EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000016974 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 2183 bases
Position: chrPEQF01099472.1:70017-72199
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000021728	zf-CCHC_2	PF13696.6	4.6e-07	1	1
ENSSLDP00000021728	zf-CCHC	PF00098.23	9.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000022442	-	615	-	ENSSLDP00000021728	204 (aa)	-	-

Gene Model

Click here to download ENSSLDG00000016974's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000016974's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000016974	-	99	64.390	ENSSLDG00000023195	-	84	64.390

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000016974	-	99	81.188	ENSAPOG00000015723	-	98	81.188	Acanthochromis_polyacanthus
ENSSLDG00000016974	-	81	60.714	ENSACIG00000015080	-	73	60.714	Amphilophus_citrinellus
ENSSLDG00000016974	-	99	83.251	ENSAOCG00000023269	-	93	83.251	Amphiprion_ocellaris
ENSSLDG00000016974	-	100	93.627	ENSATEG00000003539	-	91	93.627	Anabas_testudineus
ENSSLDG00000016974	-	100	75.362	ENSACLG00000010235	-	95	75.362	Astatotilapia_calliptera
ENSSLDG00000016974	-	99	54.286	ENSCSAVG00000002639	-	90	54.286	Ciona_savignyi
ENSSLDG00000016974	-	95	58.128	ENSCSEG00000015861	-	86	58.128	Cynoglossus_semilaevis
ENSSLDG00000016974	-	81	60.714	ENSELUG00000017972	-	80	60.714	Esox_lucius
ENSSLDG00000016974	-	99	81.281	ENSFHEG00000004408	-	89	82.266	Fundulus_heteroclitus
ENSSLDG00000016974	-	99	66.829	ENSGMOG00000006417	-	94	66.829	Gadus_morhua
ENSSLDG00000016974	-	99	67.619	ENSGMOG00000004819	-	86	69.524	Gadus_morhua
ENSSLDG00000016974	-	99	65.366	ENSGACG00000016781	-	85	65.366	Gasterosteus_aculeatus
ENSSLDG00000016974	-	99	78.325	ENSHCOG00000015620	-	97	78.325	Hippocampus_comes
ENSSLDG00000016974	-	99	55.122	ENSLBEG00000004625	-	70	55.122	Labrus_bergylta
ENSSLDG00000016974	-	100	88.293	ENSMAMG00000004136	-	100	88.293	Mastacembelus_armatus
ENSSLDG00000016974	-	97	62.500	ENSMAMG00000009045	-	87	62.500	Mastacembelus_armatus
ENSSLDG00000016974	-	100	75.362	ENSMZEG00005007792	-	95	75.362	Maylandia_zebra
ENSSLDG00000016974	-	100	80.392	ENSMMOG00000012378	-	85	80.392	Mola_mola
ENSSLDG00000016974	-	99	61.951	ENSMMOG00000003895	-	81	61.951	Mola_mola
ENSSLDG00000016974	-	99	85.149	ENSMALG00000018253	-	80	85.149	Monopterus_albus
ENSSLDG00000016974	-	99	81.188	ENSONIG00000015704	-	86	81.188	Oreochromis_niloticus
ENSSLDG00000016974	-	99	84.729	ENSORLG00015021920	-	96	84.729	Oryzias_latipes_hsok
ENSSLDG00000016974	-	99	84.653	ENSOMEG00000020721	-	80	84.653	Oryzias_melastigma
ENSSLDG00000016974	-	99	64.563	ENSPMGG00000002101	-	87	64.563	Periophthalmus_magnuspinnatus
ENSSLDG00000016974	-	100	66.505	ENSPMAG00000009464	-	86	66.505	Petromyzon_marinus
ENSSLDG00000016974	-	99	64.078	ENSPFOG00000022154	-	50	64.500	Poecilia_formosa
ENSSLDG00000016974	-	100	75.362	ENSPNYG00000018879	-	95	75.362	Pundamilia_nyererei
ENSSLDG00000016974	-	99	65.534	ENSPNYG00000014384	-	84	65.534	Pundamilia_nyererei
ENSSLDG00000016974	-	100	93.137	ENSSMAG00000008324	-	88	93.137	Scophthalmus_maximus
ENSSLDG00000016974	-	100	100.000	ENSSDUG00000015232	-	99	100.000	Seriola_dumerili
ENSSLDG00000016974	-	99	75.743	ENSTRUG00000010008	-	85	75.743	Takifugu_rubripes
ENSSLDG00000016974	-	98	76.500	ENSTNIG00000011614	-	93	76.500	Tetraodon_nigroviridis
ENSSLDG00000016974	-	98	66.832	ENSTNIG00000005451	-	84	66.832	Tetraodon_nigroviridis