EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSLDG00000017096 (Gene tree)
Gene ID: -
Gene Symbol: prpf8
Alias: id:ibd1257|ik:tdsubc_2a9|im:7141966|tdsubc_2a9|wu:fb37c02|wu:fb73e06|xx:tdsubc_2a9|zgc:56504
Full Name: pre-mRNA processing factor 8
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 11334 bases
Position: chrPEQF01099182.1:307804-319137
Accession: 111668143
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000021912	RRM_4	PF10598.9	1.9e-48	1	1
ENSSLDP00000021912	U5_2-snRNA_bdg	PF10597.9	4.6e-74	1	1
ENSSLDP00000021912	U6-snRNA_bdg	PF10596.9	1.1e-89	1	1
ENSSLDP00000021912	PROCN	PF08083.11	1.5e-28	1	1
ENSSLDP00000021912	PRP8_domainIV	PF12134.8	2.5e-130	1	1
ENSSLDP00000021912	PROCT	PF08084.11	1.6e-53	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000022629	-	4850	XM_023424104	ENSSLDP00000021912	1598 (aa)	XP_023279872	-

Gene Model

Click here to download ENSSLDG00000017096's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000017096's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000017096	prpf8	100	98.936	ENSG00000174231	PRPF8	82	100.000	Homo_sapiens
ENSSLDG00000017096	prpf8	100	100.000	ENSAPOG00000010079	prpf8	68	100.000	Acanthochromis_polyacanthus
ENSSLDG00000017096	prpf8	100	98.936	ENSAMEG00000007940	PRPF8	68	98.936	Ailuropoda_melanoleuca
ENSSLDG00000017096	prpf8	100	97.567	ENSACIG00000018280	prpf8	68	97.567	Amphilophus_citrinellus
ENSSLDG00000017096	prpf8	100	100.000	ENSAOCG00000010725	prpf8	68	100.000	Amphiprion_ocellaris
ENSSLDG00000017096	prpf8	100	100.000	ENSAPEG00000014397	prpf8	68	100.000	Amphiprion_percula
ENSSLDG00000017096	prpf8	100	99.061	ENSATEG00000010062	prpf8	68	99.061	Anabas_testudineus
ENSSLDG00000017096	prpf8	100	98.874	ENSAPLG00000010357	PRPF8	71	98.874	Anas_platyrhynchos
ENSSLDG00000017096	prpf8	75	96.758	ENSACAG00000014784	PRPF8	62	96.758	Anolis_carolinensis
ENSSLDG00000017096	prpf8	100	98.936	ENSANAG00000032629	PRPF8	68	98.936	Aotus_nancymaae
ENSSLDG00000017096	prpf8	100	99.812	ENSACLG00000020858	prpf8	69	99.812	Astatotilapia_calliptera
ENSSLDG00000017096	prpf8	100	99.562	ENSAMXG00000020291	prpf8	68	99.562	Astyanax_mexicanus
ENSSLDG00000017096	prpf8	100	98.936	ENSBTAG00000011488	PRPF8	68	98.936	Bos_taurus
ENSSLDG00000017096	prpf8	100	88.062	WBGene00004187	prp-8	69	88.062	Caenorhabditis_elegans
ENSSLDG00000017096	prpf8	100	98.936	ENSCJAG00000001911	PRPF8	68	98.936	Callithrix_jacchus
ENSSLDG00000017096	prpf8	100	98.936	ENSCAFG00000019221	PRPF8	68	98.936	Canis_familiaris
ENSSLDG00000017096	prpf8	100	98.936	ENSCAFG00020009943	PRPF8	71	98.936	Canis_lupus_dingo
ENSSLDG00000017096	prpf8	100	98.936	ENSCHIG00000017499	PRPF8	68	98.936	Capra_hircus
ENSSLDG00000017096	prpf8	100	98.936	ENSTSYG00000014120	PRPF8	68	98.936	Carlito_syrichta
ENSSLDG00000017096	prpf8	100	95.807	ENSCAPG00000009459	PRPF8	71	95.807	Cavia_aperea
ENSSLDG00000017096	prpf8	100	98.936	ENSCPOG00000010379	PRPF8	68	98.936	Cavia_porcellus
ENSSLDG00000017096	prpf8	100	98.936	ENSCCAG00000031983	-	68	98.936	Cebus_capucinus
ENSSLDG00000017096	prpf8	100	98.936	ENSCATG00000038595	PRPF8	68	98.936	Cercocebus_atys
ENSSLDG00000017096	prpf8	100	98.936	ENSCLAG00000004388	PRPF8	68	98.936	Chinchilla_lanigera
ENSSLDG00000017096	prpf8	100	98.936	ENSCSAG00000013929	PRPF8	68	98.936	Chlorocebus_sabaeus
ENSSLDG00000017096	prpf8	84	97.333	ENSCHOG00000008590	PRPF8	62	97.333	Choloepus_hoffmanni
ENSSLDG00000017096	prpf8	100	98.874	ENSCPBG00000020409	PRPF8	68	98.874	Chrysemys_picta_bellii
ENSSLDG00000017096	prpf8	100	94.678	ENSCSAVG00000007825	-	100	90.365	Ciona_savignyi
ENSSLDG00000017096	prpf8	100	98.936	ENSCANG00000043088	PRPF8	68	98.936	Colobus_angolensis_palliatus
ENSSLDG00000017096	prpf8	79	99.409	ENSCGRG00000005129	Prpf8	73	99.409	Cricetulus_griseus_crigri
ENSSLDG00000017096	prpf8	100	99.687	ENSCSEG00000007905	prpf8	68	99.687	Cynoglossus_semilaevis
ENSSLDG00000017096	prpf8	100	99.687	ENSDARG00000026180	prpf8	68	99.687	Danio_rerio
ENSSLDG00000017096	prpf8	90	99.233	ENSDNOG00000018471	PRPF8	66	99.233	Dasypus_novemcinctus
ENSSLDG00000017096	prpf8	76	98.946	ENSDORG00000006185	Prpf8	58	98.946	Dipodomys_ordii
ENSSLDG00000017096	prpf8	100	93.746	FBgn0033688	Prp8	67	93.746	Drosophila_melanogaster
ENSSLDG00000017096	prpf8	100	94.305	ENSETEG00000017592	PRPF8	68	94.305	Echinops_telfairi
ENSSLDG00000017096	prpf8	100	94.305	ENSEBUG00000006548	prpf8	68	94.305	Eptatretus_burgeri
ENSSLDG00000017096	prpf8	100	98.936	ENSEASG00005009514	PRPF8	70	98.936	Equus_asinus_asinus
ENSSLDG00000017096	prpf8	100	98.936	ENSECAG00000021318	PRPF8	70	98.936	Equus_caballus
ENSSLDG00000017096	prpf8	79	97.682	ENSEEUG00000012120	-	54	97.682	Erinaceus_europaeus
ENSSLDG00000017096	prpf8	97	97.868	ENSELUG00000007120	prpf8	67	97.868	Esox_lucius
ENSSLDG00000017096	prpf8	100	98.936	ENSFCAG00000006297	PRPF8	68	98.936	Felis_catus
ENSSLDG00000017096	prpf8	100	98.874	ENSFALG00000006628	PRPF8	68	98.874	Ficedula_albicollis
ENSSLDG00000017096	prpf8	100	98.936	ENSFDAG00000004711	PRPF8	68	98.936	Fukomys_damarensis
ENSSLDG00000017096	prpf8	100	99.499	ENSFHEG00000021084	prpf8	68	99.499	Fundulus_heteroclitus
ENSSLDG00000017096	prpf8	100	96.552	ENSGMOG00000002028	prpf8	69	96.552	Gadus_morhua
ENSSLDG00000017096	prpf8	100	98.874	ENSGALG00000002943	PRPF8	68	98.874	Gallus_gallus
ENSSLDG00000017096	prpf8	100	99.687	ENSGAFG00000010337	prpf8	68	99.687	Gambusia_affinis
ENSSLDG00000017096	prpf8	100	99.875	ENSGACG00000008504	prpf8	68	99.875	Gasterosteus_aculeatus
ENSSLDG00000017096	prpf8	100	98.874	ENSGAGG00000008350	PRPF8	68	98.874	Gopherus_agassizii
ENSSLDG00000017096	prpf8	100	98.936	ENSGGOG00000005516	PRPF8	68	98.936	Gorilla_gorilla
ENSSLDG00000017096	prpf8	100	99.812	ENSHBUG00000016192	prpf8	68	99.812	Haplochromis_burtoni
ENSSLDG00000017096	prpf8	100	98.936	ENSHGLG00000012029	PRPF8	68	98.936	Heterocephalus_glaber_female
ENSSLDG00000017096	prpf8	100	98.936	ENSHGLG00100016494	PRPF8	68	98.936	Heterocephalus_glaber_male
ENSSLDG00000017096	prpf8	100	99.812	ENSHCOG00000016414	prpf8	68	99.812	Hippocampus_comes
ENSSLDG00000017096	prpf8	100	99.499	ENSIPUG00000023230	prpf8	68	99.499	Ictalurus_punctatus
ENSSLDG00000017096	prpf8	100	98.936	ENSSTOG00000005128	PRPF8	68	98.936	Ictidomys_tridecemlineatus
ENSSLDG00000017096	prpf8	100	95.807	ENSJJAG00000021159	Prpf8	68	95.807	Jaculus_jaculus
ENSSLDG00000017096	prpf8	100	99.687	ENSKMAG00000016118	prpf8	68	99.687	Kryptolebias_marmoratus
ENSSLDG00000017096	prpf8	100	99.812	ENSLBEG00000026903	prpf8	68	99.812	Labrus_bergylta
ENSSLDG00000017096	prpf8	93	98.851	ENSLACG00000010479	PRPF8	71	98.851	Latimeria_chalumnae
ENSSLDG00000017096	prpf8	100	99.562	ENSLOCG00000005409	prpf8	68	99.562	Lepisosteus_oculatus
ENSSLDG00000017096	prpf8	100	98.936	ENSLAFG00000015445	PRPF8	68	98.936	Loxodonta_africana
ENSSLDG00000017096	prpf8	100	98.936	ENSMFAG00000039995	PRPF8	68	98.936	Macaca_fascicularis
ENSSLDG00000017096	prpf8	100	98.936	ENSMMUG00000004820	PRPF8	68	98.936	Macaca_mulatta
ENSSLDG00000017096	prpf8	100	98.936	ENSMNEG00000035713	PRPF8	68	98.936	Macaca_nemestrina
ENSSLDG00000017096	prpf8	100	98.936	ENSMLEG00000037937	PRPF8	68	98.936	Mandrillus_leucophaeus
ENSSLDG00000017096	prpf8	100	99.875	ENSMAMG00000008919	prpf8	68	99.875	Mastacembelus_armatus
ENSSLDG00000017096	prpf8	100	99.812	ENSMZEG00005015073	prpf8	68	99.812	Maylandia_zebra
ENSSLDG00000017096	prpf8	100	98.874	ENSMGAG00000004769	PRPF8	68	98.874	Meleagris_gallopavo
ENSSLDG00000017096	prpf8	100	98.936	ENSMICG00000010320	PRPF8	68	98.936	Microcebus_murinus
ENSSLDG00000017096	prpf8	100	98.936	ENSMOCG00000016838	Prpf8	68	98.936	Microtus_ochrogaster
ENSSLDG00000017096	prpf8	100	99.937	ENSMMOG00000011887	prpf8	69	99.937	Mola_mola
ENSSLDG00000017096	prpf8	100	98.811	ENSMODG00000010480	PRPF8	68	98.811	Monodelphis_domestica
ENSSLDG00000017096	prpf8	94	100.000	ENSMALG00000003558	prpf8	67	100.000	Monopterus_albus
ENSSLDG00000017096	prpf8	100	98.874	MGP_CAROLIEiJ_G0016740	Prpf8	68	98.874	Mus_caroli
ENSSLDG00000017096	prpf8	100	98.874	ENSMUSG00000020850	Prpf8	68	98.874	Mus_musculus
ENSSLDG00000017096	prpf8	100	98.874	MGP_PahariEiJ_G0017877	Prpf8	68	98.874	Mus_pahari
ENSSLDG00000017096	prpf8	100	98.874	MGP_SPRETEiJ_G0017583	Prpf8	68	98.874	Mus_spretus
ENSSLDG00000017096	prpf8	100	98.936	ENSMPUG00000013227	PRPF8	68	98.936	Mustela_putorius_furo
ENSSLDG00000017096	prpf8	100	98.813	ENSMLUG00000002666	PRPF8	68	98.813	Myotis_lucifugus
ENSSLDG00000017096	prpf8	100	96.433	ENSNGAG00000005305	Prpf8	68	96.433	Nannospalax_galili
ENSSLDG00000017096	prpf8	100	99.812	ENSNBRG00000013127	prpf8	68	99.812	Neolamprologus_brichardi
ENSSLDG00000017096	prpf8	100	97.059	ENSNLEG00000000897	PRPF8	69	97.059	Nomascus_leucogenys
ENSSLDG00000017096	prpf8	100	96.183	ENSMEUG00000015999	PRPF8	69	96.183	Notamacropus_eugenii
ENSSLDG00000017096	prpf8	100	98.936	ENSOPRG00000003102	PRPF8	69	98.936	Ochotona_princeps
ENSSLDG00000017096	prpf8	100	98.936	ENSODEG00000008468	PRPF8	68	98.936	Octodon_degus
ENSSLDG00000017096	prpf8	100	99.750	ENSONIG00000008153	prpf8	68	99.750	Oreochromis_niloticus
ENSSLDG00000017096	prpf8	83	99.159	ENSOANG00000004250	PRPF8	68	99.159	Ornithorhynchus_anatinus
ENSSLDG00000017096	prpf8	100	98.936	ENSOCUG00000000081	PRPF8	68	98.936	Oryctolagus_cuniculus
ENSSLDG00000017096	prpf8	100	99.812	ENSORLG00000008036	prpf8	68	99.812	Oryzias_latipes
ENSSLDG00000017096	prpf8	100	99.750	ENSORLG00020021070	prpf8	68	99.750	Oryzias_latipes_hni
ENSSLDG00000017096	prpf8	100	99.812	ENSORLG00015002340	prpf8	68	99.812	Oryzias_latipes_hsok
ENSSLDG00000017096	prpf8	100	97.434	ENSOMEG00000016866	prpf8	68	97.434	Oryzias_melastigma
ENSSLDG00000017096	prpf8	100	98.751	ENSOARG00000013312	PRPF8	68	98.751	Ovis_aries
ENSSLDG00000017096	prpf8	100	98.936	ENSPPAG00000042753	PRPF8	68	98.936	Pan_paniscus
ENSSLDG00000017096	prpf8	100	98.936	ENSPPRG00000008746	PRPF8	68	98.936	Panthera_pardus
ENSSLDG00000017096	prpf8	100	98.811	ENSPTIG00000019200	PRPF8	68	98.811	Panthera_tigris_altaica
ENSSLDG00000017096	prpf8	100	98.936	ENSPTRG00000039576	PRPF8	68	98.936	Pan_troglodytes
ENSSLDG00000017096	prpf8	100	98.936	ENSPANG00000024607	PRPF8	68	98.936	Papio_anubis
ENSSLDG00000017096	prpf8	100	99.562	ENSPKIG00000011201	prpf8	68	99.562	Paramormyrops_kingsleyae
ENSSLDG00000017096	prpf8	100	98.811	ENSPSIG00000013393	PRPF8	68	98.811	Pelodiscus_sinensis
ENSSLDG00000017096	prpf8	100	98.936	ENSPEMG00000021699	Prpf8	68	98.936	Peromyscus_maniculatus_bairdii
ENSSLDG00000017096	prpf8	100	96.245	ENSPMAG00000005438	prpf8	71	96.245	Petromyzon_marinus
ENSSLDG00000017096	prpf8	100	98.811	ENSPCIG00000022603	PRPF8	71	98.811	Phascolarctos_cinereus
ENSSLDG00000017096	prpf8	100	99.687	ENSPFOG00000007005	prpf8	68	99.687	Poecilia_formosa
ENSSLDG00000017096	prpf8	100	99.687	ENSPLAG00000020777	prpf8	69	99.687	Poecilia_latipinna
ENSSLDG00000017096	prpf8	100	99.687	ENSPMEG00000004051	prpf8	69	99.687	Poecilia_mexicana
ENSSLDG00000017096	prpf8	100	99.625	ENSPREG00000021902	prpf8	68	99.625	Poecilia_reticulata
ENSSLDG00000017096	prpf8	100	98.936	ENSPPYG00000007777	PRPF8	68	98.936	Pongo_abelii
ENSSLDG00000017096	prpf8	85	99.115	ENSPCAG00000008938	PRPF8	58	99.115	Procavia_capensis
ENSSLDG00000017096	prpf8	100	98.936	ENSPCOG00000015182	PRPF8	68	98.936	Propithecus_coquereli
ENSSLDG00000017096	prpf8	95	98.744	ENSPVAG00000002134	PRPF8	65	98.744	Pteropus_vampyrus
ENSSLDG00000017096	prpf8	100	99.812	ENSPNYG00000016356	prpf8	68	99.812	Pundamilia_nyererei
ENSSLDG00000017096	prpf8	100	99.437	ENSPNAG00000009247	prpf8	68	99.437	Pygocentrus_nattereri
ENSSLDG00000017096	prpf8	100	98.874	ENSRNOG00000003495	Prpf8	68	98.874	Rattus_norvegicus
ENSSLDG00000017096	prpf8	100	98.936	ENSRBIG00000031219	PRPF8	71	98.310	Rhinopithecus_bieti
ENSSLDG00000017096	prpf8	100	98.936	ENSRROG00000038014	PRPF8	71	98.310	Rhinopithecus_roxellana
ENSSLDG00000017096	prpf8	100	63.873	YHR165C	PRP8	66	63.873	Saccharomyces_cerevisiae
ENSSLDG00000017096	prpf8	100	98.936	ENSSBOG00000029717	PRPF8	68	98.936	Saimiri_boliviensis_boliviensis
ENSSLDG00000017096	prpf8	100	98.748	ENSSHAG00000006167	PRPF8	68	98.748	Sarcophilus_harrisii
ENSSLDG00000017096	prpf8	100	99.625	ENSSFOG00015013905	prpf8	68	99.625	Scleropages_formosus
ENSSLDG00000017096	prpf8	100	99.875	ENSSMAG00000017736	prpf8	68	99.875	Scophthalmus_maximus
ENSSLDG00000017096	prpf8	100	100.000	ENSSDUG00000003029	prpf8	68	100.000	Seriola_dumerili
ENSSLDG00000017096	prpf8	86	94.626	ENSSARG00000002892	PRPF8	59	94.626	Sorex_araneus
ENSSLDG00000017096	prpf8	100	98.874	ENSSPUG00000007463	PRPF8	68	98.874	Sphenodon_punctatus
ENSSLDG00000017096	prpf8	100	99.124	ENSSPAG00000015639	prpf8	68	99.124	Stegastes_partitus
ENSSLDG00000017096	prpf8	100	98.936	ENSSSCG00000017817	PRPF8	68	98.936	Sus_scrofa
ENSSLDG00000017096	prpf8	100	98.874	ENSTGUG00000005648	-	68	98.874	Taeniopygia_guttata
ENSSLDG00000017096	prpf8	100	99.499	ENSTRUG00000015906	prpf8	68	99.499	Takifugu_rubripes
ENSSLDG00000017096	prpf8	100	99.562	ENSTNIG00000003460	prpf8	72	99.562	Tetraodon_nigroviridis
ENSSLDG00000017096	prpf8	94	99.271	ENSTBEG00000006431	PRPF8	64	99.271	Tupaia_belangeri
ENSSLDG00000017096	prpf8	100	98.185	ENSTTRG00000006869	PRPF8	68	98.185	Tursiops_truncatus
ENSSLDG00000017096	prpf8	61	98.979	ENSUAMG00000028213	-	100	98.979	Ursus_americanus
ENSSLDG00000017096	prpf8	100	98.936	ENSUMAG00000009385	PRPF8	69	98.936	Ursus_maritimus
ENSSLDG00000017096	prpf8	83	97.030	ENSVPAG00000006063	-	57	97.030	Vicugna_pacos
ENSSLDG00000017096	prpf8	100	98.936	ENSVVUG00000021695	PRPF8	68	98.936	Vulpes_vulpes
ENSSLDG00000017096	prpf8	100	98.624	ENSXETG00000022259	prpf8	68	98.624	Xenopus_tropicalis
ENSSLDG00000017096	prpf8	100	99.687	ENSXCOG00000012775	prpf8	68	99.687	Xiphophorus_couchianus
ENSSLDG00000017096	prpf8	100	99.625	ENSXMAG00000008505	prpf8	68	99.625	Xiphophorus_maculatus