EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000017614 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 2354 bases
Position: chrPEQF01099042.1:1988542-1990895
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000022575	zf-C2H2	PF00096.26	4.4e-21	1	4
ENSSLDP00000022575	zf-C2H2	PF00096.26	4.4e-21	2	4
ENSSLDP00000022575	zf-C2H2	PF00096.26	4.4e-21	3	4
ENSSLDP00000022575	zf-C2H2	PF00096.26	4.4e-21	4	4
ENSSLDP00000022575	zf-met	PF12874.7	9.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000023304	-	402	-	ENSSLDP00000022575	133 (aa)	-	-

Gene Model

Click here to download ENSSLDG00000017614's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000017614's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000017614	-	97	42.400	ENSSLDG00000000376	-	69	42.400
ENSSLDG00000017614	-	95	43.137	ENSSLDG00000015116	-	73	43.137
ENSSLDG00000017614	-	92	45.536	ENSSLDG00000010390	-	84	45.536
ENSSLDG00000017614	-	95	38.739	ENSSLDG00000004005	-	71	38.739
ENSSLDG00000017614	-	95	45.679	ENSSLDG00000014166	znf319b	83	37.719
ENSSLDG00000017614	-	85	46.018	ENSSLDG00000000203	-	90	42.857
ENSSLDG00000017614	-	80	47.500	ENSSLDG00000000202	-	65	47.500
ENSSLDG00000017614	-	95	41.667	ENSSLDG00000005868	-	80	41.667
ENSSLDG00000017614	-	98	40.541	ENSSLDG00000023060	-	51	40.541
ENSSLDG00000017614	-	95	45.763	ENSSLDG00000018598	-	76	45.763
ENSSLDG00000017614	-	95	41.667	ENSSLDG00000002776	-	67	41.667
ENSSLDG00000017614	-	95	44.248	ENSSLDG00000020727	-	95	44.248
ENSSLDG00000017614	-	98	41.758	ENSSLDG00000020455	-	80	41.758
ENSSLDG00000017614	-	96	41.964	ENSSLDG00000018493	-	79	41.964
ENSSLDG00000017614	-	95	45.000	ENSSLDG00000004756	-	90	45.000
ENSSLDG00000017614	-	98	39.655	ENSSLDG00000006288	-	89	40.278
ENSSLDG00000017614	-	96	46.667	ENSSLDG00000018033	-	53	46.667
ENSSLDG00000017614	-	98	38.938	ENSSLDG00000012852	snai2	55	38.938
ENSSLDG00000017614	-	95	41.667	ENSSLDG00000006217	-	78	41.667
ENSSLDG00000017614	-	97	43.333	ENSSLDG00000023661	-	73	43.333
ENSSLDG00000017614	-	95	45.000	ENSSLDG00000012133	-	82	45.000
ENSSLDG00000017614	-	95	40.000	ENSSLDG00000005670	-	91	40.000
ENSSLDG00000017614	-	92	50.000	ENSSLDG00000009061	-	91	37.681
ENSSLDG00000017614	-	94	41.667	ENSSLDG00000013170	zbtb17	79	41.379
ENSSLDG00000017614	-	97	42.308	ENSSLDG00000006994	-	84	42.308
ENSSLDG00000017614	-	95	44.681	ENSSLDG00000001860	-	85	43.750
ENSSLDG00000017614	-	92	41.935	ENSSLDG00000018273	-	76	41.935
ENSSLDG00000017614	-	95	44.048	ENSSLDG00000024295	ZNF319	80	44.048
ENSSLDG00000017614	-	97	50.794	ENSSLDG00000005850	-	91	50.794
ENSSLDG00000017614	-	87	42.241	ENSSLDG00000007568	-	71	42.241
ENSSLDG00000017614	-	95	45.161	ENSSLDG00000012320	-	95	45.161
ENSSLDG00000017614	-	95	36.765	ENSSLDG00000002515	-	59	36.765
ENSSLDG00000017614	-	93	40.179	ENSSLDG00000000859	-	72	40.000
ENSSLDG00000017614	-	84	41.667	ENSSLDG00000009582	-	94	41.667
ENSSLDG00000017614	-	95	43.182	ENSSLDG00000000457	-	66	43.182
ENSSLDG00000017614	-	86	43.373	ENSSLDG00000001787	zbtb24	83	43.373
ENSSLDG00000017614	-	96	44.444	ENSSLDG00000016301	-	80	44.444
ENSSLDG00000017614	-	91	38.136	ENSSLDG00000014436	-	73	38.136
ENSSLDG00000017614	-	79	39.423	ENSSLDG00000017166	scrt1b	50	39.423
ENSSLDG00000017614	-	95	49.367	ENSSLDG00000020675	-	95	44.800
ENSSLDG00000017614	-	97	33.871	ENSSLDG00000025359	-	53	33.871
ENSSLDG00000017614	-	84	42.424	ENSSLDG00000004098	-	95	42.424
ENSSLDG00000017614	-	95	39.726	ENSSLDG00000010190	-	77	39.726
ENSSLDG00000017614	-	98	40.517	ENSSLDG00000002756	-	82	40.517
ENSSLDG00000017614	-	98	45.614	ENSSLDG00000017937	-	95	45.536
ENSSLDG00000017614	-	85	37.500	ENSSLDG00000014177	zbtb47b	60	37.500
ENSSLDG00000017614	-	98	46.364	ENSSLDG00000007756	-	94	43.750
ENSSLDG00000017614	-	97	49.558	ENSSLDG00000007524	-	73	49.558
ENSSLDG00000017614	-	96	41.304	ENSSLDG00000013353	prdm5	68	39.286
ENSSLDG00000017614	-	92	41.176	ENSSLDG00000000352	-	68	41.176
ENSSLDG00000017614	-	95	44.643	ENSSLDG00000021278	-	61	44.643
ENSSLDG00000017614	-	92	44.643	ENSSLDG00000016317	-	84	44.643
ENSSLDG00000017614	-	97	47.778	ENSSLDG00000013760	-	94	49.107
ENSSLDG00000017614	-	77	50.000	ENSSLDG00000002284	-	83	50.000
ENSSLDG00000017614	-	83	43.750	ENSSLDG00000015049	-	98	43.750
ENSSLDG00000017614	-	95	46.753	ENSSLDG00000012036	-	96	42.424
ENSSLDG00000017614	-	95	36.111	ENSSLDG00000017718	zbtb48	54	36.111
ENSSLDG00000017614	-	95	44.954	ENSSLDG00000020655	-	56	44.954
ENSSLDG00000017614	-	86	44.615	ENSSLDG00000006724	-	92	44.615
ENSSLDG00000017614	-	100	40.708	ENSSLDG00000004485	-	61	40.708
ENSSLDG00000017614	-	95	41.985	ENSSLDG00000009821	-	78	41.985
ENSSLDG00000017614	-	95	41.964	ENSSLDG00000001850	-	52	42.593
ENSSLDG00000017614	-	95	43.750	ENSSLDG00000008645	-	84	43.750
ENSSLDG00000017614	-	93	47.273	ENSSLDG00000020432	-	85	47.273
ENSSLDG00000017614	-	84	77.477	ENSSLDG00000013823	gfi1b	50	77.477
ENSSLDG00000017614	-	86	43.529	ENSSLDG00000000432	-	82	43.529

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000017614	-	95	71.756	ENSAMEG00000013858	-	90	71.756	Ailuropoda_melanoleuca
ENSSLDG00000017614	-	95	56.154	ENSACIG00000002180	-	96	56.154	Amphilophus_citrinellus
ENSSLDG00000017614	-	83	95.413	ENSACLG00000001258	-	88	95.413	Astatotilapia_calliptera
ENSSLDG00000017614	-	84	74.775	ENSAMXG00000006669	GFI1	54	74.775	Astyanax_mexicanus
ENSSLDG00000017614	-	84	81.651	ENSCAPG00000016268	-	96	81.651	Cavia_aperea
ENSSLDG00000017614	-	95	71.756	ENSCPBG00000015742	-	96	71.756	Chrysemys_picta_bellii
ENSSLDG00000017614	-	84	73.214	ENSCING00000011342	-	87	73.214	Ciona_intestinalis
ENSSLDG00000017614	-	95	69.466	ENSCSAVG00000005904	-	80	69.466	Ciona_savignyi
ENSSLDG00000017614	-	95	71.756	ENSCGRG00000013485	-	96	71.756	Cricetulus_griseus_crigri
ENSSLDG00000017614	-	95	71.756	ENSDORG00000023443	-	96	71.756	Dipodomys_ordii
ENSSLDG00000017614	-	84	80.180	ENSEBUG00000008075	gfi1ab	55	80.180	Eptatretus_burgeri
ENSSLDG00000017614	-	95	71.756	ENSFDAG00000019296	-	96	71.756	Fukomys_damarensis
ENSSLDG00000017614	-	95	71.756	ENSGAGG00000015899	GFI1	96	71.756	Gopherus_agassizii
ENSSLDG00000017614	-	95	71.756	ENSHCOG00000019555	GFI1	55	71.756	Hippocampus_comes
ENSSLDG00000017614	-	84	81.651	ENSJJAG00000022622	-	96	81.651	Jaculus_jaculus
ENSSLDG00000017614	-	83	83.636	ENSLACG00000017590	-	50	83.636	Latimeria_chalumnae
ENSSLDG00000017614	-	95	71.756	ENSMMUG00000005068	GFI1	96	71.756	Macaca_mulatta
ENSSLDG00000017614	-	95	71.212	ENSMGAG00000008187	GFI1	50	71.212	Meleagris_gallopavo
ENSSLDG00000017614	-	95	71.756	ENSMAUG00000021273	-	96	71.756	Mesocricetus_auratus
ENSSLDG00000017614	-	95	71.756	ENSMOCG00000004478	-	96	71.756	Microtus_ochrogaster
ENSSLDG00000017614	-	95	71.756	MGP_CAROLIEiJ_G0027508	Gfi1	96	71.756	Mus_caroli
ENSSLDG00000017614	-	95	71.756	MGP_PahariEiJ_G0017280	Gfi1	96	71.756	Mus_pahari
ENSSLDG00000017614	-	95	71.756	ENSNGAG00000002549	-	96	71.756	Nannospalax_galili
ENSSLDG00000017614	-	83	80.180	ENSNBRG00000001834	-	87	80.180	Neolamprologus_brichardi
ENSSLDG00000017614	-	86	93.860	ENSNBRG00000010351	-	88	93.860	Neolamprologus_brichardi
ENSSLDG00000017614	-	95	71.756	ENSODEG00000006410	-	96	71.756	Octodon_degus
ENSSLDG00000017614	-	95	72.519	ENSOANG00000022289	-	74	72.519	Ornithorhynchus_anatinus
ENSSLDG00000017614	-	95	71.756	ENSORLG00020002817	GFI1	52	71.756	Oryzias_latipes_hni
ENSSLDG00000017614	-	88	76.923	ENSPTIG00000002680	-	87	76.923	Panthera_tigris_altaica
ENSSLDG00000017614	-	84	79.279	ENSPMGG00000011041	GFI1	52	79.279	Periophthalmus_magnuspinnatus
ENSSLDG00000017614	-	95	72.519	ENSPLAG00000010879	gfi1ab	52	72.519	Poecilia_latipinna
ENSSLDG00000017614	-	95	71.756	ENSPREG00000007997	GFI1	51	71.756	Poecilia_reticulata
ENSSLDG00000017614	-	87	92.174	ENSPNYG00000001775	-	90	92.174	Pundamilia_nyererei
ENSSLDG00000017614	-	93	80.556	ENSSFOG00015008114	-	54	79.839	Scleropages_formosus
ENSSLDG00000017614	-	95	72.519	ENSSPAG00000009140	gfi1ab	54	72.519	Stegastes_partitus
ENSSLDG00000017614	-	95	71.756	ENSUMAG00000011251	-	96	71.756	Ursus_maritimus
ENSSLDG00000017614	-	80	79.439	ENSXCOG00000009186	-	86	79.439	Xiphophorus_couchianus