EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSLDG00000017477 (Gene tree)
Gene ID: -
Gene Symbol: srrt
Alias: CHUNP6881|ars2|zgc:92060
Full Name: serrate%2C RNA effector molecule
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 8408 bases
Position: chrPEQF01098735.1:1883193-1891600
Accession: 111653949
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000022424	ARS2	PF04959.13	9.7e-90	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000023146	-	2508	XM_023404704	ENSSLDP00000022424	835 (aa)	XP_023260472	-

Gene Model

Click here to download ENSSLDG00000017477's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000017477's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000017477	srrt	87	75.541	ENSG00000087087	SRRT	98	83.871	Homo_sapiens
ENSSLDG00000017477	srrt	86	95.849	ENSAPOG00000002304	srrt	87	95.273	Acanthochromis_polyacanthus
ENSSLDG00000017477	srrt	81	76.703	ENSAMEG00000014506	SRRT	81	75.604	Ailuropoda_melanoleuca
ENSSLDG00000017477	srrt	95	88.250	ENSACIG00000015795	srrt	95	88.000	Amphilophus_citrinellus
ENSSLDG00000017477	srrt	81	65.801	ENSAOCG00000009189	-	78	66.237	Amphiprion_ocellaris
ENSSLDG00000017477	srrt	95	88.875	ENSAOCG00000009693	srrt	95	88.000	Amphiprion_ocellaris
ENSSLDG00000017477	srrt	81	65.801	ENSAPEG00000020016	-	78	66.237	Amphiprion_percula
ENSSLDG00000017477	srrt	95	87.875	ENSAPEG00000003646	srrt	95	87.000	Amphiprion_percula
ENSSLDG00000017477	srrt	95	87.860	ENSATEG00000014425	srrt	95	87.860	Anabas_testudineus
ENSSLDG00000017477	srrt	56	64.449	ENSATEG00000003652	-	85	64.968	Anabas_testudineus
ENSSLDG00000017477	srrt	87	76.087	ENSACAG00000001014	SRRT	83	76.149	Anolis_carolinensis
ENSSLDG00000017477	srrt	85	75.269	ENSANAG00000031718	SRRT	84	74.409	Aotus_nancymaae
ENSSLDG00000017477	srrt	79	65.880	ENSACLG00000009423	-	76	66.667	Astatotilapia_calliptera
ENSSLDG00000017477	srrt	86	93.382	ENSACLG00000013156	srrt	80	93.382	Astatotilapia_calliptera
ENSSLDG00000017477	srrt	85	81.473	ENSAMXG00000016671	srrt	81	82.262	Astyanax_mexicanus
ENSSLDG00000017477	srrt	81	75.054	ENSBTAG00000001134	SRRT	84	74.194	Bos_taurus
ENSSLDG00000017477	srrt	60	45.985	WBGene00017085	E01A2.2	85	42.916	Caenorhabditis_elegans
ENSSLDG00000017477	srrt	85	74.839	ENSCJAG00000014917	SRRT	84	74.194	Callithrix_jacchus
ENSSLDG00000017477	srrt	81	75.054	ENSCAFG00000023538	SRRT	84	74.194	Canis_familiaris
ENSSLDG00000017477	srrt	83	77.283	ENSCAFG00020013358	SRRT	83	76.615	Canis_lupus_dingo
ENSSLDG00000017477	srrt	84	75.325	ENSCHIG00000010495	SRRT	84	74.194	Capra_hircus
ENSSLDG00000017477	srrt	81	75.541	ENSTSYG00000036426	SRRT	83	74.675	Carlito_syrichta
ENSSLDG00000017477	srrt	85	76.264	ENSCAPG00000013586	SRRT	88	75.165	Cavia_aperea
ENSSLDG00000017477	srrt	86	74.678	ENSCPOG00000001739	SRRT	84	73.820	Cavia_porcellus
ENSSLDG00000017477	srrt	81	75.269	ENSCCAG00000015877	SRRT	84	74.409	Cebus_capucinus
ENSSLDG00000017477	srrt	81	75.541	ENSCATG00000036306	SRRT	84	74.409	Cercocebus_atys
ENSSLDG00000017477	srrt	81	75.054	ENSCLAG00000007568	SRRT	95	65.286	Chinchilla_lanigera
ENSSLDG00000017477	srrt	81	75.269	ENSCSAG00000017996	SRRT	84	74.409	Chlorocebus_sabaeus
ENSSLDG00000017477	srrt	53	74.074	ENSCHOG00000007815	SRRT	67	70.740	Choloepus_hoffmanni
ENSSLDG00000017477	srrt	76	67.170	ENSCPBG00000011553	SRRT	94	52.823	Chrysemys_picta_bellii
ENSSLDG00000017477	srrt	100	42.191	ENSCING00000003506	-	71	51.983	Ciona_intestinalis
ENSSLDG00000017477	srrt	100	42.411	ENSCSAVG00000008394	-	91	44.179	Ciona_savignyi
ENSSLDG00000017477	srrt	81	75.541	ENSCANG00000034556	SRRT	83	74.675	Colobus_angolensis_palliatus
ENSSLDG00000017477	srrt	81	75.484	ENSCGRG00001001594	Srrt	83	74.624	Cricetulus_griseus_chok1gshd
ENSSLDG00000017477	srrt	72	80.392	ENSCGRG00000007292	Srrt	89	71.092	Cricetulus_griseus_crigri
ENSSLDG00000017477	srrt	89	83.893	ENSCSEG00000017878	srrt	83	83.214	Cynoglossus_semilaevis
ENSSLDG00000017477	srrt	54	64.468	ENSCSEG00000005233	-	94	55.030	Cynoglossus_semilaevis
ENSSLDG00000017477	srrt	76	65.438	ENSCVAG00000017344	-	94	56.549	Cyprinodon_variegatus
ENSSLDG00000017477	srrt	95	83.171	ENSCVAG00000019848	srrt	95	85.536	Cyprinodon_variegatus
ENSSLDG00000017477	srrt	87	85.996	ENSDARG00000017762	srrt	81	85.996	Danio_rerio
ENSSLDG00000017477	srrt	81	75.269	ENSDNOG00000003851	SRRT	84	74.409	Dasypus_novemcinctus
ENSSLDG00000017477	srrt	81	75.271	ENSDORG00000005584	Srrt	89	71.274	Dipodomys_ordii
ENSSLDG00000017477	srrt	88	50.830	FBgn0033062	Ars2	68	52.778	Drosophila_melanogaster
ENSSLDG00000017477	srrt	77	72.516	ENSETEG00000016175	SRRT	71	71.670	Echinops_telfairi
ENSSLDG00000017477	srrt	77	53.929	ENSEBUG00000008517	-	88	52.932	Eptatretus_burgeri
ENSSLDG00000017477	srrt	81	75.269	ENSEASG00005016956	SRRT	84	74.409	Equus_asinus_asinus
ENSSLDG00000017477	srrt	81	75.269	ENSECAG00000012292	SRRT	84	74.409	Equus_caballus
ENSSLDG00000017477	srrt	72	77.083	ENSEEUG00000009117	SRRT	70	81.081	Erinaceus_europaeus
ENSSLDG00000017477	srrt	87	85.000	ENSELUG00000006651	srrt	82	85.000	Esox_lucius
ENSSLDG00000017477	srrt	84	66.258	ENSELUG00000021216	-	94	57.751	Esox_lucius
ENSSLDG00000017477	srrt	81	75.269	ENSFCAG00000006855	SRRT	84	74.409	Felis_catus
ENSSLDG00000017477	srrt	81	73.707	ENSFDAG00000021347	SRRT	88	69.248	Fukomys_damarensis
ENSSLDG00000017477	srrt	55	57.884	ENSFHEG00000004105	-	93	58.458	Fundulus_heteroclitus
ENSSLDG00000017477	srrt	79	93.254	ENSFHEG00000002756	srrt	90	93.254	Fundulus_heteroclitus
ENSSLDG00000017477	srrt	68	66.743	ENSGMOG00000018694	-	72	64.365	Gadus_morhua
ENSSLDG00000017477	srrt	91	79.381	ENSGMOG00000018619	srrt	93	71.913	Gadus_morhua
ENSSLDG00000017477	srrt	80	64.474	ENSGAFG00000020383	-	83	64.912	Gambusia_affinis
ENSSLDG00000017477	srrt	87	90.989	ENSGAFG00000005423	srrt	83	90.989	Gambusia_affinis
ENSSLDG00000017477	srrt	80	64.593	ENSGACG00000001100	-	79	63.057	Gasterosteus_aculeatus
ENSSLDG00000017477	srrt	89	92.701	ENSGACG00000020387	srrt	83	92.647	Gasterosteus_aculeatus
ENSSLDG00000017477	srrt	87	75.269	ENSGGOG00000001508	SRRT	84	74.675	Gorilla_gorilla
ENSSLDG00000017477	srrt	86	93.382	ENSHBUG00000002942	srrt	80	93.382	Haplochromis_burtoni
ENSSLDG00000017477	srrt	81	74.518	ENSHGLG00000008344	Srrt	89	70.450	Heterocephalus_glaber_female
ENSSLDG00000017477	srrt	81	75.325	ENSHGLG00100018857	Srrt	89	71.212	Heterocephalus_glaber_male
ENSSLDG00000017477	srrt	80	63.982	ENSHCOG00000008904	-	89	63.920	Hippocampus_comes
ENSSLDG00000017477	srrt	92	87.031	ENSHCOG00000005403	srrt	89	86.765	Hippocampus_comes
ENSSLDG00000017477	srrt	84	82.857	ENSIPUG00000021150	srrt	82	81.718	Ictalurus_punctatus
ENSSLDG00000017477	srrt	87	75.541	ENSSTOG00000013776	SRRT	84	74.675	Ictidomys_tridecemlineatus
ENSSLDG00000017477	srrt	81	76.703	ENSJJAG00000010446	Srrt	89	71.861	Jaculus_jaculus
ENSSLDG00000017477	srrt	79	64.768	ENSKMAG00000008468	-	78	65.319	Kryptolebias_marmoratus
ENSSLDG00000017477	srrt	95	84.625	ENSKMAG00000013599	srrt	95	84.625	Kryptolebias_marmoratus
ENSSLDG00000017477	srrt	53	65.781	ENSLBEG00000028983	-	71	68.571	Labrus_bergylta
ENSSLDG00000017477	srrt	98	87.019	ENSLBEG00000016308	srrt	95	86.436	Labrus_bergylta
ENSSLDG00000017477	srrt	86	72.453	ENSLACG00000001089	SRRT	95	53.231	Latimeria_chalumnae
ENSSLDG00000017477	srrt	81	70.889	ENSLOCG00000013658	srrt	82	71.111	Lepisosteus_oculatus
ENSSLDG00000017477	srrt	81	75.269	ENSLAFG00000007725	SRRT	84	74.409	Loxodonta_africana
ENSSLDG00000017477	srrt	81	75.541	ENSMFAG00000033745	SRRT	87	72.939	Macaca_fascicularis
ENSSLDG00000017477	srrt	81	75.269	ENSMMUG00000021255	SRRT	84	74.409	Macaca_mulatta
ENSSLDG00000017477	srrt	81	75.269	ENSMNEG00000041864	SRRT	84	74.409	Macaca_nemestrina
ENSSLDG00000017477	srrt	81	75.541	ENSMLEG00000029479	SRRT	86	72.939	Mandrillus_leucophaeus
ENSSLDG00000017477	srrt	82	66.667	ENSMAMG00000010681	-	84	68.122	Mastacembelus_armatus
ENSSLDG00000017477	srrt	87	92.647	ENSMAMG00000014311	srrt	83	92.982	Mastacembelus_armatus
ENSSLDG00000017477	srrt	86	93.382	ENSMZEG00005016135	srrt	80	93.382	Maylandia_zebra
ENSSLDG00000017477	srrt	79	66.094	ENSMZEG00005028002	-	76	66.885	Maylandia_zebra
ENSSLDG00000017477	srrt	81	75.054	ENSMAUG00000011386	Srrt	89	70.851	Mesocricetus_auratus
ENSSLDG00000017477	srrt	85	75.269	ENSMICG00000009471	SRRT	82	73.150	Microcebus_murinus
ENSSLDG00000017477	srrt	81	75.269	ENSMOCG00000001971	Srrt	89	71.613	Microtus_ochrogaster
ENSSLDG00000017477	srrt	74	67.609	ENSMMOG00000011137	-	85	65.880	Mola_mola
ENSSLDG00000017477	srrt	95	86.550	ENSMMOG00000016399	srrt	95	85.928	Mola_mola
ENSSLDG00000017477	srrt	54	71.154	ENSMODG00000004862	SRRT	89	71.154	Monodelphis_domestica
ENSSLDG00000017477	srrt	56	53.066	ENSMALG00000005567	-	84	53.778	Monopterus_albus
ENSSLDG00000017477	srrt	81	88.646	ENSMALG00000018604	srrt	86	87.281	Monopterus_albus
ENSSLDG00000017477	srrt	81	76.703	MGP_CAROLIEiJ_G0027870	Srrt	100	71.375	Mus_caroli
ENSSLDG00000017477	srrt	81	76.703	ENSMUSG00000037364	Srrt	99	71.375	Mus_musculus
ENSSLDG00000017477	srrt	81	76.703	MGP_PahariEiJ_G0024456	Srrt	100	71.375	Mus_pahari
ENSSLDG00000017477	srrt	81	76.703	MGP_SPRETEiJ_G0028875	Srrt	100	71.375	Mus_spretus
ENSSLDG00000017477	srrt	85	75.269	ENSMPUG00000015839	SRRT	84	74.409	Mustela_putorius_furo
ENSSLDG00000017477	srrt	85	75.054	ENSMLUG00000009975	SRRT	84	74.194	Myotis_lucifugus
ENSSLDG00000017477	srrt	87	75.269	ENSNGAG00000023715	Srrt	86	74.409	Nannospalax_galili
ENSSLDG00000017477	srrt	88	91.696	ENSNBRG00000019100	srrt	83	91.729	Neolamprologus_brichardi
ENSSLDG00000017477	srrt	85	66.000	ENSNLEG00000011987	SRRT	87	64.615	Nomascus_leucogenys
ENSSLDG00000017477	srrt	87	61.853	ENSMEUG00000011941	SRRT	81	61.207	Notamacropus_eugenii
ENSSLDG00000017477	srrt	63	72.727	ENSOPRG00000002502	-	67	73.485	Ochotona_princeps
ENSSLDG00000017477	srrt	81	76.484	ENSODEG00000016856	SRRT	89	71.429	Octodon_degus
ENSSLDG00000017477	srrt	79	66.667	ENSONIG00000016080	-	76	67.391	Oreochromis_niloticus
ENSSLDG00000017477	srrt	86	92.527	ENSONIG00000004242	srrt	80	92.123	Oreochromis_niloticus
ENSSLDG00000017477	srrt	91	90.446	ENSORLG00000008120	srrt	83	90.789	Oryzias_latipes
ENSSLDG00000017477	srrt	91	90.192	ENSORLG00020003058	srrt	83	90.570	Oryzias_latipes_hni
ENSSLDG00000017477	srrt	91	90.234	ENSORLG00015008062	srrt	83	90.570	Oryzias_latipes_hsok
ENSSLDG00000017477	srrt	98	84.268	ENSOMEG00000003155	srrt	95	83.730	Oryzias_melastigma
ENSSLDG00000017477	srrt	79	68.571	ENSOMEG00000006963	-	80	68.860	Oryzias_melastigma
ENSSLDG00000017477	srrt	81	75.269	ENSOGAG00000017242	SRRT	84	74.409	Otolemur_garnettii
ENSSLDG00000017477	srrt	81	75.325	ENSOARG00000015645	SRRT	83	74.459	Ovis_aries
ENSSLDG00000017477	srrt	85	75.541	ENSPPAG00000041090	SRRT	84	74.675	Pan_paniscus
ENSSLDG00000017477	srrt	81	75.541	ENSPPRG00000009557	SRRT	83	74.675	Panthera_pardus
ENSSLDG00000017477	srrt	87	75.269	ENSPTIG00000014355	SRRT	84	74.409	Panthera_tigris_altaica
ENSSLDG00000017477	srrt	85	75.541	ENSPTRG00000019511	SRRT	84	74.675	Pan_troglodytes
ENSSLDG00000017477	srrt	81	73.784	ENSPANG00000020763	SRRT	85	72.939	Papio_anubis
ENSSLDG00000017477	srrt	85	81.057	ENSPKIG00000022212	-	84	81.057	Paramormyrops_kingsleyae
ENSSLDG00000017477	srrt	91	81.818	ENSPKIG00000005434	srrt	95	73.300	Paramormyrops_kingsleyae
ENSSLDG00000017477	srrt	85	75.938	ENSPSIG00000016311	SRRT	83	75.938	Pelodiscus_sinensis
ENSSLDG00000017477	srrt	89	89.154	ENSPMGG00000002841	srrt	89	87.905	Periophthalmus_magnuspinnatus
ENSSLDG00000017477	srrt	81	76.703	ENSPEMG00000010834	Srrt	89	71.429	Peromyscus_maniculatus_bairdii
ENSSLDG00000017477	srrt	96	55.648	ENSPMAG00000009614	-	95	54.953	Petromyzon_marinus
ENSSLDG00000017477	srrt	87	72.805	ENSPCIG00000000816	SRRT	84	72.805	Phascolarctos_cinereus
ENSSLDG00000017477	srrt	87	91.912	ENSPFOG00000005704	srrt	83	91.912	Poecilia_formosa
ENSSLDG00000017477	srrt	80	64.114	ENSPFOG00000016554	-	94	53.827	Poecilia_formosa
ENSSLDG00000017477	srrt	83	63.974	ENSPLAG00000004526	-	94	55.459	Poecilia_latipinna
ENSSLDG00000017477	srrt	87	91.912	ENSPLAG00000021992	srrt	82	91.912	Poecilia_latipinna
ENSSLDG00000017477	srrt	76	64.096	ENSPMEG00000001520	-	92	53.290	Poecilia_mexicana
ENSSLDG00000017477	srrt	87	91.912	ENSPMEG00000001182	srrt	95	80.075	Poecilia_mexicana
ENSSLDG00000017477	srrt	87	91.912	ENSPREG00000022308	srrt	83	91.912	Poecilia_reticulata
ENSSLDG00000017477	srrt	87	63.448	ENSPPYG00000017432	SRRT	82	65.809	Pongo_abelii
ENSSLDG00000017477	srrt	84	73.150	ENSPCAG00000001621	SRRT	81	72.304	Procavia_capensis
ENSSLDG00000017477	srrt	85	75.541	ENSPCOG00000025751	SRRT	80	74.675	Propithecus_coquereli
ENSSLDG00000017477	srrt	66	67.312	ENSPVAG00000000834	SRRT	85	66.452	Pteropus_vampyrus
ENSSLDG00000017477	srrt	86	93.382	ENSPNYG00000018710	srrt	83	93.382	Pundamilia_nyererei
ENSSLDG00000017477	srrt	89	65.823	ENSPNAG00000010629	srrt	76	68.352	Pygocentrus_nattereri
ENSSLDG00000017477	srrt	54	66.157	ENSRNOG00000048277	AABR07035787.1	92	65.284	Rattus_norvegicus
ENSSLDG00000017477	srrt	81	75.269	ENSRBIG00000035718	SRRT	84	74.409	Rhinopithecus_bieti
ENSSLDG00000017477	srrt	81	75.269	ENSRROG00000030622	SRRT	86	72.939	Rhinopithecus_roxellana
ENSSLDG00000017477	srrt	81	75.541	ENSSBOG00000033570	SRRT	85	74.675	Saimiri_boliviensis_boliviensis
ENSSLDG00000017477	srrt	55	71.047	ENSSHAG00000007349	-	74	72.708	Sarcophilus_harrisii
ENSSLDG00000017477	srrt	85	86.696	ENSSFOG00015017293	srrt	81	86.696	Scleropages_formosus
ENSSLDG00000017477	srrt	95	89.737	ENSSMAG00000015342	srrt	95	89.737	Scophthalmus_maximus
ENSSLDG00000017477	srrt	68	69.231	ENSSMAG00000018195	-	94	54.579	Scophthalmus_maximus
ENSSLDG00000017477	srrt	94	99.681	ENSSDUG00000012049	srrt	100	91.579	Seriola_dumerili
ENSSLDG00000017477	srrt	54	55.626	ENSSDUG00000002051	-	93	55.794	Seriola_dumerili
ENSSLDG00000017477	srrt	72	65.842	ENSSPAG00000018943	-	93	59.430	Stegastes_partitus
ENSSLDG00000017477	srrt	86	94.853	ENSSPAG00000005665	srrt	82	94.853	Stegastes_partitus
ENSSLDG00000017477	srrt	78	74.266	ENSSSCG00000024789	SRRT	86	73.363	Sus_scrofa
ENSSLDG00000017477	srrt	79	62.818	ENSTRUG00000000023	-	78	62.818	Takifugu_rubripes
ENSSLDG00000017477	srrt	89	88.720	ENSTRUG00000016075	srrt	83	88.769	Takifugu_rubripes
ENSSLDG00000017477	srrt	64	87.366	ENSTNIG00000011779	srrt	86	87.420	Tetraodon_nigroviridis
ENSSLDG00000017477	srrt	81	63.017	ENSTNIG00000003111	-	78	64.859	Tetraodon_nigroviridis
ENSSLDG00000017477	srrt	61	77.684	ENSTBEG00000005212	SRRT	57	77.684	Tupaia_belangeri
ENSSLDG00000017477	srrt	89	75.269	ENSTTRG00000011104	SRRT	84	74.409	Tursiops_truncatus
ENSSLDG00000017477	srrt	81	75.269	ENSUAMG00000027997	SRRT	86	74.409	Ursus_americanus
ENSSLDG00000017477	srrt	81	75.269	ENSUMAG00000011295	SRRT	84	74.409	Ursus_maritimus
ENSSLDG00000017477	srrt	81	75.054	ENSVVUG00000023572	SRRT	84	74.194	Vulpes_vulpes
ENSSLDG00000017477	srrt	75	75.843	ENSXETG00000025124	srrt	72	75.796	Xenopus_tropicalis
ENSSLDG00000017477	srrt	55	52.350	ENSXCOG00000013105	-	91	53.965	Xiphophorus_couchianus
ENSSLDG00000017477	srrt	98	83.597	ENSXMAG00000007627	srrt	95	82.793	Xiphophorus_maculatus
ENSSLDG00000017477	srrt	78	63.956	ENSXMAG00000002090	-	80	64.912	Xiphophorus_maculatus