EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000016879 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: zinc finger protein 32-like
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 5898 bases
Position: chrPEQF01099343.1:1810306-1816203
Accession: 111670915
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000021613	zf-C2H2	PF00096.26	3.3e-21	1	4
ENSSLDP00000021613	zf-C2H2	PF00096.26	3.3e-21	2	4
ENSSLDP00000021613	zf-C2H2	PF00096.26	3.3e-21	3	4
ENSSLDP00000021613	zf-C2H2	PF00096.26	3.3e-21	4	4
ENSSLDP00000021613	zf-met	PF12874.7	7.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000022323	-	5772	XM_023427864	ENSSLDP00000021613	393 (aa)	XP_023283632	UPI000C6F9115

Gene Model

Click here to download ENSSLDG00000016879's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000016879's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000016879	-	72	43.434	ENSSLDG00000020655	-	84	43.434
ENSSLDG00000016879	-	65	50.000	ENSSLDG00000007756	-	92	54.412
ENSSLDG00000016879	-	71	42.241	ENSSLDG00000001780	znf652	51	42.241
ENSSLDG00000016879	-	72	40.000	ENSSLDG00000005999	-	81	40.000
ENSSLDG00000016879	-	68	47.414	ENSSLDG00000012133	-	94	48.276
ENSSLDG00000016879	-	84	47.222	ENSSLDG00000020990	-	81	47.222

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000016879	-	91	63.966	ENSATEG00000023508	-	76	63.966	Anabas_testudineus
ENSSLDG00000016879	-	73	54.545	ENSELUG00000022942	-	89	54.545	Esox_lucius
ENSSLDG00000016879	-	70	44.545	ENSELUG00000000423	-	89	44.545	Esox_lucius
ENSSLDG00000016879	-	72	32.919	ENSELUG00000000281	-	74	33.230	Esox_lucius
ENSSLDG00000016879	-	73	42.336	ENSELUG00000007694	-	91	42.336	Esox_lucius
ENSSLDG00000016879	-	75	46.552	ENSHCOG00000020924	-	93	46.552	Hippocampus_comes
ENSSLDG00000016879	-	68	49.194	ENSHCOG00000015355	-	88	52.941	Hippocampus_comes
ENSSLDG00000016879	-	61	38.596	ENSMMOG00000006322	-	81	38.596	Mola_mola
ENSSLDG00000016879	-	63	53.226	ENSORLG00000027366	-	86	53.226	Oryzias_latipes
ENSSLDG00000016879	-	73	50.000	ENSORLG00000027303	-	98	50.000	Oryzias_latipes
ENSSLDG00000016879	-	72	45.690	ENSORLG00000028456	-	82	45.690	Oryzias_latipes
ENSSLDG00000016879	-	65	48.276	ENSORLG00000000247	-	95	48.276	Oryzias_latipes
ENSSLDG00000016879	-	68	47.788	ENSORLG00000026432	-	87	47.788	Oryzias_latipes
ENSSLDG00000016879	-	65	41.880	ENSORLG00020007967	-	93	41.880	Oryzias_latipes_hni
ENSSLDG00000016879	-	65	31.769	ENSORLG00020008424	-	96	39.130	Oryzias_latipes_hni
ENSSLDG00000016879	-	66	46.667	ENSORLG00015011496	-	96	46.667	Oryzias_latipes_hsok
ENSSLDG00000016879	-	64	47.826	ENSORLG00015012840	-	86	47.826	Oryzias_latipes_hsok
ENSSLDG00000016879	-	65	48.276	ENSORLG00015012158	-	94	48.276	Oryzias_latipes_hsok
ENSSLDG00000016879	-	75	50.000	ENSOMEG00000000342	-	89	50.000	Oryzias_melastigma
ENSSLDG00000016879	-	65	46.789	ENSOMEG00000013244	-	95	46.789	Oryzias_melastigma
ENSSLDG00000016879	-	71	50.000	ENSOMEG00000019437	-	93	50.000	Oryzias_melastigma
ENSSLDG00000016879	-	66	47.170	ENSOMEG00000021676	-	96	47.170	Oryzias_melastigma
ENSSLDG00000016879	-	70	54.545	ENSOMEG00000013842	-	90	54.545	Oryzias_melastigma
ENSSLDG00000016879	-	63	46.552	ENSOMEG00000017797	-	97	46.552	Oryzias_melastigma
ENSSLDG00000016879	-	70	41.606	ENSPREG00000002615	-	72	41.606	Poecilia_reticulata
ENSSLDG00000016879	-	79	96.154	ENSSDUG00000022162	-	96	96.154	Seriola_dumerili