EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000017225 (Gene tree)
Gene ID: -
Gene Symbol: ddx43
Alias: zgc:174910
Full Name: probable ATP-dependent RNA helicase DDX43
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 9238 bases
Position: chrPEQF01099035.1:610528-619765
Accession: 111662014
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000022087	KH_1	PF00013.29	1.4e-14	1	1
ENSSLDP00000022087	KH_2	PF07650.17	2.5e-05	1	1
ENSSLDP00000022087	DEAD	PF00270.29	2.2e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000022808	-	2121	XM_023415748	ENSSLDP00000022087	706 (aa)	XP_023271516	-

Gene Model

Click here to download ENSSLDG00000017225's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000017225's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000017225	ddx43	53	30.971	ENSSLDG00000006386	-	89	30.971
ENSSLDG00000017225	ddx43	50	32.676	ENSSLDG00000000132	ddx61	71	32.676
ENSSLDG00000017225	ddx43	55	46.565	ENSSLDG00000003614	DDX5	61	46.565
ENSSLDG00000017225	ddx43	51	37.838	ENSSLDG00000015312	ddx4	88	38.968
ENSSLDG00000017225	ddx43	50	33.427	ENSSLDG00000011941	eif4a1b	86	33.427
ENSSLDG00000017225	ddx43	57	40.941	ENSSLDG00000002762	-	61	40.045
ENSSLDG00000017225	ddx43	53	35.000	ENSSLDG00000024883	kif14	59	35.000
ENSSLDG00000017225	ddx43	56	44.608	ENSSLDG00000024923	-	75	43.620
ENSSLDG00000017225	ddx43	50	31.868	ENSSLDG00000017107	zgc:193690	72	31.868
ENSSLDG00000017225	ddx43	57	32.619	ENSSLDG00000016999	ddx52	71	32.619
ENSSLDG00000017225	ddx43	55	45.269	ENSSLDG00000008526	-	71	46.012
ENSSLDG00000017225	ddx43	50	32.486	ENSSLDG00000007608	-	70	32.486
ENSSLDG00000017225	ddx43	53	36.126	ENSSLDG00000018142	ddx47	82	33.971
ENSSLDG00000017225	ddx43	55	40.806	ENSSLDG00000010264	DDX41	61	40.806
ENSSLDG00000017225	ddx43	52	32.880	ENSSLDG00000015202	eif4a2	88	32.880
ENSSLDG00000017225	ddx43	55	47.074	ENSSLDG00000024131	ddx5	63	47.074
ENSSLDG00000017225	ddx43	50	33.051	ENSSLDG00000006167	ddx6	72	33.051
ENSSLDG00000017225	ddx43	58	40.046	ENSSLDG00000010453	ddx23	53	40.046
ENSSLDG00000017225	ddx43	55	41.404	ENSSLDG00000018297	-	65	40.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000017225	ddx43	94	74.085	ENSAPOG00000001712	ddx43	94	74.085	Acanthochromis_polyacanthus
ENSSLDG00000017225	ddx43	93	67.916	ENSACIG00000012170	ddx43	96	67.964	Amphilophus_citrinellus
ENSSLDG00000017225	ddx43	93	79.468	ENSAOCG00000001331	ddx43	93	79.381	Amphiprion_ocellaris
ENSSLDG00000017225	ddx43	93	80.208	ENSAPEG00000001133	ddx43	92	80.238	Amphiprion_percula
ENSSLDG00000017225	ddx43	93	81.682	ENSATEG00000012664	ddx43	96	81.682	Anabas_testudineus
ENSSLDG00000017225	ddx43	77	65.771	ENSAPLG00000010182	-	96	70.726	Anas_platyrhynchos
ENSSLDG00000017225	ddx43	80	64.716	ENSACAG00000004387	-	98	58.321	Anolis_carolinensis
ENSSLDG00000017225	ddx43	93	76.775	ENSACLG00000026081	ddx43	97	76.809	Astatotilapia_calliptera
ENSSLDG00000017225	ddx43	93	68.041	ENSAMXG00000004457	ddx43	93	67.737	Astyanax_mexicanus
ENSSLDG00000017225	ddx43	55	53.015	WBGene00013214	Y54G11A.3	79	53.015	Caenorhabditis_elegans
ENSSLDG00000017225	ddx43	57	60.988	ENSCSEG00000000532	ddx43	98	61.481	Cynoglossus_semilaevis
ENSSLDG00000017225	ddx43	86	66.395	ENSCVAG00000009980	ddx43	93	66.395	Cyprinodon_variegatus
ENSSLDG00000017225	ddx43	94	68.713	ENSDARG00000022614	ddx43	94	68.860	Danio_rerio
ENSSLDG00000017225	ddx43	87	46.718	FBgn0037549	CG7878	91	46.667	Drosophila_melanogaster
ENSSLDG00000017225	ddx43	71	45.205	ENSETEG00000014626	-	97	44.359	Echinops_telfairi
ENSSLDG00000017225	ddx43	93	69.670	ENSELUG00000012126	ddx43	96	69.670	Esox_lucius
ENSSLDG00000017225	ddx43	83	63.366	ENSFALG00000007042	-	98	59.193	Ficedula_albicollis
ENSSLDG00000017225	ddx43	71	78.476	ENSFHEG00000011226	ddx43	95	78.517	Fundulus_heteroclitus
ENSSLDG00000017225	ddx43	63	79.646	ENSGMOG00000004178	ddx43	97	79.775	Gadus_morhua
ENSSLDG00000017225	ddx43	60	72.834	ENSGALG00000015928	-	97	72.834	Gallus_gallus
ENSSLDG00000017225	ddx43	93	70.949	ENSGAFG00000012622	ddx43	97	70.845	Gambusia_affinis
ENSSLDG00000017225	ddx43	79	83.039	ENSGACG00000012072	ddx43	94	93.165	Gasterosteus_aculeatus
ENSSLDG00000017225	ddx43	94	55.344	ENSGAGG00000025230	-	99	55.473	Gopherus_agassizii
ENSSLDG00000017225	ddx43	93	75.556	ENSHBUG00000011653	ddx43	97	76.662	Haplochromis_burtoni
ENSSLDG00000017225	ddx43	93	69.196	ENSHCOG00000014704	ddx43	96	69.345	Hippocampus_comes
ENSSLDG00000017225	ddx43	95	67.977	ENSIPUG00000023423	ddx43	96	68.358	Ictalurus_punctatus
ENSSLDG00000017225	ddx43	93	74.307	ENSKMAG00000016167	ddx43	96	74.198	Kryptolebias_marmoratus
ENSSLDG00000017225	ddx43	93	77.347	ENSLBEG00000007913	ddx43	96	77.448	Labrus_bergylta
ENSSLDG00000017225	ddx43	67	65.779	ENSLACG00000000741	ddx43	100	65.574	Latimeria_chalumnae
ENSSLDG00000017225	ddx43	93	64.286	ENSLOCG00000016170	ddx43	96	64.179	Lepisosteus_oculatus
ENSSLDG00000017225	ddx43	94	72.820	ENSMAMG00000022128	ddx43	98	72.820	Mastacembelus_armatus
ENSSLDG00000017225	ddx43	93	76.775	ENSMZEG00005027349	ddx43	97	76.809	Maylandia_zebra
ENSSLDG00000017225	ddx43	79	64.841	ENSMGAG00000013832	-	98	63.860	Meleagris_gallopavo
ENSSLDG00000017225	ddx43	93	76.621	ENSMMOG00000007346	ddx43	95	76.312	Mola_mola
ENSSLDG00000017225	ddx43	82	59.966	ENSMODG00000018546	-	92	59.333	Monodelphis_domestica
ENSSLDG00000017225	ddx43	79	52.734	ENSMODG00000014335	-	95	52.557	Monodelphis_domestica
ENSSLDG00000017225	ddx43	94	76.618	ENSMALG00000020673	ddx43	96	76.618	Monopterus_albus
ENSSLDG00000017225	ddx43	93	77.811	ENSNBRG00000010942	ddx43	97	77.844	Neolamprologus_brichardi
ENSSLDG00000017225	ddx43	93	76.662	ENSONIG00000001195	ddx43	99	76.042	Oreochromis_niloticus
ENSSLDG00000017225	ddx43	52	64.042	ENSOANG00000006467	-	100	61.772	Ornithorhynchus_anatinus
ENSSLDG00000017225	ddx43	82	78.921	ENSORLG00000002267	ddx43	91	78.956	Oryzias_latipes
ENSSLDG00000017225	ddx43	82	78.921	ENSORLG00020018592	ddx43	92	78.956	Oryzias_latipes_hni
ENSSLDG00000017225	ddx43	82	78.788	ENSORLG00015004854	ddx43	91	78.788	Oryzias_latipes_hsok
ENSSLDG00000017225	ddx43	84	76.346	ENSOMEG00000023418	ddx43	94	76.509	Oryzias_melastigma
ENSSLDG00000017225	ddx43	93	63.690	ENSPKIG00000002941	ddx43	95	63.490	Paramormyrops_kingsleyae
ENSSLDG00000017225	ddx43	78	65.241	ENSPSIG00000002202	-	97	62.131	Pelodiscus_sinensis
ENSSLDG00000017225	ddx43	53	61.619	ENSPMGG00000019854	ddx43	91	62.211	Periophthalmus_magnuspinnatus
ENSSLDG00000017225	ddx43	79	52.297	ENSPCIG00000002492	-	91	51.767	Phascolarctos_cinereus
ENSSLDG00000017225	ddx43	59	72.115	ENSPCIG00000017981	-	94	72.115	Phascolarctos_cinereus
ENSSLDG00000017225	ddx43	93	71.449	ENSPFOG00000004241	ddx43	97	72.263	Poecilia_formosa
ENSSLDG00000017225	ddx43	93	71.596	ENSPLAG00000023362	ddx43	97	72.409	Poecilia_latipinna
ENSSLDG00000017225	ddx43	93	72.222	ENSPMEG00000004870	ddx43	97	72.263	Poecilia_mexicana
ENSSLDG00000017225	ddx43	93	65.379	ENSPREG00000000923	ddx43	96	66.074	Poecilia_reticulata
ENSSLDG00000017225	ddx43	93	70.667	ENSPNYG00000009064	ddx43	97	70.710	Pundamilia_nyererei
ENSSLDG00000017225	ddx43	93	68.499	ENSPNAG00000001232	ddx43	93	68.202	Pygocentrus_nattereri
ENSSLDG00000017225	ddx43	79	56.560	ENSSHAG00000016933	-	97	56.283	Sarcophilus_harrisii
ENSSLDG00000017225	ddx43	79	60.993	ENSSHAG00000001847	-	93	59.038	Sarcophilus_harrisii
ENSSLDG00000017225	ddx43	80	67.596	ENSSFOG00015012193	ddx43	89	67.190	Scleropages_formosus
ENSSLDG00000017225	ddx43	93	78.080	ENSSMAG00000019288	ddx43	95	78.112	Scophthalmus_maximus
ENSSLDG00000017225	ddx43	93	91.888	ENSSDUG00000020120	ddx43	95	92.353	Seriola_dumerili
ENSSLDG00000017225	ddx43	67	59.833	ENSSPUG00000018097	-	94	60.860	Sphenodon_punctatus
ENSSLDG00000017225	ddx43	93	80.149	ENSSPAG00000006858	ddx43	95	80.769	Stegastes_partitus
ENSSLDG00000017225	ddx43	80	63.167	ENSTGUG00000012684	-	97	63.167	Taeniopygia_guttata
ENSSLDG00000017225	ddx43	92	61.111	ENSTRUG00000012795	ddx43	96	61.111	Takifugu_rubripes
ENSSLDG00000017225	ddx43	78	75.666	ENSTNIG00000009822	ddx43	96	75.666	Tetraodon_nigroviridis
ENSSLDG00000017225	ddx43	93	59.910	ENSXETG00000011767	ddx43	98	59.670	Xenopus_tropicalis
ENSSLDG00000017225	ddx43	93	67.612	ENSXCOG00000013810	ddx43	96	67.511	Xiphophorus_couchianus
ENSSLDG00000017225	ddx43	93	70.760	ENSXMAG00000017126	ddx43	97	70.803	Xiphophorus_maculatus