EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSLDG00000017532 (Gene tree)
Gene ID: -
Gene Symbol: sf3b3
Alias: ik:tdsubc_2b2|wu:fb81f05|xx:tdsubc_2b2|zgc:55440
Full Name: splicing factor 3b subunit 3
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 26607 bases
Position: chrPEQF01098176.1:101005-127611
Accession: 111651583
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000022502	CPSF_A	PF03178.15	6.9e-100	1	1
ENSSLDP00000022563	CPSF_A	PF03178.15	4.4e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000023230	-	5327	XM_023401572	ENSSLDP00000022502	1217 (aa)	XP_023257340	UPI000C6FB75F
ENSSLDT00000023292	-	2958	-	ENSSLDP00000022563	985 (aa)	-	-

Gene Model

Click here to download ENSSLDG00000017532's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000017532's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000017532	sf3b3	100	93.509	ENSG00000189091	SF3B3	100	98.246	Homo_sapiens
ENSSLDG00000017532	sf3b3	99	96.138	ENSAPOG00000006172	sf3b3	98	98.634	Acanthochromis_polyacanthus
ENSSLDG00000017532	sf3b3	100	93.361	ENSAMEG00000002187	SF3B3	100	93.361	Ailuropoda_melanoleuca
ENSSLDG00000017532	sf3b3	92	95.804	ENSACIG00000016487	sf3b3	100	95.804	Amphilophus_citrinellus
ENSSLDG00000017532	sf3b3	100	98.603	ENSAOCG00000007158	sf3b3	100	98.603	Amphiprion_ocellaris
ENSSLDG00000017532	sf3b3	100	98.603	ENSAPEG00000022786	sf3b3	100	98.603	Amphiprion_percula
ENSSLDG00000017532	sf3b3	100	99.096	ENSATEG00000013708	sf3b3	100	99.096	Anabas_testudineus
ENSSLDG00000017532	sf3b3	99	90.964	ENSAPLG00000004996	SF3B3	99	93.496	Anas_platyrhynchos
ENSSLDG00000017532	sf3b3	100	93.755	ENSACAG00000001817	SF3B3	100	93.755	Anolis_carolinensis
ENSSLDG00000017532	sf3b3	100	93.509	ENSANAG00000028001	SF3B3	100	93.509	Aotus_nancymaae
ENSSLDG00000017532	sf3b3	99	96.341	ENSACLG00000022555	sf3b3	98	98.804	Astatotilapia_calliptera
ENSSLDG00000017532	sf3b3	100	97.781	ENSAMXG00000003410	sf3b3	100	97.781	Astyanax_mexicanus
ENSSLDG00000017532	sf3b3	100	93.509	ENSBTAG00000010627	SF3B3	100	93.509	Bos_taurus
ENSSLDG00000017532	sf3b3	100	60.016	WBGene00019323	teg-4	100	60.016	Caenorhabditis_elegans
ENSSLDG00000017532	sf3b3	100	93.509	ENSCJAG00000014773	SF3B3	99	93.509	Callithrix_jacchus
ENSSLDG00000017532	sf3b3	100	93.591	ENSCAFG00000020151	SF3B3	100	93.591	Canis_familiaris
ENSSLDG00000017532	sf3b3	100	93.591	ENSCAFG00020020912	SF3B3	100	93.591	Canis_lupus_dingo
ENSSLDG00000017532	sf3b3	100	93.591	ENSCHIG00000019822	SF3B3	100	93.591	Capra_hircus
ENSSLDG00000017532	sf3b3	100	93.509	ENSTSYG00000007910	SF3B3	100	93.509	Carlito_syrichta
ENSSLDG00000017532	sf3b3	84	80.092	ENSCAPG00000001484	SF3B3	92	80.092	Cavia_aperea
ENSSLDG00000017532	sf3b3	100	92.194	ENSCPOG00000000586	SF3B3	100	92.194	Cavia_porcellus
ENSSLDG00000017532	sf3b3	100	93.509	ENSCCAG00000017736	SF3B3	100	93.509	Cebus_capucinus
ENSSLDG00000017532	sf3b3	100	93.509	ENSCATG00000036562	SF3B3	100	93.509	Cercocebus_atys
ENSSLDG00000017532	sf3b3	100	93.509	ENSCLAG00000003921	SF3B3	100	93.509	Chinchilla_lanigera
ENSSLDG00000017532	sf3b3	100	93.509	ENSCSAG00000004371	SF3B3	100	93.509	Chlorocebus_sabaeus
ENSSLDG00000017532	sf3b3	90	90.031	ENSCHOG00000001878	SF3B3	90	90.031	Choloepus_hoffmanni
ENSSLDG00000017532	sf3b3	100	93.180	ENSCPBG00000015853	SF3B3	100	93.180	Chrysemys_picta_bellii
ENSSLDG00000017532	sf3b3	100	79.885	ENSCING00000001342	-	100	79.885	Ciona_intestinalis
ENSSLDG00000017532	sf3b3	99	78.489	ENSCSAVG00000011454	-	100	78.489	Ciona_savignyi
ENSSLDG00000017532	sf3b3	99	91.972	ENSCANG00000042920	SF3B3	100	90.304	Colobus_angolensis_palliatus
ENSSLDG00000017532	sf3b3	100	93.426	ENSCGRG00001015908	Sf3b3	100	93.426	Cricetulus_griseus_chok1gshd
ENSSLDG00000017532	sf3b3	100	93.426	ENSCGRG00000010180	Sf3b3	100	93.426	Cricetulus_griseus_crigri
ENSSLDG00000017532	sf3b3	99	95.939	ENSCSEG00000014192	sf3b3	99	97.206	Cynoglossus_semilaevis
ENSSLDG00000017532	sf3b3	100	97.946	ENSCVAG00000010459	sf3b3	100	97.946	Cyprinodon_variegatus
ENSSLDG00000017532	sf3b3	100	97.206	ENSDARG00000103553	sf3b3	100	97.206	Danio_rerio
ENSSLDG00000017532	sf3b3	85	93.153	ENSDNOG00000043626	SF3B3	100	93.153	Dasypus_novemcinctus
ENSSLDG00000017532	sf3b3	100	93.509	ENSDORG00000014176	Sf3b3	100	93.509	Dipodomys_ordii
ENSSLDG00000017532	sf3b3	100	74.797	FBgn0035162	Sf3b3	100	74.797	Drosophila_melanogaster
ENSSLDG00000017532	sf3b3	84	96.203	ENSETEG00000002729	SF3B3	84	96.203	Echinops_telfairi
ENSSLDG00000017532	sf3b3	100	86.689	ENSEBUG00000006117	sf3b3	100	86.689	Eptatretus_burgeri
ENSSLDG00000017532	sf3b3	100	93.591	ENSEASG00005013376	SF3B3	100	93.591	Equus_asinus_asinus
ENSSLDG00000017532	sf3b3	100	93.591	ENSECAG00000014053	SF3B3	100	93.591	Equus_caballus
ENSSLDG00000017532	sf3b3	93	92.982	ENSEEUG00000015611	SF3B3	93	92.982	Erinaceus_europaeus
ENSSLDG00000017532	sf3b3	100	96.393	ENSELUG00000015417	sf3b3	100	96.393	Esox_lucius
ENSSLDG00000017532	sf3b3	100	93.591	ENSFCAG00000009487	SF3B3	100	93.591	Felis_catus
ENSSLDG00000017532	sf3b3	100	93.262	ENSFALG00000007372	SF3B3	100	93.262	Ficedula_albicollis
ENSSLDG00000017532	sf3b3	100	93.509	ENSFDAG00000002608	SF3B3	100	93.509	Fukomys_damarensis
ENSSLDG00000017532	sf3b3	100	98.685	ENSFHEG00000017824	sf3b3	100	98.685	Fundulus_heteroclitus
ENSSLDG00000017532	sf3b3	100	94.171	ENSGMOG00000008139	sf3b3	100	94.171	Gadus_morhua
ENSSLDG00000017532	sf3b3	100	93.509	ENSGALG00000002531	SF3B3	100	93.509	Gallus_gallus
ENSSLDG00000017532	sf3b3	100	97.946	ENSGAFG00000015206	sf3b3	100	97.946	Gambusia_affinis
ENSSLDG00000017532	sf3b3	100	98.194	ENSGACG00000002646	sf3b3	100	98.194	Gasterosteus_aculeatus
ENSSLDG00000017532	sf3b3	99	91.667	ENSGAGG00000006746	SF3B3	97	93.339	Gopherus_agassizii
ENSSLDG00000017532	sf3b3	100	93.509	ENSGGOG00000003246	SF3B3	100	93.509	Gorilla_gorilla
ENSSLDG00000017532	sf3b3	92	91.786	ENSHBUG00000005960	sf3b3	100	91.786	Haplochromis_burtoni
ENSSLDG00000017532	sf3b3	100	93.509	ENSHGLG00000010135	SF3B3	100	93.509	Heterocephalus_glaber_female
ENSSLDG00000017532	sf3b3	100	91.403	ENSHGLG00100011148	SF3B3	100	91.403	Heterocephalus_glaber_male
ENSSLDG00000017532	sf3b3	100	97.781	ENSHCOG00000011981	sf3b3	100	97.781	Hippocampus_comes
ENSSLDG00000017532	sf3b3	100	97.617	ENSIPUG00000020435	sf3b3	100	97.617	Ictalurus_punctatus
ENSSLDG00000017532	sf3b3	100	93.509	ENSSTOG00000007065	SF3B3	100	93.509	Ictidomys_tridecemlineatus
ENSSLDG00000017532	sf3b3	100	93.509	ENSJJAG00000003948	Sf3b3	100	93.509	Jaculus_jaculus
ENSSLDG00000017532	sf3b3	100	95.974	ENSKMAG00000004066	sf3b3	99	98.121	Kryptolebias_marmoratus
ENSSLDG00000017532	sf3b3	100	98.274	ENSLBEG00000018302	sf3b3	100	98.274	Labrus_bergylta
ENSSLDG00000017532	sf3b3	98	90.282	ENSLACG00000012501	SF3B3	99	90.282	Latimeria_chalumnae
ENSSLDG00000017532	sf3b3	100	96.880	ENSLOCG00000007566	sf3b3	100	96.880	Lepisosteus_oculatus
ENSSLDG00000017532	sf3b3	100	93.591	ENSLAFG00000012219	SF3B3	100	93.591	Loxodonta_africana
ENSSLDG00000017532	sf3b3	100	93.509	ENSMFAG00000045487	SF3B3	100	93.509	Macaca_fascicularis
ENSSLDG00000017532	sf3b3	100	93.509	ENSMMUG00000017812	SF3B3	100	93.509	Macaca_mulatta
ENSSLDG00000017532	sf3b3	100	93.509	ENSMNEG00000033385	SF3B3	100	93.509	Macaca_nemestrina
ENSSLDG00000017532	sf3b3	100	89.975	ENSMLEG00000043891	SF3B3	100	89.975	Mandrillus_leucophaeus
ENSSLDG00000017532	sf3b3	100	99.096	ENSMAMG00000016837	sf3b3	100	99.096	Mastacembelus_armatus
ENSSLDG00000017532	sf3b3	89	95.745	ENSMZEG00005026015	sf3b3	99	95.745	Maylandia_zebra
ENSSLDG00000017532	sf3b3	100	98.850	ENSMZEG00005010836	sf3b3	100	98.850	Maylandia_zebra
ENSSLDG00000017532	sf3b3	100	93.509	ENSMGAG00000001597	SF3B3	100	93.509	Meleagris_gallopavo
ENSSLDG00000017532	sf3b3	81	76.404	ENSMAUG00000013618	Sf3b3	95	77.154	Mesocricetus_auratus
ENSSLDG00000017532	sf3b3	100	92.535	ENSMICG00000001363	SF3B3	100	92.535	Microcebus_murinus
ENSSLDG00000017532	sf3b3	100	93.426	ENSMOCG00000006108	Sf3b3	100	93.426	Microtus_ochrogaster
ENSSLDG00000017532	sf3b3	89	95.745	ENSMMOG00000002598	sf3b3	97	95.745	Mola_mola
ENSSLDG00000017532	sf3b3	100	89.491	ENSMODG00000014363	SF3B3	100	89.491	Monodelphis_domestica
ENSSLDG00000017532	sf3b3	100	98.357	ENSMALG00000008014	sf3b3	100	98.357	Monopterus_albus
ENSSLDG00000017532	sf3b3	100	93.509	MGP_CAROLIEiJ_G0031563	Sf3b3	100	93.509	Mus_caroli
ENSSLDG00000017532	sf3b3	100	93.426	ENSMUSG00000033732	Sf3b3	100	93.426	Mus_musculus
ENSSLDG00000017532	sf3b3	100	93.426	MGP_SPRETEiJ_G0032681	Sf3b3	100	93.426	Mus_spretus
ENSSLDG00000017532	sf3b3	100	93.591	ENSMPUG00000010277	SF3B3	100	93.591	Mustela_putorius_furo
ENSSLDG00000017532	sf3b3	100	93.426	ENSMLUG00000014607	SF3B3	100	93.426	Myotis_lucifugus
ENSSLDG00000017532	sf3b3	100	93.509	ENSNGAG00000021903	Sf3b3	100	93.509	Nannospalax_galili
ENSSLDG00000017532	sf3b3	83	97.222	ENSNBRG00000007197	sf3b3	99	97.222	Neolamprologus_brichardi
ENSSLDG00000017532	sf3b3	100	92.036	ENSNLEG00000016127	SF3B3	100	92.036	Nomascus_leucogenys
ENSSLDG00000017532	sf3b3	92	89.410	ENSMEUG00000004479	SF3B3	94	89.410	Notamacropus_eugenii
ENSSLDG00000017532	sf3b3	98	90.528	ENSOPRG00000009847	SF3B3	100	90.528	Ochotona_princeps
ENSSLDG00000017532	sf3b3	100	93.509	ENSODEG00000014154	SF3B3	100	93.509	Octodon_degus
ENSSLDG00000017532	sf3b3	100	98.932	ENSONIG00000011198	sf3b3	100	98.932	Oreochromis_niloticus
ENSSLDG00000017532	sf3b3	100	93.673	ENSOANG00000001161	-	100	93.673	Ornithorhynchus_anatinus
ENSSLDG00000017532	sf3b3	100	91.537	ENSOCUG00000004139	SF3B3	100	91.537	Oryctolagus_cuniculus
ENSSLDG00000017532	sf3b3	100	97.699	ENSORLG00000013472	sf3b3	100	97.699	Oryzias_latipes
ENSSLDG00000017532	sf3b3	100	97.699	ENSORLG00020017473	sf3b3	100	97.699	Oryzias_latipes_hni
ENSSLDG00000017532	sf3b3	100	97.699	ENSORLG00015007710	sf3b3	100	97.699	Oryzias_latipes_hsok
ENSSLDG00000017532	sf3b3	100	97.699	ENSOMEG00000014483	sf3b3	100	97.699	Oryzias_melastigma
ENSSLDG00000017532	sf3b3	100	93.197	ENSOGAG00000016051	SF3B3	100	93.197	Otolemur_garnettii
ENSSLDG00000017532	sf3b3	100	93.361	ENSOARG00000004816	SF3B3	100	93.361	Ovis_aries
ENSSLDG00000017532	sf3b3	100	93.509	ENSPPAG00000026807	SF3B3	100	93.509	Pan_paniscus
ENSSLDG00000017532	sf3b3	100	93.591	ENSPPRG00000001686	SF3B3	100	93.591	Panthera_pardus
ENSSLDG00000017532	sf3b3	89	90.616	ENSPTIG00000020382	SF3B3	100	90.616	Panthera_tigris_altaica
ENSSLDG00000017532	sf3b3	100	93.509	ENSPTRG00000008308	SF3B3	100	93.509	Pan_troglodytes
ENSSLDG00000017532	sf3b3	100	93.509	ENSPANG00000024075	SF3B3	100	93.509	Papio_anubis
ENSSLDG00000017532	sf3b3	100	97.042	ENSPKIG00000002712	sf3b3	100	97.042	Paramormyrops_kingsleyae
ENSSLDG00000017532	sf3b3	89	93.284	ENSPSIG00000002232	SF3B3	100	93.284	Pelodiscus_sinensis
ENSSLDG00000017532	sf3b3	100	93.426	ENSPEMG00000008603	Sf3b3	100	93.426	Peromyscus_maniculatus_bairdii
ENSSLDG00000017532	sf3b3	100	90.715	ENSPMAG00000001793	sf3b3	100	90.715	Petromyzon_marinus
ENSSLDG00000017532	sf3b3	100	93.673	ENSPCIG00000014927	SF3B3	100	93.673	Phascolarctos_cinereus
ENSSLDG00000017532	sf3b3	100	98.192	ENSPFOG00000015516	sf3b3	100	98.192	Poecilia_formosa
ENSSLDG00000017532	sf3b3	100	98.192	ENSPLAG00000014330	sf3b3	100	98.192	Poecilia_latipinna
ENSSLDG00000017532	sf3b3	100	98.274	ENSPMEG00000019856	sf3b3	100	98.274	Poecilia_mexicana
ENSSLDG00000017532	sf3b3	99	95.547	ENSPREG00000019669	sf3b3	97	98.272	Poecilia_reticulata
ENSSLDG00000017532	sf3b3	95	94.030	ENSPPYG00000007539	SF3B3	100	94.030	Pongo_abelii
ENSSLDG00000017532	sf3b3	100	72.966	ENSPCAG00000002623	SF3B3	100	72.966	Procavia_capensis
ENSSLDG00000017532	sf3b3	84	97.196	ENSPCOG00000026582	SF3B3	100	97.196	Propithecus_coquereli
ENSSLDG00000017532	sf3b3	100	93.509	ENSPVAG00000000684	SF3B3	100	93.509	Pteropus_vampyrus
ENSSLDG00000017532	sf3b3	100	98.767	ENSPNYG00000003528	sf3b3	100	98.767	Pundamilia_nyererei
ENSSLDG00000017532	sf3b3	100	97.453	ENSPNAG00000015419	sf3b3	100	97.453	Pygocentrus_nattereri
ENSSLDG00000017532	sf3b3	100	93.426	ENSRNOG00000017724	Sf3b3	100	93.426	Rattus_norvegicus
ENSSLDG00000017532	sf3b3	100	93.509	ENSRBIG00000021904	SF3B3	100	93.509	Rhinopithecus_bieti
ENSSLDG00000017532	sf3b3	100	93.509	ENSRROG00000045703	SF3B3	100	93.509	Rhinopithecus_roxellana
ENSSLDG00000017532	sf3b3	100	93.509	ENSSBOG00000029156	SF3B3	100	93.509	Saimiri_boliviensis_boliviensis
ENSSLDG00000017532	sf3b3	100	93.673	ENSSHAG00000000372	SF3B3	100	93.673	Sarcophilus_harrisii
ENSSLDG00000017532	sf3b3	100	97.206	ENSSFOG00015012877	sf3b3	100	97.206	Scleropages_formosus
ENSSLDG00000017532	sf3b3	100	98.521	ENSSMAG00000014386	sf3b3	100	98.521	Scophthalmus_maximus
ENSSLDG00000017532	sf3b3	100	99.918	ENSSDUG00000021201	sf3b3	100	99.918	Seriola_dumerili
ENSSLDG00000017532	sf3b3	99	91.870	ENSSARG00000006917	SF3B3	93	93.290	Sorex_araneus
ENSSLDG00000017532	sf3b3	100	93.344	ENSSPUG00000006253	SF3B3	100	93.344	Sphenodon_punctatus
ENSSLDG00000017532	sf3b3	100	91.044	ENSSPAG00000003125	sf3b3	100	91.044	Stegastes_partitus
ENSSLDG00000017532	sf3b3	100	93.591	ENSSSCG00000025323	SF3B3	100	93.591	Sus_scrofa
ENSSLDG00000017532	sf3b3	100	93.432	ENSTGUG00000006082	SF3B3	100	93.432	Taeniopygia_guttata
ENSSLDG00000017532	sf3b3	53	87.692	ENSTRUG00000015623	sf3b3	88	88.095	Takifugu_rubripes
ENSSLDG00000017532	sf3b3	99	95.325	ENSTNIG00000004857	sf3b3	100	97.978	Tetraodon_nigroviridis
ENSSLDG00000017532	sf3b3	92	90.942	ENSTBEG00000002946	SF3B3	100	79.489	Tupaia_belangeri
ENSSLDG00000017532	sf3b3	100	92.769	ENSTTRG00000005855	SF3B3	100	92.769	Tursiops_truncatus
ENSSLDG00000017532	sf3b3	100	93.591	ENSUAMG00000006780	SF3B3	100	93.591	Ursus_americanus
ENSSLDG00000017532	sf3b3	100	93.591	ENSUMAG00000017757	SF3B3	100	93.591	Ursus_maritimus
ENSSLDG00000017532	sf3b3	100	78.554	ENSVPAG00000003202	SF3B3	100	78.554	Vicugna_pacos
ENSSLDG00000017532	sf3b3	100	93.591	ENSVVUG00000017922	SF3B3	100	93.591	Vulpes_vulpes
ENSSLDG00000017532	sf3b3	100	93.837	ENSXETG00000032869	SF3B3	100	93.837	Xenopus_tropicalis
ENSSLDG00000017532	sf3b3	94	95.754	ENSXCOG00000013628	sf3b3	97	98.408	Xiphophorus_couchianus
ENSSLDG00000017532	sf3b3	100	98.192	ENSXMAG00000006334	sf3b3	100	98.192	Xiphophorus_maculatus