EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSLDG00000017771 (Gene tree)
Gene ID
-
Gene Symbol
rab5c
Alias
wu:fb98b08|wu:fi16g01
Full Name
RAB5C%2C member RAS oncogene family
Gene Type
protein_coding
Species
Seriola_lalandi_dorsalis
Status
putative
Strand
Minus strand
Length
12626 bases
Position
chrPEQF01098544.1:244451-257076
Accession
111652822
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSLDP00000022767MMR_HSR1PF01926.230.0001311
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSLDT00000023500-3603XM_023403198ENSSLDP00000022767220 (aa)XP_023258966UPI000C6FA461
Gene Model
Click here to download ENSSLDG00000017771's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000017771's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSLDG00000017771rab5c5436.975ENSSLDG00000014812rab34b5836.975
ENSSLDG00000017771rab5c7131.875ENSSLDG00000009464rab365931.875
ENSSLDG00000017771rab5c9143.069ENSSLDG00000006014rab18b9543.069
ENSSLDG00000017771rab5c8840.816ENSSLDG00000012474rab6bb9440.816
ENSSLDG00000017771rab5c7550.602ENSSLDG00000020918RAB177350.602
ENSSLDG00000017771rab5c8931.050ENSSLDG00000008070-9031.050
ENSSLDG00000017771rab5c7436.585ENSSLDG00000009068-7736.585
ENSSLDG00000017771rab5c8945.178ENSSLDG00000018942rab1ab9645.178
ENSSLDG00000017771rab5c7447.239ENSSLDG00000020676rab11bb7547.239
ENSSLDG00000017771rab5c8641.270ENSSLDG00000005718-8741.270
ENSSLDG00000017771rab5c7643.452ENSSLDG00000006977rab18a9640.887
ENSSLDG00000017771rab5c8943.367ENSSLDG00000012251rab1ba9643.367
ENSSLDG00000017771rab5c5033.036ENSSLDG00000014472-8734.400
ENSSLDG00000017771rab5c7347.826ENSSLDG00000005275-7447.826
ENSSLDG00000017771rab5c9883.796ENSSLDG00000011069rab5aa9983.796
ENSSLDG00000017771rab5c7339.752ENSSLDG00000023317rab157639.752
ENSSLDG00000017771rab5c9040.404ENSSLDG00000010503rab149240.404
ENSSLDG00000017771rab5c7148.408ENSSLDG00000012116rab11al7348.408
ENSSLDG00000017771rab5c8940.099ENSSLDG00000022533rab309540.099
ENSSLDG00000017771rab5c7945.198ENSSLDG00000012091rab25b8545.198
ENSSLDG00000017771rab5c8941.584ENSSLDG00000009438rab11a9341.584
ENSSLDG00000017771rab5c7644.910ENSSLDG00000015289-8044.910
ENSSLDG00000017771rab5c7532.530ENSSLDG00000022168kras9031.579
ENSSLDG00000017771rab5c7941.954ENSSLDG00000022282rab418241.954
ENSSLDG00000017771rab5c7347.826ENSSLDG00000005221rab11ba7447.826
ENSSLDG00000017771rab5c7233.544ENSSLDG00000000287rab237435.526
ENSSLDG00000017771rab5c8948.469ENSSLDG00000020438rab22a9848.469
ENSSLDG00000017771rab5c7639.286ENSSLDG00000003631si:dkey-16l2.169635.323
ENSSLDG00000017771rab5c7334.337ENSSLDG00000004352-7734.337
ENSSLDG00000017771rab5c7033.117ENSSLDG00000018681rheb8333.117
ENSSLDG00000017771rab5c7039.610ENSSLDG00000021984RAB157339.610
ENSSLDG00000017771rab5c8843.299ENSSLDG00000009725-9243.299
ENSSLDG00000017771rab5c5431.148ENSSLDG00000011226arl8a6131.148
ENSSLDG00000017771rab5c9340.196ENSSLDG00000003264rab6ba9840.196
ENSSLDG00000017771rab5c7633.714ENSSLDG00000000773rab9a8533.714
ENSSLDG00000017771rab5c7842.614ENSSLDG00000024959-8542.614
ENSSLDG00000017771rab5c9138.835ENSSLDG00000012391RAB7A9938.835
ENSSLDG00000017771rab5c9132.212ENSSLDG00000009351rab9b9932.212
ENSSLDG00000017771rab5c7436.585ENSSLDG00000020354rab42a7536.585
ENSSLDG00000017771rab5c6632.877ENSSLDG00000013333si:cabz01085950.17232.877
ENSSLDG00000017771rab5c7637.791ENSSLDG00000022239rab127137.791
ENSSLDG00000017771rab5c8537.500ENSSLDG00000022004rab33a5937.952
ENSSLDG00000017771rab5c8432.804ENSSLDG00000002646si:dkey-34d22.58132.804
ENSSLDG00000017771rab5c8944.898ENSSLDG00000011757-9844.898
ENSSLDG00000017771rab5c7131.250ENSSLDG00000009573rab34a6731.250
ENSSLDG00000017771rab5c7234.969ENSSLDG00000011597si:dkey-13a21.47934.969
ENSSLDG00000017771rab5c8041.143ENSSLDG00000015823-8741.143
ENSSLDG00000017771rab5c7538.596ENSSLDG00000019214zgc:1015597338.596
ENSSLDG00000017771rab5c8335.829ENSSLDG00000008584rab33ba8535.829
ENSSLDG00000017771rab5c8043.182ENSSLDG00000018024zgc:1719278243.182
ENSSLDG00000017771rab5c7430.061ENSSLDG00000025169rhebl18830.061
ENSSLDG00000017771rab5c7437.195ENSSLDG00000006360RAB39B7737.195
ENSSLDG00000017771rab5c5431.967ENSSLDG00000009588arl8bb6231.967
ENSSLDG00000017771rab5c8944.500ENSSLDG00000010880rab25a9444.500
ENSSLDG00000017771rab5c7344.099ENSSLDG00000022555rab2a9639.512
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSLDG00000017771rab5c9890.741ENSG00000108774RAB5C10095.968Homo_sapiens
ENSSLDG00000017771rab5c10095.455ENSAPOG00000016864rab5c10095.455Acanthochromis_polyacanthus
ENSSLDG00000017771rab5c9890.741ENSAMEG00000006003RAB5C9990.741Ailuropoda_melanoleuca
ENSSLDG00000017771rab5c10095.909ENSACIG00000010896rab5c10095.909Amphilophus_citrinellus
ENSSLDG00000017771rab5c10095.455ENSAOCG00000016614rab5c10095.455Amphiprion_ocellaris
ENSSLDG00000017771rab5c9894.907ENSAPEG00000017868-9995.349Amphiprion_percula
ENSSLDG00000017771rab5c9996.313ENSATEG00000001937rab5c9996.313Anabas_testudineus
ENSSLDG00000017771rab5c9392.683ENSANAG00000025390RAB5C10092.683Aotus_nancymaae
ENSSLDG00000017771rab5c9688.679ENSACLG00000008615-10087.387Astatotilapia_calliptera
ENSSLDG00000017771rab5c10094.545ENSACLG00000002706rab5c10094.545Astatotilapia_calliptera
ENSSLDG00000017771rab5c10096.380ENSAMXG00000043717rab5c10096.380Astyanax_mexicanus
ENSSLDG00000017771rab5c9591.346ENSAMXG00000037267-9991.346Astyanax_mexicanus
ENSSLDG00000017771rab5c9890.741ENSBTAG00000006982RAB5C9990.741Bos_taurus
ENSSLDG00000017771rab5c9874.194WBGene00004268rab-59974.194Caenorhabditis_elegans
ENSSLDG00000017771rab5c9890.741ENSCAFG00000015629RAB5C9990.741Canis_familiaris
ENSSLDG00000017771rab5c9890.741ENSCAFG00020013537RAB5C9990.741Canis_lupus_dingo
ENSSLDG00000017771rab5c9890.741ENSCHIG00000012960RAB5C9990.741Capra_hircus
ENSSLDG00000017771rab5c9891.204ENSTSYG00000030531RAB5C9991.204Carlito_syrichta
ENSSLDG00000017771rab5c9890.741ENSCCAG00000025940RAB5C9990.741Cebus_capucinus
ENSSLDG00000017771rab5c9890.741ENSCATG00000040873RAB5C9990.741Cercocebus_atys
ENSSLDG00000017771rab5c9890.741ENSCLAG00000016650RAB5C9990.741Chinchilla_lanigera
ENSSLDG00000017771rab5c8194.944ENSCHOG00000009886RAB5C10094.944Choloepus_hoffmanni
ENSSLDG00000017771rab5c10076.364ENSCING00000003340-10076.364Ciona_intestinalis
ENSSLDG00000017771rab5c9976.444ENSCSAVG00000000613-9983.951Ciona_savignyi
ENSSLDG00000017771rab5c9890.741ENSCGRG00001014226Rab5c9990.741Cricetulus_griseus_chok1gshd
ENSSLDG00000017771rab5c9890.741ENSCGRG00000007534Rab5c9990.741Cricetulus_griseus_crigri
ENSSLDG00000017771rab5c10094.091ENSCSEG00000017024rab5c10094.091Cynoglossus_semilaevis
ENSSLDG00000017771rab5c10095.455ENSCVAG00000009550rab5c10095.455Cyprinodon_variegatus
ENSSLDG00000017771rab5c9890.741ENSDNOG00000038853RAB5C9990.741Dasypus_novemcinctus
ENSSLDG00000017771rab5c9891.667ENSDORG00000006819Rab5c9991.667Dipodomys_ordii
ENSSLDG00000017771rab5c9872.558FBgn0014010Rab59572.558Drosophila_melanogaster
ENSSLDG00000017771rab5c9877.315ENSEBUG00000014794rab5c9977.315Eptatretus_burgeri
ENSSLDG00000017771rab5c9890.741ENSEASG00005009281RAB5C9990.741Equus_asinus_asinus
ENSSLDG00000017771rab5c9891.204ENSECAG00000025054RAB5C9991.204Equus_caballus
ENSSLDG00000017771rab5c9890.741ENSEEUG00000002790RAB5C9990.741Erinaceus_europaeus
ENSSLDG00000017771rab5c9893.981ENSELUG00000018516rab5c9993.981Esox_lucius
ENSSLDG00000017771rab5c10089.545ENSELUG00000010439-10089.545Esox_lucius
ENSSLDG00000017771rab5c9890.741ENSFCAG00000002148RAB5C9990.741Felis_catus
ENSSLDG00000017771rab5c9890.278ENSFDAG00000021541RAB5C9990.278Fukomys_damarensis
ENSSLDG00000017771rab5c9989.498ENSFHEG00000015268-9989.498Fundulus_heteroclitus
ENSSLDG00000017771rab5c10096.818ENSFHEG00000012117rab5c10096.818Fundulus_heteroclitus
ENSSLDG00000017771rab5c7688.095ENSGMOG00000001876-9788.095Gadus_morhua
ENSSLDG00000017771rab5c10094.091ENSGMOG00000015096rab5c10094.091Gadus_morhua
ENSSLDG00000017771rab5c9589.952ENSGAFG00000003642-9987.838Gambusia_affinis
ENSSLDG00000017771rab5c10096.818ENSGAFG00000000884rab5c10096.818Gambusia_affinis
ENSSLDG00000017771rab5c10091.818ENSGACG00000008659rab5c10091.818Gasterosteus_aculeatus
ENSSLDG00000017771rab5c9890.741ENSGGOG00000005472RAB5C9990.741Gorilla_gorilla
ENSSLDG00000017771rab5c10094.545ENSHBUG00000002014rab5c10094.545Haplochromis_burtoni
ENSSLDG00000017771rab5c9688.679ENSHBUG00000006823-10087.387Haplochromis_burtoni
ENSSLDG00000017771rab5c9890.278ENSHGLG00000012067RAB5C9990.278Heterocephalus_glaber_female
ENSSLDG00000017771rab5c9582.857ENSHCOG00000020238-10080.702Hippocampus_comes
ENSSLDG00000017771rab5c10095.023ENSHCOG00000004662rab5c9895.890Hippocampus_comes
ENSSLDG00000017771rab5c9592.823ENSIPUG00000020082rab5c10093.243Ictalurus_punctatus
ENSSLDG00000017771rab5c9890.278ENSSTOG00000006620RAB5C9990.278Ictidomys_tridecemlineatus
ENSSLDG00000017771rab5c9891.204ENSJJAG00000021181Rab5c9991.204Jaculus_jaculus
ENSSLDG00000017771rab5c9989.041ENSKMAG00000017417-9989.041Kryptolebias_marmoratus
ENSSLDG00000017771rab5c10095.909ENSKMAG00000020038rab5c10095.909Kryptolebias_marmoratus
ENSSLDG00000017771rab5c10089.140ENSLBEG00000010408-10089.140Labrus_bergylta
ENSSLDG00000017771rab5c10097.273ENSLBEG00000004128rab5c10097.273Labrus_bergylta
ENSSLDG00000017771rab5c9893.519ENSLOCG00000012566rab5c10093.519Lepisosteus_oculatus
ENSSLDG00000017771rab5c9890.741ENSMFAG00000039627RAB5C9990.741Macaca_fascicularis
ENSSLDG00000017771rab5c9890.741ENSMNEG00000000355RAB5C9990.741Macaca_nemestrina
ENSSLDG00000017771rab5c10095.909ENSMAMG00000022322rab5c10095.909Mastacembelus_armatus
ENSSLDG00000017771rab5c9989.954ENSMAMG00000016207-9989.954Mastacembelus_armatus
ENSSLDG00000017771rab5c9688.679ENSMZEG00005021090-10087.387Maylandia_zebra
ENSSLDG00000017771rab5c10094.545ENSMZEG00005022735rab5c10094.545Maylandia_zebra
ENSSLDG00000017771rab5c9891.204ENSMAUG00000015005Rab5c9991.204Mesocricetus_auratus
ENSSLDG00000017771rab5c9891.204ENSMICG00000041608RAB5C9991.204Microcebus_murinus
ENSSLDG00000017771rab5c9891.204ENSMOCG00000018531-9991.204Microtus_ochrogaster
ENSSLDG00000017771rab5c10095.455ENSMMOG00000020621rab5c10095.455Mola_mola
ENSSLDG00000017771rab5c9988.128ENSMALG00000022348-9988.128Monopterus_albus
ENSSLDG00000017771rab5c9889.302ENSMALG00000006052rab5c9789.498Monopterus_albus
ENSSLDG00000017771rab5c9891.204MGP_CAROLIEiJ_G0017184Rab5c9991.204Mus_caroli
ENSSLDG00000017771rab5c9891.204ENSMUSG00000019173Rab5c9991.204Mus_musculus
ENSSLDG00000017771rab5c9891.204MGP_PahariEiJ_G0018314Rab5c9991.204Mus_pahari
ENSSLDG00000017771rab5c9891.204MGP_SPRETEiJ_G0018027Rab5c9991.204Mus_spretus
ENSSLDG00000017771rab5c9890.741ENSMPUG00000010554RAB5C9990.741Mustela_putorius_furo
ENSSLDG00000017771rab5c9890.741ENSNGAG00000010286Rab5c9990.741Nannospalax_galili
ENSSLDG00000017771rab5c10095.455ENSNBRG00000018165rab5c10095.455Neolamprologus_brichardi
ENSSLDG00000017771rab5c9688.679ENSNBRG00000016922-10087.387Neolamprologus_brichardi
ENSSLDG00000017771rab5c8188.764ENSOPRG00000008255RAB5C10088.764Ochotona_princeps
ENSSLDG00000017771rab5c9890.278ENSODEG00000017920RAB5C9990.278Octodon_degus
ENSSLDG00000017771rab5c10095.455ENSONIG00000001113rab5c10095.455Oreochromis_niloticus
ENSSLDG00000017771rab5c9994.931ENSORLG00000003882rab5c9994.931Oryzias_latipes
ENSSLDG00000017771rab5c9995.392ENSORLG00020008388rab5c9995.392Oryzias_latipes_hni
ENSSLDG00000017771rab5c9994.931ENSORLG00015021900rab5c9994.931Oryzias_latipes_hsok
ENSSLDG00000017771rab5c9994.931ENSOMEG00000023078rab5c9994.931Oryzias_melastigma
ENSSLDG00000017771rab5c9891.204ENSOGAG00000009456RAB5C9991.204Otolemur_garnettii
ENSSLDG00000017771rab5c9890.741ENSOARG00000018768RAB5C9990.741Ovis_aries
ENSSLDG00000017771rab5c9890.741ENSPPAG00000037206RAB5C9990.741Pan_paniscus
ENSSLDG00000017771rab5c9890.741ENSPPRG00000005745RAB5C9990.741Panthera_pardus
ENSSLDG00000017771rab5c9890.741ENSPTIG00000008177RAB5C9990.741Panthera_tigris_altaica
ENSSLDG00000017771rab5c9890.741ENSPTRG00000009194RAB5C9990.741Pan_troglodytes
ENSSLDG00000017771rab5c9888.426ENSPKIG00000001237-9988.426Paramormyrops_kingsleyae
ENSSLDG00000017771rab5c9887.963ENSPKIG00000020112-9987.963Paramormyrops_kingsleyae
ENSSLDG00000017771rab5c10091.818ENSPMGG00000010792rab5c9993.488Periophthalmus_magnuspinnatus
ENSSLDG00000017771rab5c9891.204ENSPEMG00000017971Rab5c9991.204Peromyscus_maniculatus_bairdii
ENSSLDG00000017771rab5c9878.281ENSPMAG00000000008rab5c9978.281Petromyzon_marinus
ENSSLDG00000017771rab5c8781.771ENSPMAG00000007867rab5c9181.771Petromyzon_marinus
ENSSLDG00000017771rab5c9976.959ENSPMAG00000001399rab5c10076.959Petromyzon_marinus
ENSSLDG00000017771rab5c9890.741ENSPCIG00000020225-9990.741Phascolarctos_cinereus
ENSSLDG00000017771rab5c9989.041ENSPLAG00000016333-10089.041Poecilia_latipinna
ENSSLDG00000017771rab5c10096.818ENSPLAG00000004790rab5c10096.818Poecilia_latipinna
ENSSLDG00000017771rab5c9690.141ENSPMEG00000012614-10088.789Poecilia_mexicana
ENSSLDG00000017771rab5c10096.818ENSPMEG00000011336rab5c10096.818Poecilia_mexicana
ENSSLDG00000017771rab5c10096.818ENSPREG00000010146rab5c10096.818Poecilia_reticulata
ENSSLDG00000017771rab5c8591.534ENSPREG00000022167-8992.896Poecilia_reticulata
ENSSLDG00000017771rab5c9890.741ENSPPYG00000008398RAB5C9990.741Pongo_abelii
ENSSLDG00000017771rab5c9889.815ENSPCAG00000016412RAB5C9989.815Procavia_capensis
ENSSLDG00000017771rab5c9890.741ENSPCOG00000026327RAB5C9990.741Propithecus_coquereli
ENSSLDG00000017771rab5c9891.204ENSPVAG00000003867RAB5C9991.204Pteropus_vampyrus
ENSSLDG00000017771rab5c9688.679ENSPNYG00000015851-10087.387Pundamilia_nyererei
ENSSLDG00000017771rab5c10094.545ENSPNYG00000010615rab5c10094.545Pundamilia_nyererei
ENSSLDG00000017771rab5c10095.475ENSPNAG00000028138rab5c10095.475Pygocentrus_nattereri
ENSSLDG00000017771rab5c9588.995ENSPNAG00000002218-9888.995Pygocentrus_nattereri
ENSSLDG00000017771rab5c9891.204ENSRNOG00000018568Rab5c9991.204Rattus_norvegicus
ENSSLDG00000017771rab5c9890.741ENSRBIG00000031376RAB5C9990.741Rhinopithecus_bieti
ENSSLDG00000017771rab5c9890.741ENSRROG00000032895RAB5C9990.741Rhinopithecus_roxellana
ENSSLDG00000017771rab5c9890.741ENSSBOG00000032552-9990.741Saimiri_boliviensis_boliviensis
ENSSLDG00000017771rab5c9891.204ENSSHAG00000005267-9991.204Sarcophilus_harrisii
ENSSLDG00000017771rab5c10086.364ENSSFOG00015009988-10086.364Scleropages_formosus
ENSSLDG00000017771rab5c9596.172ENSSMAG00000007323rab5c10095.455Scophthalmus_maximus
ENSSLDG00000017771rab5c10099.091ENSSDUG00000023008rab5c10099.091Seriola_dumerili
ENSSLDG00000017771rab5c9892.593ENSSPUG00000012950-9992.593Sphenodon_punctatus
ENSSLDG00000017771rab5c10096.818ENSSPAG00000006436rab5c10096.818Stegastes_partitus
ENSSLDG00000017771rab5c9890.741ENSSSCG00000032467RAB5C9990.741Sus_scrofa
ENSSLDG00000017771rab5c10094.091ENSTRUG00000015590rab5c10094.091Takifugu_rubripes
ENSSLDG00000017771rab5c9695.735ENSTNIG00000011711rab5c9595.735Tetraodon_nigroviridis
ENSSLDG00000017771rab5c9890.741ENSTBEG00000007092RAB5C9990.741Tupaia_belangeri
ENSSLDG00000017771rab5c9890.278ENSTTRG00000006673RAB5C9990.278Tursiops_truncatus
ENSSLDG00000017771rab5c9890.741ENSUAMG00000024343RAB5C9990.741Ursus_americanus
ENSSLDG00000017771rab5c9890.741ENSUMAG00000023270RAB5C9990.741Ursus_maritimus
ENSSLDG00000017771rab5c10096.818ENSXCOG00000016788rab5c10096.818Xiphophorus_couchianus
ENSSLDG00000017771rab5c9590.431ENSXCOG00000006300-9988.288Xiphophorus_couchianus
ENSSLDG00000017771rab5c10096.818ENSXMAG00000003266rab5c10096.818Xiphophorus_maculatus
ENSSLDG00000017771rab5c9988.584ENSXMAG00000022179-10088.584Xiphophorus_maculatus

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