EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSLDG00000017324 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
HMG box-containing protein 1-like
Gene Type
protein_coding
Species
Seriola_lalandi_dorsalis
Status
putative
Strand
Plus strand
Length
7815 bases
Position
chrPEQF01098889.1:259098-266912
Accession
111657683
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSLDP00000022243AXHPF08517.121.7e-3411
ENSSLDP00000022264AXHPF08517.121.7e-3311
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSLDT00000022986-1524-ENSSLDP00000022264507 (aa)--
ENSSLDT00000022965-1410XM_023409963ENSSLDP00000022243469 (aa)XP_023265731-
Gene Model
Click here to download ENSSLDG00000017324's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000017324's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSLDG00000017324-9960.381ENSSLDG00000009669hbp19962.128
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSLDG00000017324-9955.894ENSG00000105856HBP19464.583Homo_sapiens
ENSSLDG00000017324-9959.534ENSAPOG00000015816hbp19961.277Acanthochromis_polyacanthus
ENSSLDG00000017324-9855.306ENSAMEG00000013492HBP19354.508Ailuropoda_melanoleuca
ENSSLDG00000017324-9660.870ENSACIG00000018873hbp19161.966Amphilophus_citrinellus
ENSSLDG00000017324-9878.913ENSACIG00000019093-9278.696Amphilophus_citrinellus
ENSSLDG00000017324-9959.958ENSAOCG00000010889hbp19961.489Amphiprion_ocellaris
ENSSLDG00000017324-9979.583ENSAOCG00000001429-9280.211Amphiprion_ocellaris
ENSSLDG00000017324-9959.746ENSAPEG00000002330hbp19961.277Amphiprion_percula
ENSSLDG00000017324-9978.750ENSAPEG00000022589-9280.000Amphiprion_percula
ENSSLDG00000017324-9959.322ENSATEG00000016411hbp19961.064Anabas_testudineus
ENSSLDG00000017324-9881.277ENSATEG00000003902-9880.208Anabas_testudineus
ENSSLDG00000017324-9952.941ENSAPLG00000007110HBP19452.130Anas_platyrhynchos
ENSSLDG00000017324-9754.527ENSACAG00000015023HBP19353.512Anolis_carolinensis
ENSSLDG00000017324-9955.894ENSANAG00000022302HBP19455.397Aotus_nancymaae
ENSSLDG00000017324-9959.746ENSACLG00000004758hbp19561.017Astatotilapia_calliptera
ENSSLDG00000017324-9976.421ENSACLG00000003606HBP19378.316Astatotilapia_calliptera
ENSSLDG00000017324-9962.712ENSAMXG00000017678hbp19362.500Astyanax_mexicanus
ENSSLDG00000017324-9854.209ENSBTAG00000005524HBP19254.209Bos_taurus
ENSSLDG00000017324-9955.691ENSCJAG00000016260HBP18465.145Callithrix_jacchus
ENSSLDG00000017324-9955.081ENSCAFG00000003939HBP19354.397Canis_familiaris
ENSSLDG00000017324-9955.081ENSCAFG00020023119HBP19354.397Canis_lupus_dingo
ENSSLDG00000017324-9854.004ENSCHIG00000024405HBP19454.004Capra_hircus
ENSSLDG00000017324-9955.193ENSTSYG00000010057HBP19454.675Carlito_syrichta
ENSSLDG00000017324-9855.010ENSCAPG00000017460HBP19354.209Cavia_aperea
ENSSLDG00000017324-9855.624ENSCPOG00000002375HBP19254.825Cavia_porcellus
ENSSLDG00000017324-9955.894ENSCCAG00000026359HBP19455.397Cebus_capucinus
ENSSLDG00000017324-9956.098ENSCATG00000021910HBP19455.601Cercocebus_atys
ENSSLDG00000017324-9955.714ENSCLAG00000005170HBP19455.215Chinchilla_lanigera
ENSSLDG00000017324-9956.098ENSCSAG00000011395HBP19355.601Chlorocebus_sabaeus
ENSSLDG00000017324-6476.596ENSCHOG00000006820HBP15176.596Choloepus_hoffmanni
ENSSLDG00000017324-9953.955ENSCPBG00000000954HBP19252.749Chrysemys_picta_bellii
ENSSLDG00000017324-9955.894ENSCANG00000022804HBP19455.397Colobus_angolensis_palliatus
ENSSLDG00000017324-9954.361ENSCGRG00001014437Hbp19353.862Cricetulus_griseus_chok1gshd
ENSSLDG00000017324-9954.361ENSCGRG00000013859Hbp19353.862Cricetulus_griseus_crigri
ENSSLDG00000017324-9960.381ENSCSEG00000003373hbp19961.915Cynoglossus_semilaevis
ENSSLDG00000017324-9960.549ENSCVAG00000008930hbp19961.392Cyprinodon_variegatus
ENSSLDG00000017324-9976.068ENSCVAG00000008501-9376.496Cyprinodon_variegatus
ENSSLDG00000017324-9964.331ENSDARG00000028517hbp19563.694Danio_rerio
ENSSLDG00000017324-9954.990ENSDNOG00000004405HBP19054.786Dasypus_novemcinctus
ENSSLDG00000017324-6850.599ENSDORG00000010576Hbp18950.150Dipodomys_ordii
ENSSLDG00000017324-9751.452ENSETEG00000018542HBP19350.936Echinops_telfairi
ENSSLDG00000017324-9844.398ENSEBUG00000016475hbp18443.776Eptatretus_burgeri
ENSSLDG00000017324-9955.510ENSEASG00005017469HBP18654.713Equus_asinus_asinus
ENSSLDG00000017324-9955.081ENSECAG00000020969HBP19354.286Equus_caballus
ENSSLDG00000017324-9867.749ENSELUG00000017031-8767.749Esox_lucius
ENSSLDG00000017324-9961.783ENSELUG00000006967hbp19860.722Esox_lucius
ENSSLDG00000017324-9955.510ENSFCAG00000005858HBP18654.713Felis_catus
ENSSLDG00000017324-9953.535ENSFALG00000010259HBP19252.727Ficedula_albicollis
ENSSLDG00000017324-9855.852ENSFDAG00000007897HBP19255.441Fukomys_damarensis
ENSSLDG00000017324-9975.630ENSFHEG00000014389-9275.420Fundulus_heteroclitus
ENSSLDG00000017324-9959.534ENSFHEG00000008222hbp19961.915Fundulus_heteroclitus
ENSSLDG00000017324-9958.599ENSGMOG00000013782hbp19959.574Gadus_morhua
ENSSLDG00000017324-9953.535ENSGALG00000008050HBP19252.525Gallus_gallus
ENSSLDG00000017324-9959.958ENSGAFG00000021976hbp19961.702Gambusia_affinis
ENSSLDG00000017324-9976.809ENSGAFG00000004651-9276.809Gambusia_affinis
ENSSLDG00000017324-9959.244ENSGACG00000010054hbp19960.084Gasterosteus_aculeatus
ENSSLDG00000017324-9974.788ENSGACG00000019192-9575.000Gasterosteus_aculeatus
ENSSLDG00000017324-9954.268ENSGAGG00000023042HBP19253.061Gopherus_agassizii
ENSSLDG00000017324-9955.918ENSGGOG00000007788HBP19455.193Gorilla_gorilla
ENSSLDG00000017324-9959.958ENSHBUG00000004967hbp19561.229Haplochromis_burtoni
ENSSLDG00000017324-9976.842ENSHBUG00000016198-9378.737Haplochromis_burtoni
ENSSLDG00000017324-9954.582ENSHGLG00000019188HBP19355.010Heterocephalus_glaber_female
ENSSLDG00000017324-9954.582ENSHGLG00100001912HBP19355.010Heterocephalus_glaber_male
ENSSLDG00000017324-9940.412ENSHGLG00100014672-9440.164Heterocephalus_glaber_male
ENSSLDG00000017324-9965.612ENSHCOG00000010740-8964.768Hippocampus_comes
ENSSLDG00000017324-9957.906ENSHCOG00000011877hbp19958.849Hippocampus_comes
ENSSLDG00000017324-9962.025ENSIPUG00000023044hbp19362.656Ictalurus_punctatus
ENSSLDG00000017324-9955.714ENSSTOG00000013846HBP19355.215Ictidomys_tridecemlineatus
ENSSLDG00000017324-9955.510ENSJJAG00000015341Hbp19355.010Jaculus_jaculus
ENSSLDG00000017324-9959.072ENSKMAG00000003132hbp19960.638Kryptolebias_marmoratus
ENSSLDG00000017324-9874.138ENSKMAG00000000266-9572.152Kryptolebias_marmoratus
ENSSLDG00000017324-9974.370ENSLBEG00000023959-9476.261Labrus_bergylta
ENSSLDG00000017324-9960.593ENSLBEG00000012078hbp19961.702Labrus_bergylta
ENSSLDG00000017324-9953.768ENSLACG00000009119HBP19154.268Latimeria_chalumnae
ENSSLDG00000017324-9959.350ENSLOCG00000015822hbp19258.932Lepisosteus_oculatus
ENSSLDG00000017324-9953.862ENSLAFG00000005317HBP19453.768Loxodonta_africana
ENSSLDG00000017324-9956.098ENSMFAG00000030375HBP18366.667Macaca_fascicularis
ENSSLDG00000017324-9756.612ENSMMUG00000015409HBP19255.193Macaca_mulatta
ENSSLDG00000017324-9953.878ENSMNEG00000037516HBP19453.571Macaca_nemestrina
ENSSLDG00000017324-9956.098ENSMLEG00000031993HBP19455.601Mandrillus_leucophaeus
ENSSLDG00000017324-9960.638ENSMAMG00000023227hbp19961.620Mastacembelus_armatus
ENSSLDG00000017324-9978.947ENSMAMG00000023588-9179.158Mastacembelus_armatus
ENSSLDG00000017324-9976.421ENSMZEG00005015065HBP19378.316Maylandia_zebra
ENSSLDG00000017324-9760.345ENSMZEG00005005999hbp17961.702Maylandia_zebra
ENSSLDG00000017324-9953.535ENSMGAG00000006880HBP19352.525Meleagris_gallopavo
ENSSLDG00000017324-9955.193ENSMAUG00000011449Hbp19354.694Mesocricetus_auratus
ENSSLDG00000017324-9856.148ENSMICG00000012858HBP19455.647Microcebus_murinus
ENSSLDG00000017324-9955.375ENSMOCG00000019227Hbp19354.878Microtus_ochrogaster
ENSSLDG00000017324-9880.172ENSMMOG00000010239-9879.526Mola_mola
ENSSLDG00000017324-9760.173ENSMMOG00000012207hbp19360.435Mola_mola
ENSSLDG00000017324-9954.858ENSMODG00000016376HBP18455.488Monodelphis_domestica
ENSSLDG00000017324-10072.708ENSMALG00000010834-9673.750Monopterus_albus
ENSSLDG00000017324-9961.229ENSMALG00000009884hbp19962.553Monopterus_albus
ENSSLDG00000017324-9854.878MGP_CAROLIEiJ_G0017683Hbp19254.786Mus_caroli
ENSSLDG00000017324-9854.878ENSMUSG00000002996Hbp19254.786Mus_musculus
ENSSLDG00000017324-9955.601MGP_PahariEiJ_G0029441Hbp19355.102Mus_pahari
ENSSLDG00000017324-9854.878MGP_SPRETEiJ_G0018525Hbp19452.955Mus_spretus
ENSSLDG00000017324-9955.306ENSMPUG00000018249HBP19354.713Mustela_putorius_furo
ENSSLDG00000017324-9955.510ENSMLUG00000012425HBP19355.328Myotis_lucifugus
ENSSLDG00000017324-9954.694ENSNGAG00000023485Hbp19354.601Nannospalax_galili
ENSSLDG00000017324-9959.958ENSNBRG00000001405hbp19561.229Neolamprologus_brichardi
ENSSLDG00000017324-9976.842ENSNBRG00000017820-9378.737Neolamprologus_brichardi
ENSSLDG00000017324-9956.098ENSNLEG00000008761HBP19455.601Nomascus_leucogenys
ENSSLDG00000017324-8851.259ENSMEUG00000011116HBP18451.259Notamacropus_eugenii
ENSSLDG00000017324-6476.596ENSOPRG00000005315HBP16376.596Ochotona_princeps
ENSSLDG00000017324-9956.327ENSODEG00000001327-9355.624Octodon_degus
ENSSLDG00000017324-9846.452ENSODEG00000000482-9445.572Octodon_degus
ENSSLDG00000017324-9941.139ENSODEG00000010517-9340.717Octodon_degus
ENSSLDG00000017324-9960.169ENSONIG00000008523hbp19962.128Oreochromis_niloticus
ENSSLDG00000017324-9975.000ENSONIG00000011868-9676.446Oreochromis_niloticus
ENSSLDG00000017324-9954.527ENSOANG00000003174HBP19454.527Ornithorhynchus_anatinus
ENSSLDG00000017324-9955.102ENSOCUG00000012758HBP19454.825Oryctolagus_cuniculus
ENSSLDG00000017324-9958.898ENSORLG00000004396hbp19960.213Oryzias_latipes
ENSSLDG00000017324-9974.105ENSORLG00000009474-9374.113Oryzias_latipes
ENSSLDG00000017324-9958.898ENSORLG00020000370hbp19960.000Oryzias_latipes_hni
ENSSLDG00000017324-9974.105ENSORLG00020004269-9374.113Oryzias_latipes_hni
ENSSLDG00000017324-9958.686ENSORLG00015006557hbp19960.000Oryzias_latipes_hsok
ENSSLDG00000017324-9959.110ENSOMEG00000012837hbp19960.638Oryzias_melastigma
ENSSLDG00000017324-9974.735ENSOMEG00000013045-9175.368Oryzias_melastigma
ENSSLDG00000017324-9955.714ENSOGAG00000013102HBP19455.215Otolemur_garnettii
ENSSLDG00000017324-9853.799ENSOARG00000005055HBP19253.799Ovis_aries
ENSSLDG00000017324-9956.122ENSPPAG00000042116HBP19455.397Pan_paniscus
ENSSLDG00000017324-9955.510ENSPPRG00000007240HBP19454.713Panthera_pardus
ENSSLDG00000017324-9953.673ENSPTIG00000002734HBP19452.869Panthera_tigris_altaica
ENSSLDG00000017324-9956.122ENSPTRG00000019575HBP19455.397Pan_troglodytes
ENSSLDG00000017324-9956.098ENSPANG00000024385HBP18366.667Papio_anubis
ENSSLDG00000017324-9357.014ENSPKIG00000016269HBP19254.641Paramormyrops_kingsleyae
ENSSLDG00000017324-9662.771ENSPKIG00000016967hbp19261.783Paramormyrops_kingsleyae
ENSSLDG00000017324-9954.970ENSPSIG00000012478HBP18753.564Pelodiscus_sinensis
ENSSLDG00000017324-9960.211ENSPMGG00000005789hbp19561.053Periophthalmus_magnuspinnatus
ENSSLDG00000017324-9966.523ENSPMGG00000008031-9466.307Periophthalmus_magnuspinnatus
ENSSLDG00000017324-9955.397ENSPEMG00000014801Hbp19354.898Peromyscus_maniculatus_bairdii
ENSSLDG00000017324-9650.214ENSPMAG00000002631hbp19349.170Petromyzon_marinus
ENSSLDG00000017324-9954.675ENSPCIG00000004275HBP18454.694Phascolarctos_cinereus
ENSSLDG00000017324-9959.958ENSPFOG00000003951hbp19961.702Poecilia_formosa
ENSSLDG00000017324-9877.730ENSPFOG00000012271-8977.035Poecilia_formosa
ENSSLDG00000017324-9877.516ENSPLAG00000012669-9976.827Poecilia_latipinna
ENSSLDG00000017324-9959.958ENSPLAG00000003142hbp19961.702Poecilia_latipinna
ENSSLDG00000017324-9959.958ENSPMEG00000003800hbp19961.702Poecilia_mexicana
ENSSLDG00000017324-9977.119ENSPMEG00000015095-9277.119Poecilia_mexicana
ENSSLDG00000017324-5980.144ENSPREG00000015242-8380.144Poecilia_reticulata
ENSSLDG00000017324-9959.534ENSPREG00000004000hbp19961.277Poecilia_reticulata
ENSSLDG00000017324-9955.285ENSPPYG00000017898HBP19254.990Pongo_abelii
ENSSLDG00000017324-9754.886ENSPCAG00000014060HBP19454.393Procavia_capensis
ENSSLDG00000017324-8058.586ENSPCOG00000015370HBP19058.228Propithecus_coquereli
ENSSLDG00000017324-9954.472ENSPVAG00000014543HBP19454.286Pteropus_vampyrus
ENSSLDG00000017324-9959.746ENSPNYG00000001079hbp19561.017Pundamilia_nyererei
ENSSLDG00000017324-9977.053ENSPNYG00000015063HBP19378.947Pundamilia_nyererei
ENSSLDG00000017324-9962.368ENSPNAG00000029977hbp19362.578Pygocentrus_nattereri
ENSSLDG00000017324-9856.122ENSRNOG00000008927Hbp19255.328Rattus_norvegicus
ENSSLDG00000017324-9948.770ENSRBIG00000042410HBP19448.156Rhinopithecus_bieti
ENSSLDG00000017324-9955.894ENSRROG00000036622HBP19455.397Rhinopithecus_roxellana
ENSSLDG00000017324-9956.122ENSSBOG00000023603HBP19455.624Saimiri_boliviensis_boliviensis
ENSSLDG00000017324-9954.268ENSSHAG00000010948HBP19354.082Sarcophilus_harrisii
ENSSLDG00000017324-9963.674ENSSFOG00015011155hbp19463.674Scleropages_formosus
ENSSLDG00000017324-9961.017ENSSMAG00000009892hbp19962.340Scophthalmus_maximus
ENSSLDG00000017324-9979.245ENSSMAG00000012631-8879.245Scophthalmus_maximus
ENSSLDG00000017324-9960.593ENSSDUG00000022273hbp19962.128Seriola_dumerili
ENSSLDG00000017324-9993.920ENSSDUG00000015387-8993.920Seriola_dumerili
ENSSLDG00000017324-8853.196ENSSARG00000007731HBP19452.982Sorex_araneus
ENSSLDG00000017324-9953.239ENSSPUG00000019157HBP18853.252Sphenodon_punctatus
ENSSLDG00000017324-9978.947ENSSPAG00000009193-9279.368Stegastes_partitus
ENSSLDG00000017324-9959.958ENSSPAG00000004739hbp19961.064Stegastes_partitus
ENSSLDG00000017324-9955.081ENSSSCG00000035673HBP19454.713Sus_scrofa
ENSSLDG00000017324-9753.388ENSTGUG00000003100HBP19552.286Taeniopygia_guttata
ENSSLDG00000017324-9959.958ENSTRUG00000016990hbp19961.064Takifugu_rubripes
ENSSLDG00000017324-9967.100ENSTRUG00000011881-7967.249Takifugu_rubripes
ENSSLDG00000017324-9960.677ENSTNIG00000016027hbp19961.571Tetraodon_nigroviridis
ENSSLDG00000017324-9765.517ENSTNIG00000002023-9364.329Tetraodon_nigroviridis
ENSSLDG00000017324-9946.598ENSTBEG00000007793HBP19446.281Tupaia_belangeri
ENSSLDG00000017324-9954.878ENSTTRG00000006826HBP19454.286Tursiops_truncatus
ENSSLDG00000017324-9855.102ENSUAMG00000005951HBP19254.620Ursus_americanus
ENSSLDG00000017324-9855.306ENSUMAG00000018257HBP19254.620Ursus_maritimus
ENSSLDG00000017324-8051.508ENSVPAG00000008629HBP19650.505Vicugna_pacos
ENSSLDG00000017324-9955.081ENSVVUG00000022009HBP19354.397Vulpes_vulpes
ENSSLDG00000017324-9954.970ENSXETG00000005922hbp19452.165Xenopus_tropicalis
ENSSLDG00000017324-9760.560ENSXCOG00000020795hbp19161.702Xiphophorus_couchianus
ENSSLDG00000017324-9959.958ENSXMAG00000016455hbp19961.702Xiphophorus_maculatus
ENSSLDG00000017324-9976.483ENSXMAG00000007586-9276.618Xiphophorus_maculatus

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