EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSLDG00000017418 (Gene tree)
Gene ID: -
Gene Symbol: tdrkh
Alias: TDRD2|zgc:113056
Full Name: tudor and KH domain containing
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 14713 bases
Position: chrPEQF01098858.1:68415-83127
Accession: 111657048
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000022311	KH_1	PF00013.29	1.7e-15	1	1
ENSSLDP00000022320	KH_1	PF00013.29	2.3e-15	1	1
ENSSLDP00000022311	TUDOR	PF00567.24	3.3e-26	1	1
ENSSLDP00000022320	TUDOR	PF00567.24	4.1e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000023042	-	2606	XM_023409019	ENSSLDP00000022320	622 (aa)	XP_023264787	UPI000C6FCC3F
ENSSLDT00000023033	-	2653	XM_023409022	ENSSLDP00000022311	562 (aa)	XP_023264790	-

Gene Model

Click here to download ENSSLDG00000017418's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000017418's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000017418	tdrkh	100	82.124	ENSAPOG00000012653	tdrkh	100	82.124	Acanthochromis_polyacanthus
ENSSLDG00000017418	tdrkh	97	76.330	ENSACIG00000010318	tdrkh	98	76.330	Amphilophus_citrinellus
ENSSLDG00000017418	tdrkh	100	82.655	ENSAOCG00000020623	tdrkh	100	82.655	Amphiprion_ocellaris
ENSSLDG00000017418	tdrkh	100	82.655	ENSAPEG00000018388	tdrkh	100	82.655	Amphiprion_percula
ENSSLDG00000017418	tdrkh	100	83.333	ENSATEG00000023809	tdrkh	100	83.363	Anabas_testudineus
ENSSLDG00000017418	tdrkh	100	74.823	ENSACLG00000003017	tdrkh	100	74.823	Astatotilapia_calliptera
ENSSLDG00000017418	tdrkh	99	61.307	ENSAMXG00000011664	tdrkh	99	61.074	Astyanax_mexicanus
ENSSLDG00000017418	tdrkh	100	68.706	ENSCSEG00000002894	tdrkh	99	69.808	Cynoglossus_semilaevis
ENSSLDG00000017418	tdrkh	60	81.863	ENSCVAG00000020347	tdrkh	77	81.863	Cyprinodon_variegatus
ENSSLDG00000017418	tdrkh	99	61.922	ENSDARG00000053474	tdrkh	99	60.956	Danio_rerio
ENSSLDG00000017418	tdrkh	100	67.254	ENSELUG00000024537	tdrkh	100	65.523	Esox_lucius
ENSSLDG00000017418	tdrkh	100	76.950	ENSFHEG00000003544	tdrkh	100	76.950	Fundulus_heteroclitus
ENSSLDG00000017418	tdrkh	100	67.019	ENSGMOG00000009304	tdrkh	100	66.167	Gadus_morhua
ENSSLDG00000017418	tdrkh	100	73.050	ENSGAFG00000010754	tdrkh	100	72.872	Gambusia_affinis
ENSSLDG00000017418	tdrkh	100	73.239	ENSGACG00000015258	tdrkh	100	74.043	Gasterosteus_aculeatus
ENSSLDG00000017418	tdrkh	100	74.645	ENSHBUG00000017609	tdrkh	100	74.645	Haplochromis_burtoni
ENSSLDG00000017418	tdrkh	99	61.416	ENSIPUG00000009673	tdrkh	99	60.885	Ictalurus_punctatus
ENSSLDG00000017418	tdrkh	100	75.709	ENSKMAG00000016638	tdrkh	95	74.956	Kryptolebias_marmoratus
ENSSLDG00000017418	tdrkh	100	78.938	ENSLBEG00000027323	tdrkh	99	78.683	Labrus_bergylta
ENSSLDG00000017418	tdrkh	99	51.394	ENSLOCG00000011381	tdrkh	99	51.045	Lepisosteus_oculatus
ENSSLDG00000017418	tdrkh	100	78.901	ENSMAMG00000020343	tdrkh	100	78.723	Mastacembelus_armatus
ENSSLDG00000017418	tdrkh	100	74.823	ENSMZEG00005006755	tdrkh	100	74.823	Maylandia_zebra
ENSSLDG00000017418	tdrkh	97	74.862	ENSMMOG00000020663	tdrkh	95	75.606	Mola_mola
ENSSLDG00000017418	tdrkh	100	78.014	ENSMALG00000015401	tdrkh	100	78.014	Monopterus_albus
ENSSLDG00000017418	tdrkh	100	71.631	ENSNBRG00000023815	tdrkh	100	71.631	Neolamprologus_brichardi
ENSSLDG00000017418	tdrkh	100	70.035	ENSORLG00000029204	tdrkh	99	69.858	Oryzias_latipes
ENSSLDG00000017418	tdrkh	96	68.762	ENSORLG00020016168	tdrkh	99	68.577	Oryzias_latipes_hni
ENSSLDG00000017418	tdrkh	100	65.780	ENSORLG00015014094	tdrkh	99	65.603	Oryzias_latipes_hsok
ENSSLDG00000017418	tdrkh	100	71.631	ENSOMEG00000015063	tdrkh	92	72.340	Oryzias_melastigma
ENSSLDG00000017418	tdrkh	100	58.584	ENSPKIG00000017597	tdrkh	100	58.053	Paramormyrops_kingsleyae
ENSSLDG00000017418	tdrkh	100	68.706	ENSPMGG00000019362	tdrkh	100	69.069	Periophthalmus_magnuspinnatus
ENSSLDG00000017418	tdrkh	100	73.357	ENSPFOG00000013032	tdrkh	100	72.148	Poecilia_formosa
ENSSLDG00000017418	tdrkh	100	73.535	ENSPLAG00000004193	tdrkh	100	73.357	Poecilia_latipinna
ENSSLDG00000017418	tdrkh	100	73.357	ENSPMEG00000016502	tdrkh	100	73.179	Poecilia_mexicana
ENSSLDG00000017418	tdrkh	100	71.099	ENSPREG00000004213	tdrkh	100	69.682	Poecilia_reticulata
ENSSLDG00000017418	tdrkh	97	74.359	ENSPNYG00000022818	tdrkh	97	74.359	Pundamilia_nyererei
ENSSLDG00000017418	tdrkh	99	61.552	ENSPNAG00000008783	tdrkh	99	61.436	Pygocentrus_nattereri
ENSSLDG00000017418	tdrkh	100	56.360	ENSSFOG00015001048	tdrkh	100	57.067	Scleropages_formosus
ENSSLDG00000017418	tdrkh	100	84.192	ENSSMAG00000001532	tdrkh	100	84.192	Scophthalmus_maximus
ENSSLDG00000017418	tdrkh	100	98.399	ENSSDUG00000013393	tdrkh	100	98.399	Seriola_dumerili
ENSSLDG00000017418	tdrkh	100	83.186	ENSSPAG00000006435	tdrkh	100	83.779	Stegastes_partitus
ENSSLDG00000017418	tdrkh	97	70.932	ENSTRUG00000006644	tdrkh	97	70.932	Takifugu_rubripes
ENSSLDG00000017418	tdrkh	99	70.848	ENSTNIG00000003157	tdrkh	99	70.848	Tetraodon_nigroviridis
ENSSLDG00000017418	tdrkh	81	88.889	ENSXCOG00000016972	tdrkh	98	88.889	Xiphophorus_couchianus
ENSSLDG00000017418	tdrkh	100	70.745	ENSXMAG00000014756	tdrkh	100	70.567	Xiphophorus_maculatus