EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000017182 (Gene tree)
Gene ID: -
Gene Symbol: rbm4.3 (1 of many)
Alias: -
Full Name: RNA-binding protein 4B-like
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 1831 bases
Position: chrPEQF01099455.1:212797-214627
Accession: 111646995
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000022006	RRM_5	PF13893.6	2.2e-10	1	2
ENSSLDP00000022006	RRM_5	PF13893.6	2.2e-10	2	2
ENSSLDP00000022006	RRM_1	PF00076.22	2.9e-26	1	2
ENSSLDP00000022006	RRM_1	PF00076.22	2.9e-26	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000022726	-	1205	XM_023396605	ENSSLDP00000022006	340 (aa)	XP_023252373	UPI000C6FBCB5

Gene Model

Click here to download ENSSLDG00000017182's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000017182's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000017182	rbm4.3	51	48.588	ENSSLDG00000013157	-	99	40.665
ENSSLDG00000017182	rbm4.3	91	55.696	ENSSLDG00000013147	rbm4.1	65	56.209
ENSSLDG00000017182	rbm4.3	96	68.843	ENSSLDG00000017204	rbm4.3	97	71.513

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000017182	rbm4.3	96	66.077	ENSAPOG00000002953	rbm4.3	97	70.796	Acanthochromis_polyacanthus
ENSSLDG00000017182	rbm4.3	100	83.721	ENSAPOG00000002991	rbm4.3	100	84.884	Acanthochromis_polyacanthus
ENSSLDG00000017182	rbm4.3	96	62.130	ENSACIG00000021311	-	97	66.568	Amphilophus_citrinellus
ENSSLDG00000017182	rbm4.3	100	84.104	ENSACIG00000021295	rbm4.3	100	84.104	Amphilophus_citrinellus
ENSSLDG00000017182	rbm4.3	100	83.188	ENSAOCG00000007992	rbm4.3	100	84.638	Amphiprion_ocellaris
ENSSLDG00000017182	rbm4.3	96	68.249	ENSAOCG00000008015	rbm4.3	97	70.920	Amphiprion_ocellaris
ENSSLDG00000017182	rbm4.3	96	68.249	ENSAPEG00000017324	rbm4.3	97	70.920	Amphiprion_percula
ENSSLDG00000017182	rbm4.3	100	83.478	ENSAPEG00000017288	rbm4.3	100	84.928	Amphiprion_percula
ENSSLDG00000017182	rbm4.3	96	68.249	ENSATEG00000019375	rbm4.3	97	70.920	Anabas_testudineus
ENSSLDG00000017182	rbm4.3	100	84.211	ENSATEG00000019395	rbm4.3	100	84.503	Anabas_testudineus
ENSSLDG00000017182	rbm4.3	100	81.322	ENSACLG00000010642	rbm4.3	100	81.322	Astatotilapia_calliptera
ENSSLDG00000017182	rbm4.3	96	62.426	ENSACLG00000010620	-	97	66.864	Astatotilapia_calliptera
ENSSLDG00000017182	rbm4.3	53	74.444	ENSAMXG00000040224	rbm4.3	73	72.778	Astyanax_mexicanus
ENSSLDG00000017182	rbm4.3	99	62.784	ENSCSEG00000013659	rbm4.3	97	65.000	Cynoglossus_semilaevis
ENSSLDG00000017182	rbm4.3	96	63.235	ENSCVAG00000008508	rbm4.3	97	66.959	Cyprinodon_variegatus
ENSSLDG00000017182	rbm4.3	100	75.793	ENSCVAG00000008502	rbm4.3	100	77.233	Cyprinodon_variegatus
ENSSLDG00000017182	rbm4.3	95	67.665	ENSDARG00000022129	rbm4.3	99	68.768	Danio_rerio
ENSSLDG00000017182	rbm4.3	99	65.812	ENSELUG00000022150	rbm4.3	99	66.382	Esox_lucius
ENSSLDG00000017182	rbm4.3	98	66.954	ENSELUG00000022155	rbm4.3	97	68.622	Esox_lucius
ENSSLDG00000017182	rbm4.3	98	67.055	ENSELUG00000022168	rbm4.3	97	70.118	Esox_lucius
ENSSLDG00000017182	rbm4.3	79	70.397	ENSFHEG00000023137	rbm4.3	87	70.397	Fundulus_heteroclitus
ENSSLDG00000017182	rbm4.3	100	70.904	ENSFHEG00000023096	rbm4.3	100	73.729	Fundulus_heteroclitus
ENSSLDG00000017182	rbm4.3	63	75.688	ENSGMOG00000004032	rbm4.3	53	75.688	Gadus_morhua
ENSSLDG00000017182	rbm4.3	96	73.494	ENSGAFG00000001935	rbm4.3	97	72.590	Gambusia_affinis
ENSSLDG00000017182	rbm4.3	100	76.724	ENSGACG00000019980	rbm4.3	100	76.724	Gasterosteus_aculeatus
ENSSLDG00000017182	rbm4.3	96	62.426	ENSHBUG00000009020	-	97	66.864	Haplochromis_burtoni
ENSSLDG00000017182	rbm4.3	100	80.747	ENSHBUG00000009051	rbm4.3	100	80.747	Haplochromis_burtoni
ENSSLDG00000017182	rbm4.3	95	60.241	ENSHCOG00000010349	rbm4.3	96	63.798	Hippocampus_comes
ENSSLDG00000017182	rbm4.3	100	66.667	ENSHCOG00000010363	rbm4.3	94	69.643	Hippocampus_comes
ENSSLDG00000017182	rbm4.3	99	64.205	ENSIPUG00000022943	RBM4B	99	63.920	Ictalurus_punctatus
ENSSLDG00000017182	rbm4.3	99	62.139	ENSKMAG00000017468	rbm4.3	99	63.324	Kryptolebias_marmoratus
ENSSLDG00000017182	rbm4.3	100	71.591	ENSKMAG00000014541	rbm4.3	100	72.443	Kryptolebias_marmoratus
ENSSLDG00000017182	rbm4.3	96	65.680	ENSLBEG00000001071	-	97	68.343	Labrus_bergylta
ENSSLDG00000017182	rbm4.3	56	82.105	ENSLBEG00000001025	rbm4.3	86	81.579	Labrus_bergylta
ENSSLDG00000017182	rbm4.3	95	54.670	ENSLOCG00000002755	rbm4.3	99	58.311	Lepisosteus_oculatus
ENSSLDG00000017182	rbm4.3	100	87.097	ENSMAMG00000004701	rbm4.3	100	87.097	Mastacembelus_armatus
ENSSLDG00000017182	rbm4.3	96	68.249	ENSMAMG00000004715	-	81	70.920	Mastacembelus_armatus
ENSSLDG00000017182	rbm4.3	96	59.172	ENSMZEG00005007417	-	97	63.609	Maylandia_zebra
ENSSLDG00000017182	rbm4.3	85	82.253	ENSMZEG00005007441	rbm4.3	79	82.253	Maylandia_zebra
ENSSLDG00000017182	rbm4.3	100	81.322	ENSMZEG00005028540	rbm4.3	100	81.322	Maylandia_zebra
ENSSLDG00000017182	rbm4.3	84	59.797	ENSMZEG00005028537	-	85	64.026	Maylandia_zebra
ENSSLDG00000017182	rbm4.3	100	80.347	ENSMMOG00000012191	rbm4.3	100	81.214	Mola_mola
ENSSLDG00000017182	rbm4.3	92	80.511	ENSMALG00000003032	rbm4.3	95	82.353	Monopterus_albus
ENSSLDG00000017182	rbm4.3	84	68.243	ENSMALG00000003001	rbm4.3	87	71.284	Monopterus_albus
ENSSLDG00000017182	rbm4.3	100	81.818	ENSMALG00000015014	-	100	81.818	Monopterus_albus
ENSSLDG00000017182	rbm4.3	100	81.268	ENSNBRG00000012372	rbm4.3	100	81.268	Neolamprologus_brichardi
ENSSLDG00000017182	rbm4.3	100	80.912	ENSONIG00000018378	rbm4.3	100	80.912	Oreochromis_niloticus
ENSSLDG00000017182	rbm4.3	96	62.426	ENSONIG00000018380	-	97	66.864	Oreochromis_niloticus
ENSSLDG00000017182	rbm4.3	96	59.012	ENSORLG00000011589	rbm4.3	96	60.000	Oryzias_latipes
ENSSLDG00000017182	rbm4.3	96	59.420	ENSORLG00000012473	rbm4.3	96	59.130	Oryzias_latipes
ENSSLDG00000017182	rbm4.3	96	68.485	ENSORLG00000024749	rbm4.3	100	68.208	Oryzias_latipes
ENSSLDG00000017182	rbm4.3	96	59.420	ENSORLG00020012464	rbm4.3	96	59.130	Oryzias_latipes_hni
ENSSLDG00000017182	rbm4.3	100	68.605	ENSORLG00020012482	rbm4.3	100	68.605	Oryzias_latipes_hni
ENSSLDG00000017182	rbm4.3	96	58.721	ENSORLG00020012474	rbm4.3	96	59.710	Oryzias_latipes_hni
ENSSLDG00000017182	rbm4.3	100	68.895	ENSORLG00015013721	rbm4.3	100	68.895	Oryzias_latipes_hsok
ENSSLDG00000017182	rbm4.3	96	57.849	ENSORLG00015013698	rbm4.3	96	60.000	Oryzias_latipes_hsok
ENSSLDG00000017182	rbm4.3	96	59.420	ENSORLG00015013686	rbm4.3	96	59.130	Oryzias_latipes_hsok
ENSSLDG00000017182	rbm4.3	100	71.014	ENSOMEG00000005950	rbm4.3	100	71.304	Oryzias_melastigma
ENSSLDG00000017182	rbm4.3	96	56.522	ENSOMEG00000005929	rbm4.3	96	59.538	Oryzias_melastigma
ENSSLDG00000017182	rbm4.3	99	58.146	ENSOMEG00000005918	rbm4.3	94	62.538	Oryzias_melastigma
ENSSLDG00000017182	rbm4.3	93	68.182	ENSPKIG00000007001	rbm4.3	97	67.656	Paramormyrops_kingsleyae
ENSSLDG00000017182	rbm4.3	100	74.359	ENSPLAG00000006077	rbm4.3	100	74.074	Poecilia_latipinna
ENSSLDG00000017182	rbm4.3	99	63.068	ENSPLAG00000006131	rbm4.3	97	64.035	Poecilia_latipinna
ENSSLDG00000017182	rbm4.3	99	63.068	ENSPMEG00000024271	rbm4.3	97	64.327	Poecilia_mexicana
ENSSLDG00000017182	rbm4.3	96	63.930	ENSPMEG00000024263	rbm4.3	97	64.912	Poecilia_mexicana
ENSSLDG00000017182	rbm4.3	100	75.143	ENSPMEG00000024260	rbm4.3	100	74.857	Poecilia_mexicana
ENSSLDG00000017182	rbm4.3	99	61.782	ENSPREG00000002156	rbm4.3	97	61.538	Poecilia_reticulata
ENSSLDG00000017182	rbm4.3	100	74.000	ENSPREG00000002093	-	100	74.571	Poecilia_reticulata
ENSSLDG00000017182	rbm4.3	100	81.089	ENSPNYG00000018564	rbm4.3	100	81.089	Pundamilia_nyererei
ENSSLDG00000017182	rbm4.3	96	62.426	ENSPNYG00000018541	rbm4.3	97	66.864	Pundamilia_nyererei
ENSSLDG00000017182	rbm4.3	98	66.197	ENSPNAG00000013053	rbm4.3	97	66.000	Pygocentrus_nattereri
ENSSLDG00000017182	rbm4.3	98	59.777	ENSSFOG00015015563	rbm4.3	97	60.057	Scleropages_formosus
ENSSLDG00000017182	rbm4.3	100	81.686	ENSSMAG00000013653	rbm4.3	100	82.558	Scophthalmus_maximus
ENSSLDG00000017182	rbm4.3	96	68.047	ENSSMAG00000013644	rbm4.3	97	68.546	Scophthalmus_maximus
ENSSLDG00000017182	rbm4.3	96	68.843	ENSSDUG00000018435	rbm4.3	97	71.513	Seriola_dumerili
ENSSLDG00000017182	rbm4.3	100	98.824	ENSSDUG00000018422	rbm4.3	100	98.824	Seriola_dumerili
ENSSLDG00000017182	rbm4.3	100	84.257	ENSSPAG00000008041	rbm4.3	85	84.840	Stegastes_partitus
ENSSLDG00000017182	rbm4.3	99	68.103	ENSSPAG00000008062	rbm4.3	97	70.623	Stegastes_partitus
ENSSLDG00000017182	rbm4.3	100	78.488	ENSTRUG00000023874	rbm4.3	100	79.360	Takifugu_rubripes
ENSSLDG00000017182	rbm4.3	98	66.859	ENSTRUG00000020901	rbm4.3	97	65.680	Takifugu_rubripes
ENSSLDG00000017182	rbm4.3	98	64.431	ENSTNIG00000005668	rbm4.3	97	63.690	Tetraodon_nigroviridis
ENSSLDG00000017182	rbm4.3	96	74.702	ENSXCOG00000005996	rbm4.3	97	74.702	Xiphophorus_couchianus
ENSSLDG00000017182	rbm4.3	96	63.050	ENSXCOG00000006001	rbm4.3	97	64.035	Xiphophorus_couchianus
ENSSLDG00000017182	rbm4.3	96	63.050	ENSXMAG00000021997	rbm4.3	97	64.035	Xiphophorus_maculatus
ENSSLDG00000017182	rbm4.3	99	63.636	ENSXMAG00000011698	rbm4.3	97	64.620	Xiphophorus_maculatus
ENSSLDG00000017182	rbm4.3	96	74.260	ENSXMAG00000025173	rbm4.3	100	74.857	Xiphophorus_maculatus