EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000016895 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: serine/arginine-rich splicing factor 1B-like
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 2253 bases
Position: chrPEQF01099151.1:1000207-1002459
Accession: 111666156
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000021690	RRM_1	PF00076.22	2.4e-28	1	2
ENSSLDP00000021690	RRM_1	PF00076.22	2.4e-28	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000022404	-	717	XM_023421390	ENSSLDP00000021690	238 (aa)	XP_023277158	-

Gene Model

Click here to download ENSSLDG00000016895's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000016895's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000016895	-	71	39.412	ENSSLDG00000009745	srsf4	58	34.054
ENSSLDG00000016895	-	78	76.882	ENSSLDG00000016868	-	94	71.674
ENSSLDG00000016895	-	92	56.444	ENSSLDG00000012305	srsf9	85	56.075
ENSSLDG00000016895	-	77	83.696	ENSSLDG00000010543	-	74	80.978
ENSSLDG00000016895	-	69	38.636	ENSSLDG00000004146	srsf5a	58	40.341
ENSSLDG00000016895	-	67	45.402	ENSSLDG00000023255	srsf5b	61	43.478

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000016895	-	99	76.113	ENSG00000136450	SRSF1	100	86.154	Homo_sapiens
ENSSLDG00000016895	-	77	83.696	ENSAPOG00000002748	-	74	80.978	Acanthochromis_polyacanthus
ENSSLDG00000016895	-	78	84.409	ENSAPOG00000008542	-	95	76.471	Acanthochromis_polyacanthus
ENSSLDG00000016895	-	78	82.258	ENSAMEG00000002635	SRSF1	95	75.319	Ailuropoda_melanoleuca
ENSSLDG00000016895	-	77	83.152	ENSACIG00000008091	srsf1a	98	71.053	Amphilophus_citrinellus
ENSSLDG00000016895	-	78	83.420	ENSAOCG00000000337	-	96	76.471	Amphiprion_ocellaris
ENSSLDG00000016895	-	77	83.696	ENSAOCG00000010671	-	98	70.614	Amphiprion_ocellaris
ENSSLDG00000016895	-	77	83.696	ENSAPEG00000009915	-	98	70.614	Amphiprion_percula
ENSSLDG00000016895	-	78	83.420	ENSAPEG00000023352	-	94	76.891	Amphiprion_percula
ENSSLDG00000016895	-	78	82.796	ENSATEG00000021567	-	95	77.056	Anabas_testudineus
ENSSLDG00000016895	-	77	83.696	ENSATEG00000022403	-	74	80.978	Anabas_testudineus
ENSSLDG00000016895	-	78	83.422	ENSACAG00000005542	-	95	76.695	Anolis_carolinensis
ENSSLDG00000016895	-	99	76.113	ENSANAG00000020583	-	99	86.111	Aotus_nancymaae
ENSSLDG00000016895	-	78	60.215	ENSANAG00000025417	-	94	53.617	Aotus_nancymaae
ENSSLDG00000016895	-	77	85.185	ENSAMXG00000035996	srsf1a	94	75.630	Astyanax_mexicanus
ENSSLDG00000016895	-	51	71.724	ENSAMXG00000024373	-	88	64.062	Astyanax_mexicanus
ENSSLDG00000016895	-	99	76.113	ENSBTAG00000014766	SRSF1	95	76.695	Bos_taurus
ENSSLDG00000016895	-	99	76.113	ENSCJAG00000041713	-	99	86.111	Callithrix_jacchus
ENSSLDG00000016895	-	76	78.022	ENSCJAG00000008111	-	82	77.297	Callithrix_jacchus
ENSSLDG00000016895	-	99	76.113	ENSCAFG00000017430	SRSF1	93	76.695	Canis_familiaris
ENSSLDG00000016895	-	99	76.113	ENSCAFG00020025632	-	93	76.695	Canis_lupus_dingo
ENSSLDG00000016895	-	78	83.422	ENSCHIG00000010787	SRSF1	95	76.695	Capra_hircus
ENSSLDG00000016895	-	99	76.113	ENSTSYG00000013899	-	99	86.111	Carlito_syrichta
ENSSLDG00000016895	-	99	76.113	ENSCPOG00000032681	-	95	76.695	Cavia_porcellus
ENSSLDG00000016895	-	99	76.113	ENSCCAG00000029484	-	99	86.111	Cebus_capucinus
ENSSLDG00000016895	-	99	76.113	ENSCATG00000042294	-	99	86.111	Cercocebus_atys
ENSSLDG00000016895	-	99	76.113	ENSCLAG00000014707	-	95	76.695	Chinchilla_lanigera
ENSSLDG00000016895	-	99	75.304	ENSCSAG00000005642	-	93	75.847	Chlorocebus_sabaeus
ENSSLDG00000016895	-	78	83.422	ENSCHOG00000001899	SRSF1	95	76.695	Choloepus_hoffmanni
ENSSLDG00000016895	-	99	76.518	ENSCPBG00000009851	-	95	77.119	Chrysemys_picta_bellii
ENSSLDG00000016895	-	99	76.113	ENSCANG00000029726	-	99	86.111	Colobus_angolensis_palliatus
ENSSLDG00000016895	-	99	76.113	ENSCGRG00001000670	Srsf1	93	76.695	Cricetulus_griseus_chok1gshd
ENSSLDG00000016895	-	99	76.113	ENSCGRG00000005590	Srsf1	95	76.695	Cricetulus_griseus_crigri
ENSSLDG00000016895	-	78	76.847	ENSCSEG00000009973	-	95	70.400	Cynoglossus_semilaevis
ENSSLDG00000016895	-	77	81.522	ENSCSEG00000014272	-	97	67.965	Cynoglossus_semilaevis
ENSSLDG00000016895	-	77	82.796	ENSCVAG00000005458	-	92	81.720	Cyprinodon_variegatus
ENSSLDG00000016895	-	77	83.696	ENSCVAG00000018617	-	74	80.978	Cyprinodon_variegatus
ENSSLDG00000016895	-	77	82.990	ENSDARG00000057691	srsf1a	99	82.292	Danio_rerio
ENSSLDG00000016895	-	77	85.326	ENSDARG00000017843	srsf1b	94	77.922	Danio_rerio
ENSSLDG00000016895	-	99	76.113	ENSDNOG00000011737	-	93	76.695	Dasypus_novemcinctus
ENSSLDG00000016895	-	99	76.113	ENSDORG00000015082	Srsf1	95	76.695	Dipodomys_ordii
ENSSLDG00000016895	-	77	82.703	ENSETEG00000005349	-	63	83.784	Echinops_telfairi
ENSSLDG00000016895	-	99	76.113	ENSEASG00005002922	-	93	76.695	Equus_asinus_asinus
ENSSLDG00000016895	-	78	83.422	ENSECAG00000016654	SRSF1	95	76.695	Equus_caballus
ENSSLDG00000016895	-	83	79.293	ENSEEUG00000009255	-	67	80.303	Erinaceus_europaeus
ENSSLDG00000016895	-	79	83.957	ENSELUG00000021646	srsf1a	73	84.153	Esox_lucius
ENSSLDG00000016895	-	99	76.113	ENSFCAG00000002250	-	92	84.946	Felis_catus
ENSSLDG00000016895	-	76	85.965	ENSFALG00000005062	-	93	59.322	Ficedula_albicollis
ENSSLDG00000016895	-	99	76.113	ENSFDAG00000010646	-	95	76.695	Fukomys_damarensis
ENSSLDG00000016895	-	77	83.696	ENSFHEG00000003174	srsf1a	98	70.614	Fundulus_heteroclitus
ENSSLDG00000016895	-	76	84.066	ENSGMOG00000014787	-	95	75.330	Gadus_morhua
ENSSLDG00000016895	-	78	83.957	ENSGALG00000005525	SRSF1	95	77.119	Gallus_gallus
ENSSLDG00000016895	-	78	82.258	ENSGACG00000020621	srsf1b	75	80.645	Gasterosteus_aculeatus
ENSSLDG00000016895	-	99	76.518	ENSGAGG00000022965	-	93	77.119	Gopherus_agassizii
ENSSLDG00000016895	-	99	76.113	ENSGGOG00000004386	SRSF1	99	86.111	Gorilla_gorilla
ENSSLDG00000016895	-	78	82.703	ENSHBUG00000016788	srsf1a	95	70.742	Haplochromis_burtoni
ENSSLDG00000016895	-	64	84.416	ENSHGLG00000000600	-	94	76.355	Heterocephalus_glaber_female
ENSSLDG00000016895	-	64	84.416	ENSHGLG00000000669	-	94	76.355	Heterocephalus_glaber_female
ENSSLDG00000016895	-	99	76.113	ENSHGLG00100016906	-	95	76.695	Heterocephalus_glaber_male
ENSSLDG00000016895	-	79	78.238	ENSHCOG00000018918	srsf1a	89	70.175	Hippocampus_comes
ENSSLDG00000016895	-	78	87.634	ENSIPUG00000008750	srsf1b	95	78.541	Ictalurus_punctatus
ENSSLDG00000016895	-	77	83.246	ENSIPUG00000017039	srsf1a	95	73.750	Ictalurus_punctatus
ENSSLDG00000016895	-	99	76.113	ENSSTOG00000000243	-	96	82.812	Ictidomys_tridecemlineatus
ENSSLDG00000016895	-	99	76.113	ENSJJAG00000000102	-	95	76.695	Jaculus_jaculus
ENSSLDG00000016895	-	53	82.540	ENSJJAG00000014464	-	93	82.258	Jaculus_jaculus
ENSSLDG00000016895	-	77	83.696	ENSKMAG00000019232	srsf1a	74	82.609	Kryptolebias_marmoratus
ENSSLDG00000016895	-	78	78.947	ENSLBEG00000015294	-	94	71.489	Labrus_bergylta
ENSSLDG00000016895	-	77	83.696	ENSLBEG00000020864	-	98	70.614	Labrus_bergylta
ENSSLDG00000016895	-	77	84.699	ENSLACG00000014160	srsf1a	87	75.862	Latimeria_chalumnae
ENSSLDG00000016895	-	78	86.559	ENSLOCG00000005994	srsf1a	95	77.021	Lepisosteus_oculatus
ENSSLDG00000016895	-	78	83.422	ENSLAFG00000025743	SRSF1	95	76.695	Loxodonta_africana
ENSSLDG00000016895	-	99	76.113	ENSMFAG00000040003	-	99	86.111	Macaca_fascicularis
ENSSLDG00000016895	-	99	76.113	ENSMMUG00000004725	SRSF1	99	86.111	Macaca_mulatta
ENSSLDG00000016895	-	99	72.874	ENSMMUG00000003260	-	90	79.679	Macaca_mulatta
ENSSLDG00000016895	-	99	76.113	ENSMNEG00000027680	-	99	86.111	Macaca_nemestrina
ENSSLDG00000016895	-	99	72.470	ENSMNEG00000015983	-	93	72.458	Macaca_nemestrina
ENSSLDG00000016895	-	99	72.764	ENSMLEG00000015243	-	93	72.340	Mandrillus_leucophaeus
ENSSLDG00000016895	-	78	83.422	ENSMLEG00000040509	SRSF1	95	76.695	Mandrillus_leucophaeus
ENSSLDG00000016895	-	77	83.696	ENSMAMG00000018454	-	74	80.978	Mastacembelus_armatus
ENSSLDG00000016895	-	78	84.946	ENSMAMG00000019687	-	95	76.395	Mastacembelus_armatus
ENSSLDG00000016895	-	78	90.323	ENSMAMG00000019691	-	95	81.818	Mastacembelus_armatus
ENSSLDG00000016895	-	99	76.113	ENSMAUG00000021845	Srsf1	95	76.695	Mesocricetus_auratus
ENSSLDG00000016895	-	99	76.113	ENSMICG00000013639	-	99	86.111	Microcebus_murinus
ENSSLDG00000016895	-	99	76.113	ENSMOCG00000001996	Srsf1	95	76.695	Microtus_ochrogaster
ENSSLDG00000016895	-	77	82.609	ENSMMOG00000014354	srsf1a	98	70.175	Mola_mola
ENSSLDG00000016895	-	77	84.946	ENSMODG00000014781	-	63	84.409	Monodelphis_domestica
ENSSLDG00000016895	-	77	82.609	ENSMALG00000017129	-	71	80.978	Monopterus_albus
ENSSLDG00000016895	-	78	72.043	ENSMALG00000007763	-	95	68.398	Monopterus_albus
ENSSLDG00000016895	-	99	76.113	MGP_CAROLIEiJ_G0016943	Srsf1	95	82.812	Mus_caroli
ENSSLDG00000016895	-	99	76.113	ENSMUSG00000018379	Srsf1	95	82.812	Mus_musculus
ENSSLDG00000016895	-	99	76.113	MGP_PahariEiJ_G0018074	Srsf1	95	76.695	Mus_pahari
ENSSLDG00000016895	-	99	76.113	MGP_SPRETEiJ_G0017790	Srsf1	95	82.812	Mus_spretus
ENSSLDG00000016895	-	78	83.422	ENSMPUG00000015369	SRSF1	95	76.695	Mustela_putorius_furo
ENSSLDG00000016895	-	78	79.570	ENSMLUG00000023995	-	95	71.489	Myotis_lucifugus
ENSSLDG00000016895	-	78	83.422	ENSMLUG00000011040	SRSF1	95	76.695	Myotis_lucifugus
ENSSLDG00000016895	-	78	83.422	ENSNGAG00000011395	Srsf1	95	76.695	Nannospalax_galili
ENSSLDG00000016895	-	100	73.770	ENSNBRG00000008041	srsf1b	94	68.261	Neolamprologus_brichardi
ENSSLDG00000016895	-	99	76.113	ENSNLEG00000008088	-	99	86.111	Nomascus_leucogenys
ENSSLDG00000016895	-	53	82.677	ENSMEUG00000002783	-	99	83.333	Notamacropus_eugenii
ENSSLDG00000016895	-	51	81.967	ENSOPRG00000001234	-	93	73.099	Ochotona_princeps
ENSSLDG00000016895	-	98	76.230	ENSODEG00000011481	-	95	76.271	Octodon_degus
ENSSLDG00000016895	-	78	82.703	ENSONIG00000013160	-	74	80.645	Oreochromis_niloticus
ENSSLDG00000016895	-	95	81.974	ENSONIG00000004860	-	95	81.385	Oreochromis_niloticus
ENSSLDG00000016895	-	100	60.317	ENSOCUG00000010894	-	95	57.741	Oryctolagus_cuniculus
ENSSLDG00000016895	-	77	83.696	ENSORLG00000004580	srsf1a	74	80.978	Oryzias_latipes
ENSSLDG00000016895	-	77	83.696	ENSORLG00020009456	srsf1a	98	70.614	Oryzias_latipes_hni
ENSSLDG00000016895	-	77	83.696	ENSORLG00015014384	srsf1a	98	70.614	Oryzias_latipes_hsok
ENSSLDG00000016895	-	69	83.636	ENSOMEG00000004106	srsf1a	67	80.606	Oryzias_melastigma
ENSSLDG00000016895	-	85	77.512	ENSOGAG00000025950	-	95	76.695	Otolemur_garnettii
ENSSLDG00000016895	-	78	81.183	ENSOARG00000008323	SRSF1	94	72.766	Ovis_aries
ENSSLDG00000016895	-	99	76.113	ENSPPAG00000043403	-	99	86.111	Pan_paniscus
ENSSLDG00000016895	-	99	76.113	ENSPPRG00000004238	-	92	84.946	Panthera_pardus
ENSSLDG00000016895	-	99	76.113	ENSPTRG00000049077	SRSF1	99	86.111	Pan_troglodytes
ENSSLDG00000016895	-	99	60.656	ENSPANG00000030275	-	92	57.940	Papio_anubis
ENSSLDG00000016895	-	99	76.113	ENSPANG00000022305	-	99	86.111	Papio_anubis
ENSSLDG00000016895	-	79	85.027	ENSPKIG00000007204	srsf1a	97	75.983	Paramormyrops_kingsleyae
ENSSLDG00000016895	-	78	87.097	ENSPKIG00000012857	srsf1b	95	78.112	Paramormyrops_kingsleyae
ENSSLDG00000016895	-	78	76.720	ENSPSIG00000009000	-	95	71.429	Pelodiscus_sinensis
ENSSLDG00000016895	-	77	80.978	ENSPMGG00000013112	-	98	70.306	Periophthalmus_magnuspinnatus
ENSSLDG00000016895	-	78	80.645	ENSPMGG00000005467	-	95	72.103	Periophthalmus_magnuspinnatus
ENSSLDG00000016895	-	99	76.113	ENSPEMG00000021416	Srsf1	95	76.695	Peromyscus_maniculatus_bairdii
ENSSLDG00000016895	-	78	84.574	ENSPCIG00000006076	-	95	76.371	Phascolarctos_cinereus
ENSSLDG00000016895	-	77	83.243	ENSPFOG00000018325	-	82	75.652	Poecilia_formosa
ENSSLDG00000016895	-	77	83.243	ENSPLAG00000008416	srsf1b	93	75.652	Poecilia_latipinna
ENSSLDG00000016895	-	52	82.258	ENSPMEG00000014312	-	98	79.508	Poecilia_mexicana
ENSSLDG00000016895	-	52	82.258	ENSPMEG00000020607	-	98	79.508	Poecilia_mexicana
ENSSLDG00000016895	-	77	83.243	ENSPMEG00000002388	-	93	75.652	Poecilia_mexicana
ENSSLDG00000016895	-	77	83.696	ENSPREG00000009667	srsf1a	74	80.978	Poecilia_reticulata
ENSSLDG00000016895	-	99	76.113	ENSPPYG00000008240	SRSF1	95	76.695	Pongo_abelii
ENSSLDG00000016895	-	78	83.422	ENSPCAG00000005199	SRSF1	95	76.695	Procavia_capensis
ENSSLDG00000016895	-	78	67.368	ENSPCOG00000025736	-	90	66.316	Propithecus_coquereli
ENSSLDG00000016895	-	99	76.113	ENSPCOG00000023654	-	99	86.111	Propithecus_coquereli
ENSSLDG00000016895	-	51	92.982	ENSPVAG00000000519	-	67	86.154	Pteropus_vampyrus
ENSSLDG00000016895	-	78	86.022	ENSPNAG00000014601	srsf1b	95	76.395	Pygocentrus_nattereri
ENSSLDG00000016895	-	77	86.339	ENSPNAG00000022241	srsf1a	94	75.431	Pygocentrus_nattereri
ENSSLDG00000016895	-	78	83.422	ENSRNOG00000050323	Srsf1	95	76.695	Rattus_norvegicus
ENSSLDG00000016895	-	99	76.113	ENSRBIG00000034445	-	99	86.111	Rhinopithecus_bieti
ENSSLDG00000016895	-	99	76.113	ENSRROG00000041506	-	99	86.111	Rhinopithecus_roxellana
ENSSLDG00000016895	-	99	76.113	ENSSBOG00000025377	-	99	86.111	Saimiri_boliviensis_boliviensis
ENSSLDG00000016895	-	78	84.574	ENSSHAG00000002552	-	95	76.371	Sarcophilus_harrisii
ENSSLDG00000016895	-	77	86.885	ENSSFOG00015004800	srsf1a	94	76.496	Scleropages_formosus
ENSSLDG00000016895	-	77	83.152	ENSSMAG00000007018	-	74	80.435	Scophthalmus_maximus
ENSSLDG00000016895	-	78	79.897	ENSSMAG00000009719	-	95	72.016	Scophthalmus_maximus
ENSSLDG00000016895	-	77	83.696	ENSSDUG00000011303	-	98	70.614	Seriola_dumerili
ENSSLDG00000016895	-	100	78.151	ENSSDUG00000003929	-	94	76.000	Seriola_dumerili
ENSSLDG00000016895	-	83	79.293	ENSSARG00000010949	-	67	80.303	Sorex_araneus
ENSSLDG00000016895	-	99	76.518	ENSSPUG00000000804	-	93	85.484	Sphenodon_punctatus
ENSSLDG00000016895	-	77	83.696	ENSSPAG00000022562	-	74	82.609	Stegastes_partitus
ENSSLDG00000016895	-	78	81.910	ENSSPAG00000014152	-	94	74.590	Stegastes_partitus
ENSSLDG00000016895	-	99	76.113	ENSSSCG00000017626	-	95	76.695	Sus_scrofa
ENSSLDG00000016895	-	51	82.927	ENSTGUG00000008416	-	93	73.837	Taeniopygia_guttata
ENSSLDG00000016895	-	77	83.696	ENSTRUG00000003691	srsf1a	74	80.978	Takifugu_rubripes
ENSSLDG00000016895	-	78	83.243	ENSTNIG00000016223	srsf1a	74	80.541	Tetraodon_nigroviridis
ENSSLDG00000016895	-	77	82.162	ENSTBEG00000015378	-	63	83.243	Tupaia_belangeri
ENSSLDG00000016895	-	51	81.967	ENSTTRG00000007310	SRSF1	93	73.099	Tursiops_truncatus
ENSSLDG00000016895	-	78	83.422	ENSUAMG00000009858	SRSF1	95	76.695	Ursus_americanus
ENSSLDG00000016895	-	99	76.113	ENSUMAG00000000455	-	93	76.695	Ursus_maritimus
ENSSLDG00000016895	-	78	82.888	ENSVPAG00000010094	SRSF1	95	76.271	Vicugna_pacos
ENSSLDG00000016895	-	99	76.113	ENSVVUG00000011882	-	93	76.695	Vulpes_vulpes
ENSSLDG00000016895	-	78	84.409	ENSXETG00000008954	srsf1	95	70.980	Xenopus_tropicalis
ENSSLDG00000016895	-	77	83.696	ENSXMAG00000011766	srsf1a	74	80.978	Xiphophorus_maculatus