868	-	99	82.661	ENSCANG00000029726	-	99	88.889	Colobus_angolensis_palliatus
ENSSLDG00000016868	-	99	82.661	ENSCGRG00001000670	Srsf1	78	83.838	Cricetulus_griseus_chok1gshd
ENSSLDG00000016868	-	99	82.661	ENSCGRG00000005590	Srsf1	79	83.838	Cricetulus_griseus_crigri
ENSSLDG00000016868	-	77	70.892	ENSCSEG00000009973	-	81	76.995	Cynoglossus_semilaevis
ENSSLDG00000016868	-	76	82.258	ENSCSEG00000014272	-	81	80.108	Cynoglossus_semilaevis
ENSSLDG00000016868	-	76	78.646	ENSCVAG00000018617	-	78	79.167	Cyprinodon_variegatus
ENSSLDG00000016868	-	76	77.041	ENSCVAG00000005458	-	91	78.261	Cyprinodon_variegatus
ENSSLDG00000016868	-	77	78.049	ENSDARG00000057691	srsf1a	99	77.083	Danio_rerio
ENSSLDG00000016868	-	77	83.590	ENSDARG00000017843	srsf1b	79	83.590	Danio_rerio
ENSSLDG00000016868	-	99	82.661	ENSDNOG00000011737	-	78	83.838	Dasypus_novemcinctus
ENSSLDG00000016868	-	99	82.661	ENSDORG00000015082	Srsf1	79	83.838	Dipodomys_ordii
ENSSLDG00000016868	-	72	82.162	ENSETEG00000005349	-	63	76.757	Echinops_telfairi
ENSSLDG00000016868	-	99	82.661	ENSEASG00005002922	-	78	83.838	Equus_asinus_asinus
ENSSLDG00000016868	-	78	83.838	ENSECAG00000016654	SRSF1	79	83.838	Equus_caballus
ENSSLDG00000016868	-	72	83.243	ENSEEUG00000009255	-	63	83.243	Erinaceus_europaeus
ENSSLDG00000016868	-	77	77.320	ENSELUG00000021646	srsf1a	77	78.351	Esox_lucius
ENSSLDG00000016868	-	99	82.661	ENSFCAG00000002250	-	92	83.243	Felis_catus
ENSSLDG00000016868	-	76	89.474	ENSFALG00000005062	-	78	63.636	Ficedula_albicollis
ENSSLDG00000016868	-	99	82.661	ENSFDAG00000010646	-	79	83.838	Fukomys_damarensis
ENSSLDG00000016868	-	89	76.126	ENSFHEG00000003174	srsf1a	83	79.167	Fundulus_heteroclitus
ENSSLDG00000016868	-	90	81.279	ENSGMOG00000014787	-	80	80.645	Gadus_morhua
ENSSLDG00000016868	-	78	83.333	ENSGALG00000005525	SRSF1	79	83.333	Gallus_gallus
ENSSLDG00000016868	-	78	83.684	ENSGACG00000020621	srsf1b	80	82.105	Gasterosteus_aculeatus
ENSSLDG00000016868	-	99	82.258	ENSGAGG00000022965	-	78	83.333	Gopherus_agassizii
ENSSLDG00000016868	-	99	82.661	ENSGGOG00000004386	SRSF1	99	88.889	Gorilla_gorilla
ENSSLDG00000016868	-	89	76.471	ENSHBUG00000016788	srsf1a	80	81.579	Haplochromis_burtoni
ENSSLDG00000016868	-	64	83.030	ENSHGLG00000000600	-	76	83.030	Heterocephalus_glaber_female
ENSSLDG00000016868	-	64	83.030	ENSHGLG00000000669	-	76	83.030	Heterocephalus_glaber_female
ENSSLDG00000016868	-	99	82.661	ENSHGLG00100016906	-	79	83.838	Heterocephalus_glaber_male
ENSSLDG00000016868	-	76	77.778	ENSHCOG00000018918	srsf1a	77	77.778	Hippocampus_comes
ENSSLDG00000016868	-	76	79.500	ENSIPUG00000017039	srsf1a	79	75.500	Ictalurus_punctatus
ENSSLDG00000016868	-	78	82.741	ENSIPUG00000008750	srsf1b	80	79.188	Ictalurus_punctatus
ENSSLDG00000016868	-	99	82.661	ENSSTOG00000000243	-	92	83.243	Ictidomys_tridecemlineatus
ENSSLDG00000016868	-	99	82.661	ENSJJAG00000000102	-	79	83.838	Jaculus_jaculus
ENSSLDG00000016868	-	76	78.238	ENSKMAG00000019232	srsf1a	78	78.756	Kryptolebias_marmoratus
ENSSLDG00000016868	-	89	75.676	ENSLBEG00000020864	-	83	78.646	Labrus_bergylta
ENSSLDG00000016868	-	78	79.104	ENSLBEG00000015294	-	80	78.500	Labrus_bergylta
ENSSLDG00000016868	-	77	82.474	ENSLACG00000014160	srsf1a	73	81.347	Latimeria_chalumnae
ENSSLDG00000016868	-	78	82.234	ENSLOCG00000005994	srsf1a	79	78.680	Lepisosteus_oculatus
ENSSLDG00000016868	-	78	84.615	ENSLAFG00000025743	SRSF1	79	83.838	Loxodonta_africana
ENSSLDG00000016868	-	99	82.661	ENSMFAG00000040003	-	99	88.889	Macaca_fascicularis
ENSSLDG00000016868	-	99	82.661	ENSMMUG00000004725	SRSF1	99	88.889	Macaca_mulatta
ENSSLDG00000016868	-	99	79.839	ENSMMUG00000003260	-	95	80.711	Macaca_mulatta
ENSSLDG00000016868	-	99	82.661	ENSMNEG00000027680	-	99	88.889	Macaca_nemestrina
ENSSLDG00000016868	-	99	79.435	ENSMNEG00000015983	-	78	80.303	Macaca_nemestrina
ENSSLDG00000016868	-	99	79.835	ENSMLEG00000015243	-	77	77.720	Mandrillus_leucophaeus
ENSSLDG00000016868	-	78	83.838	ENSMLEG00000040509	SRSF1	79	83.838	Mandrillus_leucophaeus
ENSSLDG00000016868	-	78	83.249	ENSMAMG00000019691	-	81	80.203	Mastacembelus_armatus
ENSSLDG00000016868	-	76	78.646	ENSMAMG00000018454	-	78	79.167	Mastacembelus_armatus
ENSSLDG00000016868	-	78	85.417	ENSMAMG00000019687	-	80	84.375	Mastacembelus_armatus
ENSSLDG00000016868	-	99	82.661	ENSMAUG00000021845	Srsf1	79	83.838	Mesocricetus_auratus
ENSSLDG00000016868	-	99	82.661	ENSMICG00000013639	-	99	88.889	Microcebus_murinus
ENSSLDG00000016868	-	99	82.661	ENSMOCG00000001996	Srsf1	79	83.838	Microtus_ochrogaster
ENSSLDG00000016868	-	89	77.928	ENSMMOG00000014354	srsf1a	83	78.646	Mola_mola
ENSSLDG00000016868	-	72	82.258	ENSMODG00000014781	-	63	77.419	Monodelphis_domestica
ENSSLDG00000016868	-	76	78.646	ENSMALG00000017129	-	75	78.646	Monopterus_albus
ENSSLDG00000016868	-	81	88.235	ENSMALG00000007763	-	79	87.222	Monopterus_albus
ENSSLDG00000016868	-	99	82.661	MGP_CAROLIEiJ_G0016943	Srsf1	92	83.243	Mus_caroli
ENSSLDG00000016868	-	99	82.661	ENSMUSG00000018379	Srsf1	92	83.243	Mus_musculus
ENSSLDG00000016868	-	99	82.661	MGP_PahariEiJ_G0018074	Srsf1	79	83.838	Mus_pahari
ENSSLDG00000016868	-	99	82.661	MGP_SPRETEiJ_G0017790	Srsf1	92	83.243	Mus_spretus
ENSSLDG00000016868	-	78	83.838	ENSMPUG00000015369	SRSF1	79	83.838	Mustela_putorius_furo
ENSSLDG00000016868	-	81	79.798	ENSMLUG00000023995	-	79	77.083	Myotis_lucifugus
ENSSLDG00000016868	-	78	83.838	ENSMLUG00000011040	SRSF1	79	83.838	Myotis_lucifugus
ENSSLDG00000016868	-	78	83.838	ENSNGAG00000011395	Srsf1	79	83.838	Nannospalax_galili
ENSSLDG00000016868	-	99	81.277	ENSNBRG00000008041	srsf1b	80	83.333	Neolamprologus_brichardi
ENSSLDG00000016868	-	99	82.661	ENSNLEG00000008088	-	99	88.889	Nomascus_leucogenys
ENSSLDG00000016868	-	50	81.203	ENSOPRG00000001234	-	72	81.203	Ochotona_princeps
ENSSLDG00000016868	-	98	82.591	ENSODEG00000011481	-	79	83.333	Octodon_degus
ENSSLDG00000016868	-	76	79.058	ENSONIG00000013160	-	77	81.579	Oreochromis_niloticus
ENSSLDG00000016868	-	94	82.128	ENSONIG00000004860	-	81	79.695	Oreochromis_niloticus
ENSSLDG00000016868	-	95	65.401	ENSOCUG00000010894	-	77	65.263	Oryctolagus_cuniculus
ENSSLDG00000016868	-	76	78.646	ENSORLG00000004580	srsf1a	78	79.167	Oryzias_latipes
ENSSLDG00000016868	-	89	76.126	ENSORLG00020009456	srsf1a	83	79.167	Oryzias_latipes_hni
ENSSLDG00000016868	-	89	76.126	ENSORLG00015014384	srsf1a	83	79.167	Oryzias_latipes_hsok
ENSSLDG00000016868	-	69	75.429	ENSOMEG00000004106	srsf1a	71	76.000	Oryzias_melastigma
ENSSLDG00000016868	-	91	78.070	ENSOGAG00000025950	-	79	83.838	Otolemur_garnettii
ENSSLDG00000016868	-	78	83.957	ENSOARG00000008323	SRSF1	78	82.888	Ovis_aries
ENSSLDG00000016868	-	99	82.661	ENSPPAG00000043403	-	99	88.889	Pan_paniscus
ENSSLDG00000016868	-	99	82.661	ENSPPRG00000004238	-	92	83.243	Panthera_pardus
ENSSLDG00000016868	-	99	82.661	ENSPTRG00000049077	SRSF1	99	88.889	Pan_troglodytes
ENSSLDG00000016868	-	99	82.661	ENSPANG00000022305	-	99	88.889	Papio_anubis
ENSSLDG00000016868	-	98	67.841	ENSPANG00000030275	-	75	63.128	Papio_anubis
ENSSLDG00000016868	-	87	81.106	ENSPKIG00000007204	srsf1a	83	78.646	Paramormyrops_kingsleyae
ENSSLDG00000016868	-	78	82.741	ENSPKIG00000012857	srsf1b	80	79.695	Paramormyrops_kingsleyae
ENSSLDG00000016868	-	78	76.500	ENSPSIG00000009000	-	80	76.500	Pelodiscus_sinensis
ENSSLDG00000016868	-	89	80.751	ENSPMGG00000013112	-	82	82.514	Periophthalmus_magnuspinnatus
ENSSLDG00000016868	-	79	80.513	ENSPMGG00000005467	-	78	81.383	Periophthalmus_magnuspinnatus
ENSSLDG00000016868	-	99	82.661	ENSPEMG00000021416	Srsf1	79	83.838	Peromyscus_maniculatus_bairdii
ENSSLDG00000016868	-	78	82.915	ENSPCIG00000006076	-	80	78.392	Phascolarctos_cinereus
ENSSLDG00000016868	-	78	77.387	ENSPFOG00000018325	-	70	79.487	Poecilia_formosa
ENSSLDG00000016868	-	78	77.387	ENSPLAG00000008416	srsf1b	79	79.487	Poecilia_latipinna
ENSSLDG00000016868	-	78	77.387	ENSPMEG00000002388	-	79	79.487	Poecilia_mexicana
ENSSLDG00000016868	-	76	78.646	ENSPREG00000009667	srsf1a	78	79.167	Poecilia_reticulata
ENSSLDG00000016868	-	99	82.661	ENSPPYG00000008240	SRSF1	79	83.838	Pongo_abelii
ENSSLDG00000016868	-	78	83.838	ENSPCAG00000005199	SRSF1	79	83.838	Procavia_capensis
ENSSLDG00000016868	-	99	82.661	ENSPCOG00000023654	-	99	88.889	Propithecus_coquereli
ENSSLDG00000016868	-	79	65.000	ENSPCOG00000025736	-	95	68.342	Propithecus_coquereli
ENSSLDG00000016868	-	59	95.775	ENSPVAG00000000519	-	54	95.775	Pteropus_vampyrus
ENSSLDG00000016868	-	78	82.902	ENSPNAG00000014601	srsf1b	80	80.829	Pygocentrus_nattereri
ENSSLDG00000016868	-	93	77.155	ENSPNAG00000022241	srsf1a	78	81.152	Pygocentrus_nattereri
ENSSLDG00000016868	-	78	83.838	ENSRNOG00000050323	Srsf1	79	83.838	Rattus_norvegicus
ENSSLDG00000016868	-	99	82.661	ENSRBIG00000034445	-	99	88.889	Rhinopithecus_bieti
ENSSLDG00000016868	-	99	82.661	ENSRROG00000041506	-	99	88.889	Rhinopithecus_roxellana
ENSSLDG00000016868	-	99	82.661	ENSSBOG00000025377	-	99	88.889	Saimiri_boliviensis_boliviensis
ENSSLDG00000016868	-	78	82.915	ENSSHAG00000002552	-	80	78.392	Sarcophilus_harrisii
ENSSLDG00000016868	-	77	78.974	ENSSFOG00015004800	srsf1a	79	79.487	Scleropages_formosus
ENSSLDG00000016868	-	78	76.585	ENSSMAG00000009719	-	80	81.463	Scophthalmus_maximus
ENSSLDG00000016868	-	76	78.125	ENSSMAG00000007018	-	78	78.646	Scophthalmus_maximus
ENSSLDG00000016868	-	89	75.676	ENSSDUG00000011303	-	83	78.646	Seriola_dumerili
ENSSLDG00000016868	-	98	69.658	ENSSDUG00000003929	-	84	75.500	Seriola_dumerili
ENSSLDG00000016868	-	72	83.243	ENSSARG00000010949	-	63	83.243	Sorex_araneus
ENSSLDG00000016868	-	99	82.258	ENSSPUG00000000804	-	93	82.703	Sphenodon_punctatus
ENSSLDG00000016868	-	76	78.238	ENSSPAG00000022562	-	78	78.756	Stegastes_partitus
ENSSLDG00000016868	-	78	81.429	ENSSPAG00000014152	-	81	81.429	Stegastes_partitus
ENSSLDG00000016868	-	99	82.661	ENSSSCG00000017626	-	79	83.838	Sus_scrofa
ENSSLDG00000016868	-	50	80.597	ENSTGUG00000008416	-	72	80.597	Taeniopygia_guttata
ENSSLDG00000016868	-	76	78.125	ENSTRUG00000003691	srsf1a	78	78.646	Takifugu_rubripes
ENSSLDG00000016868	-	76	78.125	ENSTNIG00000016223	srsf1a	77	78.646	Tetraodon_nigroviridis
ENSSLDG00000016868	-	72	81.622	ENSTBEG00000015378	-	63	81.622	Tupaia_belangeri
ENSSLDG00000016868	-	50	81.203	ENSTTRG00000007310	SRSF1	72	81.203	Tursiops_truncatus
ENSSLDG00000016868	-	78	83.838	ENSUAMG00000009858	SRSF1	79	83.838	Ursus_americanus
ENSSLDG00000016868	-	99	82.661	ENSUMAG00000000455	-	78	83.838	Ursus_maritimus
ENSSLDG00000016868	-	78	83.333	ENSVPAG00000010094	SRSF1	79	83.333	Vicugna_pacos
ENSSLDG00000016868	-	99	82.661	ENSVVUG00000011882	-	78	83.838	Vulpes_vulpes
ENSSLDG00000016868	-	78	82.812	ENSXETG00000008954	srsf1	81	75.576	Xenopus_tropicalis
ENSSLDG00000016868	-	76	78.646	ENSXMAG00000011766	srsf1a	78	79.167	Xiphophorus_maculatus