EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSLDG00000017802 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: zinc finger matrin-type protein 1-like
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 6696 bases
Position: chrPEQF01099343.1:2090337-2097032
Accession: 111670938
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000022818	zf-met	PF12874.7	2e-23	1	4
ENSSLDP00000022818	zf-met	PF12874.7	2e-23	2	4
ENSSLDP00000022818	zf-met	PF12874.7	2e-23	3	4
ENSSLDP00000022818	zf-met	PF12874.7	2e-23	4	4
ENSSLDP00000022818	zf-C2H2_jaz	PF12171.8	1e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000023552	-	1623	XM_023427916	ENSSLDP00000022818	541 (aa)	XP_023283684	-

Gene Model

Click here to download ENSSLDG00000017802's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000017802's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000017802	-	100	61.989	ENSACIG00000003672	-	99	62.664	Amphilophus_citrinellus
ENSSLDG00000017802	-	84	64.024	ENSAPEG00000002169	-	95	62.398	Amphiprion_percula
ENSSLDG00000017802	-	70	55.294	ENSGAFG00000021491	-	70	55.431	Gambusia_affinis
ENSSLDG00000017802	-	100	49.570	ENSKMAG00000018937	-	62	52.308	Kryptolebias_marmoratus
ENSSLDG00000017802	-	97	32.045	ENSLACG00000004486	-	57	39.937	Latimeria_chalumnae
ENSSLDG00000017802	-	100	67.785	ENSMAMG00000018920	-	97	67.617	Mastacembelus_armatus
ENSSLDG00000017802	-	99	66.055	ENSNBRG00000018883	-	97	61.522	Neolamprologus_brichardi
ENSSLDG00000017802	-	69	55.982	ENSONIG00000020374	-	80	55.612	Oreochromis_niloticus
ENSSLDG00000017802	-	100	49.231	ENSORLG00000026368	-	68	54.040	Oryzias_latipes
ENSSLDG00000017802	-	100	49.231	ENSORLG00020000211	-	68	54.040	Oryzias_latipes_hni
ENSSLDG00000017802	-	100	48.123	ENSORLG00015004724	-	68	53.030	Oryzias_latipes_hsok
ENSSLDG00000017802	-	100	51.215	ENSOMEG00000002792	-	68	55.784	Oryzias_melastigma
ENSSLDG00000017802	-	100	45.546	ENSPFOG00000010723	-	63	51.491	Poecilia_formosa
ENSSLDG00000017802	-	100	45.714	ENSPLAG00000012038	-	66	51.491	Poecilia_latipinna
ENSSLDG00000017802	-	100	46.589	ENSPMEG00000020927	-	68	49.257	Poecilia_mexicana
ENSSLDG00000017802	-	89	46.197	ENSPREG00000020523	-	66	49.565	Poecilia_reticulata
ENSSLDG00000017802	-	94	58.868	ENSPNYG00000003309	-	65	61.628	Pundamilia_nyererei
ENSSLDG00000017802	-	100	46.399	ENSXMAG00000002135	-	69	49.140	Xiphophorus_maculatus