EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000017204 (Gene tree)
Gene ID: -
Gene Symbol: rbm4.3 (1 of many)
Alias: fb55c03|fb78a04|fj36h04|wu:fb55c03|wu:fb78a04|wu:fj36h04|zgc:56141|zgc:77000
Full Name: RNA-binding protein 4B-like
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 4503 bases
Position: chrPEQF01099455.1:220894-225396
Accession: 111647031
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000022035	RRM_5	PF13893.6	4.1e-12	1	2
ENSSLDP00000022035	RRM_5	PF13893.6	4.1e-12	2	2
ENSSLDP00000022041	RRM_5	PF13893.6	4.1e-12	1	2
ENSSLDP00000022041	RRM_5	PF13893.6	4.1e-12	2	2
ENSSLDP00000022035	RRM_1	PF00076.22	5.9e-29	1	2
ENSSLDP00000022035	RRM_1	PF00076.22	5.9e-29	2	2
ENSSLDP00000022041	RRM_1	PF00076.22	5.9e-29	1	2
ENSSLDP00000022041	RRM_1	PF00076.22	5.9e-29	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000022755	-	3893	XM_023396638	ENSSLDP00000022035	346 (aa)	XP_023252406	UPI000BBEDE2F
ENSSLDT00000022762	-	2959	XM_023396637	ENSSLDP00000022041	346 (aa)	XP_023252405	UPI000BBEDE2F

Gene Model

Click here to download ENSSLDG00000017204's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000017204's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000017204	rbm4.3	86	56.667	ENSSLDG00000013147	rbm4.1	65	56.667
ENSSLDG00000017204	rbm4.3	97	71.513	ENSSLDG00000017182	rbm4.3	96	68.843

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000017204	rbm4.3	97	71.006	ENSAPOG00000002991	rbm4.3	96	69.139	Acanthochromis_polyacanthus
ENSSLDG00000017204	rbm4.3	100	92.529	ENSAPOG00000002953	rbm4.3	100	92.816	Acanthochromis_polyacanthus
ENSSLDG00000017204	rbm4.3	100	88.761	ENSACIG00000021311	-	100	89.049	Amphilophus_citrinellus
ENSSLDG00000017204	rbm4.3	97	71.131	ENSACIG00000021295	rbm4.3	96	69.643	Amphilophus_citrinellus
ENSSLDG00000017204	rbm4.3	97	70.623	ENSAOCG00000007992	rbm4.3	96	68.843	Amphiprion_ocellaris
ENSSLDG00000017204	rbm4.3	100	94.509	ENSAOCG00000008015	rbm4.3	100	94.509	Amphiprion_ocellaris
ENSSLDG00000017204	rbm4.3	100	93.931	ENSAPEG00000017324	rbm4.3	100	92.197	Amphiprion_percula
ENSSLDG00000017204	rbm4.3	97	70.920	ENSAPEG00000017288	rbm4.3	96	69.139	Amphiprion_percula
ENSSLDG00000017204	rbm4.3	97	71.598	ENSATEG00000019395	rbm4.3	96	71.598	Anabas_testudineus
ENSSLDG00000017204	rbm4.3	100	97.688	ENSATEG00000019375	rbm4.3	100	97.688	Anabas_testudineus
ENSSLDG00000017204	rbm4.3	100	87.896	ENSACLG00000010620	-	100	88.184	Astatotilapia_calliptera
ENSSLDG00000017204	rbm4.3	99	69.714	ENSACLG00000010642	rbm4.3	99	69.429	Astatotilapia_calliptera
ENSSLDG00000017204	rbm4.3	61	76.777	ENSAMXG00000040224	rbm4.3	82	74.020	Astyanax_mexicanus
ENSSLDG00000017204	rbm4.3	100	85.960	ENSCSEG00000013659	rbm4.3	100	84.814	Cynoglossus_semilaevis
ENSSLDG00000017204	rbm4.3	100	74.644	ENSCVAG00000008508	rbm4.3	100	78.348	Cyprinodon_variegatus
ENSSLDG00000017204	rbm4.3	99	66.092	ENSCVAG00000008502	rbm4.3	99	66.667	Cyprinodon_variegatus
ENSSLDG00000017204	rbm4.3	95	73.591	ENSDARG00000022129	rbm4.3	97	72.647	Danio_rerio
ENSSLDG00000017204	rbm4.3	99	76.218	ENSELUG00000022150	rbm4.3	97	76.176	Esox_lucius
ENSSLDG00000017204	rbm4.3	99	78.448	ENSELUG00000022155	rbm4.3	99	78.448	Esox_lucius
ENSSLDG00000017204	rbm4.3	100	70.822	ENSELUG00000022168	rbm4.3	100	71.023	Esox_lucius
ENSSLDG00000017204	rbm4.3	81	81.362	ENSFHEG00000023137	rbm4.3	84	82.222	Fundulus_heteroclitus
ENSSLDG00000017204	rbm4.3	100	62.393	ENSGAFG00000001935	rbm4.3	100	62.571	Gambusia_affinis
ENSSLDG00000017204	rbm4.3	94	89.655	ENSGACG00000019980	rbm4.3	77	89.655	Gasterosteus_aculeatus
ENSSLDG00000017204	rbm4.3	99	70.000	ENSHBUG00000009051	rbm4.3	99	69.714	Haplochromis_burtoni
ENSSLDG00000017204	rbm4.3	100	87.896	ENSHBUG00000009020	-	100	88.184	Haplochromis_burtoni
ENSSLDG00000017204	rbm4.3	95	73.874	ENSHCOG00000010349	rbm4.3	100	73.864	Hippocampus_comes
ENSSLDG00000017204	rbm4.3	100	69.231	ENSIPUG00000022943	RBM4B	100	69.516	Ictalurus_punctatus
ENSSLDG00000017204	rbm4.3	97	63.095	ENSKMAG00000014541	rbm4.3	95	63.314	Kryptolebias_marmoratus
ENSSLDG00000017204	rbm4.3	100	75.143	ENSKMAG00000017468	rbm4.3	100	72.000	Kryptolebias_marmoratus
ENSSLDG00000017204	rbm4.3	55	75.393	ENSLBEG00000001025	rbm4.3	85	74.737	Labrus_bergylta
ENSSLDG00000017204	rbm4.3	100	92.507	ENSLBEG00000001071	-	100	93.948	Labrus_bergylta
ENSSLDG00000017204	rbm4.3	95	63.435	ENSLOCG00000002755	rbm4.3	100	63.228	Lepisosteus_oculatus
ENSSLDG00000017204	rbm4.3	100	98.266	ENSMAMG00000004715	-	84	98.266	Mastacembelus_armatus
ENSSLDG00000017204	rbm4.3	97	70.536	ENSMAMG00000004701	rbm4.3	96	70.833	Mastacembelus_armatus
ENSSLDG00000017204	rbm4.3	85	81.356	ENSMZEG00005028537	-	85	80.795	Maylandia_zebra
ENSSLDG00000017204	rbm4.3	86	71.044	ENSMZEG00005007441	rbm4.3	79	69.024	Maylandia_zebra
ENSSLDG00000017204	rbm4.3	100	83.862	ENSMZEG00005007417	-	100	84.150	Maylandia_zebra
ENSSLDG00000017204	rbm4.3	99	69.714	ENSMZEG00005028540	rbm4.3	99	69.429	Maylandia_zebra
ENSSLDG00000017204	rbm4.3	97	66.962	ENSMMOG00000012191	rbm4.3	96	65.680	Mola_mola
ENSSLDG00000017204	rbm4.3	97	68.955	ENSMALG00000015014	-	96	66.866	Monopterus_albus
ENSSLDG00000017204	rbm4.3	91	69.524	ENSMALG00000003032	rbm4.3	95	67.619	Monopterus_albus
ENSSLDG00000017204	rbm4.3	88	95.098	ENSMALG00000003001	rbm4.3	87	97.627	Monopterus_albus
ENSSLDG00000017204	rbm4.3	97	69.733	ENSNBRG00000012372	rbm4.3	96	67.953	Neolamprologus_brichardi
ENSSLDG00000017204	rbm4.3	97	69.706	ENSONIG00000018378	rbm4.3	96	68.235	Oreochromis_niloticus
ENSSLDG00000017204	rbm4.3	100	87.896	ENSONIG00000018380	-	100	88.184	Oreochromis_niloticus
ENSSLDG00000017204	rbm4.3	100	73.816	ENSORLG00000012473	rbm4.3	100	71.866	Oryzias_latipes
ENSSLDG00000017204	rbm4.3	97	60.896	ENSORLG00000024749	rbm4.3	96	55.882	Oryzias_latipes
ENSSLDG00000017204	rbm4.3	100	76.880	ENSORLG00000011589	rbm4.3	100	74.373	Oryzias_latipes
ENSSLDG00000017204	rbm4.3	100	73.816	ENSORLG00020012464	rbm4.3	100	71.866	Oryzias_latipes_hni
ENSSLDG00000017204	rbm4.3	99	61.671	ENSORLG00020012482	rbm4.3	99	57.307	Oryzias_latipes_hni
ENSSLDG00000017204	rbm4.3	100	76.602	ENSORLG00020012474	rbm4.3	100	74.373	Oryzias_latipes_hni
ENSSLDG00000017204	rbm4.3	97	61.424	ENSORLG00015013721	rbm4.3	96	56.765	Oryzias_latipes_hsok
ENSSLDG00000017204	rbm4.3	100	73.816	ENSORLG00015013686	rbm4.3	100	71.866	Oryzias_latipes_hsok
ENSSLDG00000017204	rbm4.3	100	75.487	ENSORLG00015013698	rbm4.3	100	74.652	Oryzias_latipes_hsok
ENSSLDG00000017204	rbm4.3	97	74.138	ENSOMEG00000005929	rbm4.3	100	72.500	Oryzias_melastigma
ENSSLDG00000017204	rbm4.3	100	72.067	ENSOMEG00000005918	rbm4.3	100	70.670	Oryzias_melastigma
ENSSLDG00000017204	rbm4.3	97	61.424	ENSOMEG00000005950	rbm4.3	96	62.908	Oryzias_melastigma
ENSSLDG00000017204	rbm4.3	94	71.601	ENSPKIG00000007001	rbm4.3	100	70.487	Paramormyrops_kingsleyae
ENSSLDG00000017204	rbm4.3	100	76.923	ENSPLAG00000006131	rbm4.3	100	77.778	Poecilia_latipinna
ENSSLDG00000017204	rbm4.3	99	64.957	ENSPLAG00000006077	rbm4.3	99	63.714	Poecilia_latipinna
ENSSLDG00000017204	rbm4.3	100	76.638	ENSPMEG00000024271	rbm4.3	100	77.493	Poecilia_mexicana
ENSSLDG00000017204	rbm4.3	99	65.429	ENSPMEG00000024260	rbm4.3	99	64.470	Poecilia_mexicana
ENSSLDG00000017204	rbm4.3	100	75.499	ENSPMEG00000024263	rbm4.3	100	78.632	Poecilia_mexicana
ENSSLDG00000017204	rbm4.3	100	73.199	ENSPREG00000002156	rbm4.3	100	74.640	Poecilia_reticulata
ENSSLDG00000017204	rbm4.3	99	65.254	ENSPREG00000002093	-	99	65.043	Poecilia_reticulata
ENSSLDG00000017204	rbm4.3	99	69.429	ENSPNYG00000018564	rbm4.3	99	69.429	Pundamilia_nyererei
ENSSLDG00000017204	rbm4.3	100	87.896	ENSPNYG00000018541	rbm4.3	100	88.184	Pundamilia_nyererei
ENSSLDG00000017204	rbm4.3	100	71.745	ENSPNAG00000013053	rbm4.3	100	71.229	Pygocentrus_nattereri
ENSSLDG00000017204	rbm4.3	100	68.421	ENSSFOG00015015563	rbm4.3	100	68.421	Scleropages_formosus
ENSSLDG00000017204	rbm4.3	100	92.486	ENSSMAG00000013644	rbm4.3	100	92.486	Scophthalmus_maximus
ENSSLDG00000017204	rbm4.3	97	67.463	ENSSMAG00000013653	rbm4.3	96	68.657	Scophthalmus_maximus
ENSSLDG00000017204	rbm4.3	97	71.893	ENSSDUG00000018422	rbm4.3	96	69.231	Seriola_dumerili
ENSSLDG00000017204	rbm4.3	100	100.000	ENSSDUG00000018435	rbm4.3	100	100.000	Seriola_dumerili
ENSSLDG00000017204	rbm4.3	97	69.048	ENSSPAG00000008041	rbm4.3	81	67.463	Stegastes_partitus
ENSSLDG00000017204	rbm4.3	100	92.197	ENSSPAG00000008062	rbm4.3	100	92.197	Stegastes_partitus
ENSSLDG00000017204	rbm4.3	97	64.497	ENSTRUG00000023874	rbm4.3	96	66.372	Takifugu_rubripes
ENSSLDG00000017204	rbm4.3	100	86.207	ENSTRUG00000020901	rbm4.3	100	85.057	Takifugu_rubripes
ENSSLDG00000017204	rbm4.3	100	84.971	ENSTNIG00000005668	rbm4.3	100	84.971	Tetraodon_nigroviridis
ENSSLDG00000017204	rbm4.3	100	76.638	ENSXCOG00000006001	rbm4.3	100	77.493	Xiphophorus_couchianus
ENSSLDG00000017204	rbm4.3	97	64.897	ENSXCOG00000005996	rbm4.3	97	65.385	Xiphophorus_couchianus
ENSSLDG00000017204	rbm4.3	100	76.638	ENSXMAG00000021997	rbm4.3	100	77.493	Xiphophorus_maculatus
ENSSLDG00000017204	rbm4.3	97	65.205	ENSXMAG00000025173	rbm4.3	99	64.943	Xiphophorus_maculatus
ENSSLDG00000017204	rbm4.3	100	76.923	ENSXMAG00000011698	rbm4.3	100	77.778	Xiphophorus_maculatus