EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000017052 (Gene tree)
Gene ID: -
Gene Symbol: sar1b
Alias: sara2|zgc:73204
Full Name: secretion associated Ras related GTPase 1B
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 10839 bases
Position: chrPEQF01098981.1:747119-757957
Accession: 111659972
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000021831	MMR_HSR1	PF01926.23	5.1e-05	1	1
ENSSLDP00000021851	MMR_HSR1	PF01926.23	6.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000022545	-	3791	XM_023413072	ENSSLDP00000021831	198 (aa)	XP_023268840	UPI000BBE33FC
ENSSLDT00000022565	-	348	-	ENSSLDP00000021851	115 (aa)	-	-

Gene Model

Click here to download ENSSLDG00000017052's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000017052's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000017052	sar1b	84	34.021	ENSSLDG00000025143	arf3b	53	34.021
ENSSLDG00000017052	sar1b	88	31.111	ENSSLDG00000005628	arl4d	84	31.111
ENSSLDG00000017052	sar1b	94	31.053	ENSSLDG00000000746	ARL6	96	31.053
ENSSLDG00000017052	sar1b	93	30.270	ENSSLDG00000003967	arl3l2	89	30.270
ENSSLDG00000017052	sar1b	83	35.417	ENSSLDG00000000124	arl2	52	35.417
ENSSLDG00000017052	sar1b	71	36.782	ENSSLDG00000015190	arl4aa	69	31.852
ENSSLDG00000017052	sar1b	76	30.464	ENSSLDG00000001636	-	55	30.464
ENSSLDG00000017052	sar1b	79	35.484	ENSSLDG00000023797	ARL6	64	31.579
ENSSLDG00000017052	sar1b	71	36.364	ENSSLDG00000012798	-	71	33.333
ENSSLDG00000017052	sar1b	87	36.190	ENSSLDG00000017889	arl4cb	76	31.333
ENSSLDG00000017052	sar1b	87	35.849	ENSSLDG00000012103	-	67	33.094
ENSSLDG00000017052	sar1b	100	84.848	ENSSLDG00000025558	sar1ab	100	84.848
ENSSLDG00000017052	sar1b	78	36.170	ENSSLDG00000013951	-	53	36.170
ENSSLDG00000017052	sar1b	75	34.884	ENSSLDG00000005491	-	86	35.052
ENSSLDG00000017052	sar1b	86	32.584	ENSSLDG00000008208	-	82	32.584
ENSSLDG00000017052	sar1b	84	34.021	ENSSLDG00000005289	-	53	34.021
ENSSLDG00000017052	sar1b	79	35.870	ENSSLDG00000008504	-	51	35.870
ENSSLDG00000017052	sar1b	79	35.870	ENSSLDG00000021639	arf2b	51	35.870
ENSSLDG00000017052	sar1b	94	91.667	ENSSLDG00000024197	-	100	84.848
ENSSLDG00000017052	sar1b	85	32.749	ENSSLDG00000006512	-	77	32.749
ENSSLDG00000017052	sar1b	82	31.579	ENSSLDG00000012946	arl1	54	31.579
ENSSLDG00000017052	sar1b	95	32.110	ENSSLDG00000020097	-	56	32.110
ENSSLDG00000017052	sar1b	85	30.612	ENSSLDG00000009955	-	56	31.373

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000017052	sar1b	100	94.949	ENSAPOG00000007186	sar1b	100	94.949	Acanthochromis_polyacanthus
ENSSLDG00000017052	sar1b	94	92.593	ENSAPOG00000017891	-	100	85.354	Acanthochromis_polyacanthus
ENSSLDG00000017052	sar1b	94	90.741	ENSACIG00000024513	-	100	83.838	Amphilophus_citrinellus
ENSSLDG00000017052	sar1b	100	95.455	ENSACIG00000013634	sar1b	100	95.455	Amphilophus_citrinellus
ENSSLDG00000017052	sar1b	100	95.455	ENSAOCG00000005888	sar1b	100	95.455	Amphiprion_ocellaris
ENSSLDG00000017052	sar1b	94	92.593	ENSAOCG00000002627	-	100	85.354	Amphiprion_ocellaris
ENSSLDG00000017052	sar1b	94	92.593	ENSAPEG00000019680	-	100	85.354	Amphiprion_percula
ENSSLDG00000017052	sar1b	100	95.455	ENSAPEG00000022771	sar1b	100	95.455	Amphiprion_percula
ENSSLDG00000017052	sar1b	100	94.949	ENSATEG00000012904	sar1b	100	94.949	Anabas_testudineus
ENSSLDG00000017052	sar1b	94	90.741	ENSATEG00000023368	-	100	83.838	Anabas_testudineus
ENSSLDG00000017052	sar1b	100	90.909	ENSACAG00000001470	-	100	90.909	Anolis_carolinensis
ENSSLDG00000017052	sar1b	100	94.444	ENSACLG00000014649	sar1b	100	94.444	Astatotilapia_calliptera
ENSSLDG00000017052	sar1b	94	91.667	ENSACLG00000005011	-	100	84.848	Astatotilapia_calliptera
ENSSLDG00000017052	sar1b	100	85.859	ENSAMXG00000034192	-	91	85.859	Astyanax_mexicanus
ENSSLDG00000017052	sar1b	94	95.370	ENSAMXG00000018108	sar1b	84	93.162	Astyanax_mexicanus
ENSSLDG00000017052	sar1b	100	89.899	ENSCSEG00000015238	sar1b	97	89.899	Cynoglossus_semilaevis
ENSSLDG00000017052	sar1b	94	90.741	ENSCSEG00000016976	-	100	84.343	Cynoglossus_semilaevis
ENSSLDG00000017052	sar1b	100	94.444	ENSCVAG00000022959	sar1b	100	94.444	Cyprinodon_variegatus
ENSSLDG00000017052	sar1b	100	93.939	ENSDARG00000103403	sar1b	100	93.939	Danio_rerio
ENSSLDG00000017052	sar1b	99	69.898	FBgn0038947	Sar1	99	69.898	Drosophila_melanogaster
ENSSLDG00000017052	sar1b	97	89.583	ENSEBUG00000011723	sar1b	97	89.583	Eptatretus_burgeri
ENSSLDG00000017052	sar1b	100	94.949	ENSELUG00000020912	sar1b	100	94.949	Esox_lucius
ENSSLDG00000017052	sar1b	100	94.949	ENSFHEG00000019865	sar1b	100	94.949	Fundulus_heteroclitus
ENSSLDG00000017052	sar1b	100	94.444	ENSGMOG00000008023	sar1b	100	94.444	Gadus_morhua
ENSSLDG00000017052	sar1b	100	93.939	ENSGAFG00000007081	sar1b	100	93.939	Gambusia_affinis
ENSSLDG00000017052	sar1b	100	92.424	ENSGACG00000001474	sar1b	100	92.424	Gasterosteus_aculeatus
ENSSLDG00000017052	sar1b	94	91.667	ENSHBUG00000018397	-	100	84.848	Haplochromis_burtoni
ENSSLDG00000017052	sar1b	100	94.444	ENSHBUG00000000915	sar1b	100	94.444	Haplochromis_burtoni
ENSSLDG00000017052	sar1b	100	94.444	ENSHCOG00000010953	sar1b	100	94.444	Hippocampus_comes
ENSSLDG00000017052	sar1b	100	92.424	ENSIPUG00000020925	sar1b	100	92.424	Ictalurus_punctatus
ENSSLDG00000017052	sar1b	94	91.667	ENSIPUG00000010046	sar1b	100	85.354	Ictalurus_punctatus
ENSSLDG00000017052	sar1b	100	85.833	ENSKMAG00000014875	-	100	84.343	Kryptolebias_marmoratus
ENSSLDG00000017052	sar1b	100	95.455	ENSKMAG00000019693	sar1b	100	95.455	Kryptolebias_marmoratus
ENSSLDG00000017052	sar1b	100	92.929	ENSLBEG00000027550	sar1b	100	92.929	Labrus_bergylta
ENSSLDG00000017052	sar1b	94	93.519	ENSLBEG00000016945	-	100	85.859	Labrus_bergylta
ENSSLDG00000017052	sar1b	100	72.864	ENSLACG00000017029	-	100	72.864	Latimeria_chalumnae
ENSSLDG00000017052	sar1b	100	87.374	ENSLACG00000010795	sar1b	100	87.374	Latimeria_chalumnae
ENSSLDG00000017052	sar1b	100	90.909	ENSLOCG00000005214	-	100	90.909	Lepisosteus_oculatus
ENSSLDG00000017052	sar1b	100	93.434	ENSLOCG00000010197	sar1b	100	93.434	Lepisosteus_oculatus
ENSSLDG00000017052	sar1b	100	94.949	ENSMAMG00000021732	sar1b	100	94.949	Mastacembelus_armatus
ENSSLDG00000017052	sar1b	94	91.667	ENSMZEG00005001012	-	100	84.848	Maylandia_zebra
ENSSLDG00000017052	sar1b	100	94.444	ENSMZEG00005008942	sar1b	100	94.444	Maylandia_zebra
ENSSLDG00000017052	sar1b	90	92.179	ENSMGAG00000005387	-	91	92.179	Meleagris_gallopavo
ENSSLDG00000017052	sar1b	94	91.667	ENSMMOG00000013803	-	100	84.343	Mola_mola
ENSSLDG00000017052	sar1b	100	95.455	ENSMALG00000016635	sar1b	97	93.407	Monopterus_albus
ENSSLDG00000017052	sar1b	94	91.667	ENSNBRG00000014004	-	100	84.848	Neolamprologus_brichardi
ENSSLDG00000017052	sar1b	100	94.949	ENSNBRG00000008013	sar1b	100	94.949	Neolamprologus_brichardi
ENSSLDG00000017052	sar1b	100	95.960	ENSONIG00000017278	sar1b	100	95.960	Oreochromis_niloticus
ENSSLDG00000017052	sar1b	100	93.939	ENSORLG00000000932	sar1b	100	93.939	Oryzias_latipes
ENSSLDG00000017052	sar1b	100	93.939	ENSORLG00020021985	sar1b	100	93.939	Oryzias_latipes_hni
ENSSLDG00000017052	sar1b	100	93.939	ENSORLG00015007044	sar1b	100	93.939	Oryzias_latipes_hsok
ENSSLDG00000017052	sar1b	100	94.444	ENSOMEG00000001052	sar1b	100	94.444	Oryzias_melastigma
ENSSLDG00000017052	sar1b	100	93.434	ENSPKIG00000010688	sar1b	100	93.434	Paramormyrops_kingsleyae
ENSSLDG00000017052	sar1b	100	93.939	ENSPKIG00000017353	-	100	93.939	Paramormyrops_kingsleyae
ENSSLDG00000017052	sar1b	94	95.370	ENSPMGG00000001234	sar1b	91	95.690	Periophthalmus_magnuspinnatus
ENSSLDG00000017052	sar1b	100	85.075	ENSPMAG00000003593	sar1b	100	85.075	Petromyzon_marinus
ENSSLDG00000017052	sar1b	100	93.939	ENSPFOG00000005666	sar1b	100	93.939	Poecilia_formosa
ENSSLDG00000017052	sar1b	94	89.815	ENSPLAG00000001016	-	75	88.034	Poecilia_latipinna
ENSSLDG00000017052	sar1b	100	94.444	ENSPLAG00000012223	sar1b	100	94.444	Poecilia_latipinna
ENSSLDG00000017052	sar1b	100	93.939	ENSPMEG00000016831	sar1b	100	93.939	Poecilia_mexicana
ENSSLDG00000017052	sar1b	94	89.815	ENSPREG00000002020	-	87	87.288	Poecilia_reticulata
ENSSLDG00000017052	sar1b	100	93.939	ENSPREG00000005312	sar1b	90	93.939	Poecilia_reticulata
ENSSLDG00000017052	sar1b	100	94.444	ENSPNYG00000012440	sar1b	100	94.444	Pundamilia_nyererei
ENSSLDG00000017052	sar1b	94	91.667	ENSPNYG00000021357	-	100	84.848	Pundamilia_nyererei
ENSSLDG00000017052	sar1b	100	93.434	ENSPNAG00000014683	sar1b	100	93.434	Pygocentrus_nattereri
ENSSLDG00000017052	sar1b	100	86.869	ENSPNAG00000001123	-	100	86.869	Pygocentrus_nattereri
ENSSLDG00000017052	sar1b	100	92.424	ENSSFOG00015018128	-	100	92.424	Scleropages_formosus
ENSSLDG00000017052	sar1b	100	93.434	ENSSFOG00015020051	sar1b	100	93.434	Scleropages_formosus
ENSSLDG00000017052	sar1b	100	93.434	ENSSMAG00000007106	sar1b	80	93.434	Scophthalmus_maximus
ENSSLDG00000017052	sar1b	100	85.354	ENSSMAG00000002165	-	100	85.354	Scophthalmus_maximus
ENSSLDG00000017052	sar1b	100	100.000	ENSSDUG00000020926	sar1b	100	100.000	Seriola_dumerili
ENSSLDG00000017052	sar1b	94	91.667	ENSSDUG00000019629	-	100	84.848	Seriola_dumerili
ENSSLDG00000017052	sar1b	100	90.404	ENSSPUG00000010247	-	100	90.404	Sphenodon_punctatus
ENSSLDG00000017052	sar1b	100	95.455	ENSSPAG00000017634	sar1b	100	95.455	Stegastes_partitus
ENSSLDG00000017052	sar1b	94	92.593	ENSSPAG00000015626	-	100	84.848	Stegastes_partitus
ENSSLDG00000017052	sar1b	100	90.909	ENSTRUG00000023908	sar1b	100	90.909	Takifugu_rubripes
ENSSLDG00000017052	sar1b	100	92.424	ENSTNIG00000016097	sar1b	100	92.424	Tetraodon_nigroviridis
ENSSLDG00000017052	sar1b	94	89.815	ENSXCOG00000006154	-	81	85.000	Xiphophorus_couchianus
ENSSLDG00000017052	sar1b	90	93.820	ENSXCOG00000004160	sar1b	87	93.820	Xiphophorus_couchianus
ENSSLDG00000017052	sar1b	100	93.939	ENSXMAG00000008294	sar1b	100	93.939	Xiphophorus_maculatus