EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000017803 (Gene tree)
Gene ID: -
Gene Symbol: alyref
Alias: tho4|thoc4|zgc:171753
Full Name: Aly/REF export factor
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 2669 bases
Position: chrPEQF01099472.1:1291503-1294171
Accession: 111647521
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000022811	RRM_1	PF00076.22	1.4e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000023545	-	822	XM_023397135	ENSSLDP00000022811	273 (aa)	XP_023252903	UPI000C6FA182

Gene Model

Click here to download ENSSLDG00000017803's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000017803's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000017803	alyref	100	50.534	ENSSLDG00000005386	-	100	51.971

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000017803	alyref	100	52.347	ENSAPOG00000000183	-	100	51.625	Acanthochromis_polyacanthus
ENSSLDG00000017803	alyref	99	80.515	ENSACIG00000006351	alyref	98	79.197	Amphilophus_citrinellus
ENSSLDG00000017803	alyref	100	50.000	ENSACIG00000020351	-	100	49.648	Amphilophus_citrinellus
ENSSLDG00000017803	alyref	100	96.337	ENSAOCG00000014012	alyref	100	96.337	Amphiprion_ocellaris
ENSSLDG00000017803	alyref	100	49.819	ENSAOCG00000019305	-	100	50.903	Amphiprion_ocellaris
ENSSLDG00000017803	alyref	100	96.337	ENSAPEG00000014603	alyref	100	96.337	Amphiprion_percula
ENSSLDG00000017803	alyref	100	50.542	ENSAPEG00000013527	-	100	50.903	Amphiprion_percula
ENSSLDG00000017803	alyref	100	79.856	ENSATEG00000004307	alyref	100	82.374	Anabas_testudineus
ENSSLDG00000017803	alyref	100	55.957	ENSATEG00000000382	-	100	53.791	Anabas_testudineus
ENSSLDG00000017803	alyref	51	71.034	ENSAPLG00000014745	-	100	70.922	Anas_platyrhynchos
ENSSLDG00000017803	alyref	100	87.179	ENSACLG00000008432	alyref	100	87.179	Astatotilapia_calliptera
ENSSLDG00000017803	alyref	100	55.160	ENSACLG00000010184	-	100	52.837	Astatotilapia_calliptera
ENSSLDG00000017803	alyref	100	74.021	ENSAMXG00000007359	alyref	100	72.598	Astyanax_mexicanus
ENSSLDG00000017803	alyref	99	48.175	ENSCING00000013568	-	99	47.101	Ciona_intestinalis
ENSSLDG00000017803	alyref	99	44.000	ENSCSAVG00000003324	-	99	43.066	Ciona_savignyi
ENSSLDG00000017803	alyref	100	81.387	ENSCSEG00000017800	alyref	100	80.952	Cynoglossus_semilaevis
ENSSLDG00000017803	alyref	100	83.150	ENSCVAG00000014869	alyref	100	79.487	Cyprinodon_variegatus
ENSSLDG00000017803	alyref	100	48.727	ENSCVAG00000007789	-	100	45.161	Cyprinodon_variegatus
ENSSLDG00000017803	alyref	100	79.859	ENSDARG00000077732	alyref	100	72.438	Danio_rerio
ENSSLDG00000017803	alyref	97	45.263	FBgn0010774	Ref1	73	46.305	Drosophila_melanogaster
ENSSLDG00000017803	alyref	99	50.370	ENSEBUG00000008253	alyref	95	47.037	Eptatretus_burgeri
ENSSLDG00000017803	alyref	72	44.828	ENSEBUG00000006305	alyref	100	38.163	Eptatretus_burgeri
ENSSLDG00000017803	alyref	100	68.817	ENSELUG00000008849	-	100	65.233	Esox_lucius
ENSSLDG00000017803	alyref	100	75.812	ENSELUG00000017178	alyref	100	69.424	Esox_lucius
ENSSLDG00000017803	alyref	59	78.049	ENSFALG00000011923	-	96	72.611	Ficedula_albicollis
ENSSLDG00000017803	alyref	100	49.819	ENSFHEG00000004698	-	100	45.487	Fundulus_heteroclitus
ENSSLDG00000017803	alyref	100	85.401	ENSFHEG00000019426	alyref	100	85.036	Fundulus_heteroclitus
ENSSLDG00000017803	alyref	100	72.364	ENSGMOG00000009882	alyref	100	70.182	Gadus_morhua
ENSSLDG00000017803	alyref	69	59.794	ENSGMOG00000013122	-	100	58.333	Gadus_morhua
ENSSLDG00000017803	alyref	100	47.653	ENSGAFG00000007573	-	100	47.292	Gambusia_affinis
ENSSLDG00000017803	alyref	100	83.394	ENSGAFG00000006014	alyref	100	79.061	Gambusia_affinis
ENSSLDG00000017803	alyref	100	87.179	ENSHBUG00000020196	alyref	100	87.179	Haplochromis_burtoni
ENSSLDG00000017803	alyref	100	54.965	ENSHBUG00000001454	-	100	53.901	Haplochromis_burtoni
ENSSLDG00000017803	alyref	98	49.259	ENSHCOG00000012825	-	94	48.889	Hippocampus_comes
ENSSLDG00000017803	alyref	100	73.835	ENSIPUG00000009469	alyref	100	70.609	Ictalurus_punctatus
ENSSLDG00000017803	alyref	74	64.216	ENSSTOG00000016570	-	92	60.825	Ictidomys_tridecemlineatus
ENSSLDG00000017803	alyref	100	51.449	ENSKMAG00000006462	-	100	51.087	Kryptolebias_marmoratus
ENSSLDG00000017803	alyref	100	81.818	ENSKMAG00000008912	alyref	100	83.636	Kryptolebias_marmoratus
ENSSLDG00000017803	alyref	100	49.488	ENSLBEG00000005387	-	66	55.051	Labrus_bergylta
ENSSLDG00000017803	alyref	99	49.097	ENSLBEG00000012930	-	99	48.905	Labrus_bergylta
ENSSLDG00000017803	alyref	100	84.173	ENSLBEG00000023118	alyref	90	80.216	Labrus_bergylta
ENSSLDG00000017803	alyref	78	72.811	ENSLOCG00000013879	alyref	89	70.968	Lepisosteus_oculatus
ENSSLDG00000017803	alyref	100	91.575	ENSMAMG00000003034	alyref	100	90.110	Mastacembelus_armatus
ENSSLDG00000017803	alyref	100	50.542	ENSMAMG00000005464	-	100	49.097	Mastacembelus_armatus
ENSSLDG00000017803	alyref	100	87.179	ENSMZEG00005008639	alyref	100	87.179	Maylandia_zebra
ENSSLDG00000017803	alyref	100	54.093	ENSMZEG00005012096	-	100	52.482	Maylandia_zebra
ENSSLDG00000017803	alyref	99	45.324	ENSMMOG00000007032	-	98	44.056	Mola_mola
ENSSLDG00000017803	alyref	99	88.519	ENSMMOG00000012458	alyref	97	83.516	Mola_mola
ENSSLDG00000017803	alyref	100	53.472	ENSMALG00000006054	-	100	48.029	Monopterus_albus
ENSSLDG00000017803	alyref	98	54.122	ENSMLUG00000028605	-	98	54.480	Myotis_lucifugus
ENSSLDG00000017803	alyref	100	59.574	ENSMLUG00000004098	-	100	60.440	Myotis_lucifugus
ENSSLDG00000017803	alyref	98	54.167	ENSMLUG00000022467	-	98	51.971	Myotis_lucifugus
ENSSLDG00000017803	alyref	98	56.044	ENSMLUG00000022178	-	98	55.147	Myotis_lucifugus
ENSSLDG00000017803	alyref	98	57.762	ENSMLUG00000030671	-	99	54.448	Myotis_lucifugus
ENSSLDG00000017803	alyref	100	60.714	ENSMLUG00000014372	-	100	60.714	Myotis_lucifugus
ENSSLDG00000017803	alyref	100	60.000	ENSMLUG00000006521	-	100	57.447	Myotis_lucifugus
ENSSLDG00000017803	alyref	98	54.244	ENSMLUG00000009247	-	98	53.506	Myotis_lucifugus
ENSSLDG00000017803	alyref	100	69.963	ENSNGAG00000022014	-	100	65.201	Nannospalax_galili
ENSSLDG00000017803	alyref	100	84.000	ENSNBRG00000001747	alyref	100	86.545	Neolamprologus_brichardi
ENSSLDG00000017803	alyref	100	55.197	ENSNBRG00000017460	-	100	53.571	Neolamprologus_brichardi
ENSSLDG00000017803	alyref	100	55.596	ENSONIG00000003296	-	100	54.676	Oreochromis_niloticus
ENSSLDG00000017803	alyref	100	83.453	ENSONIG00000019434	alyref	100	85.252	Oreochromis_niloticus
ENSSLDG00000017803	alyref	99	39.873	ENSORLG00000001620	-	58	47.642	Oryzias_latipes
ENSSLDG00000017803	alyref	99	49.275	ENSORLG00020015673	-	99	44.369	Oryzias_latipes_hni
ENSSLDG00000017803	alyref	100	84.000	ENSORLG00020011942	alyref	100	81.455	Oryzias_latipes_hni
ENSSLDG00000017803	alyref	100	86.081	ENSORLG00015022664	alyref	100	82.784	Oryzias_latipes_hsok
ENSSLDG00000017803	alyref	99	47.826	ENSORLG00015015143	-	99	43.345	Oryzias_latipes_hsok
ENSSLDG00000017803	alyref	99	46.886	ENSOMEG00000007158	-	97	44.118	Oryzias_melastigma
ENSSLDG00000017803	alyref	100	83.942	ENSOMEG00000019176	alyref	100	76.642	Oryzias_melastigma
ENSSLDG00000017803	alyref	70	77.368	ENSPPAG00000036403	-	68	74.211	Pan_paniscus
ENSSLDG00000017803	alyref	99	72.628	ENSPKIG00000006233	-	81	65.328	Paramormyrops_kingsleyae
ENSSLDG00000017803	alyref	100	74.638	ENSPKIG00000007070	alyref	100	71.014	Paramormyrops_kingsleyae
ENSSLDG00000017803	alyref	71	48.205	ENSPMGG00000012994	-	97	45.641	Periophthalmus_magnuspinnatus
ENSSLDG00000017803	alyref	99	75.926	ENSPMGG00000016600	alyref	91	77.289	Periophthalmus_magnuspinnatus
ENSSLDG00000017803	alyref	100	64.469	ENSPEMG00000016628	-	100	60.806	Peromyscus_maniculatus_bairdii
ENSSLDG00000017803	alyref	100	47.163	ENSPFOG00000017094	-	100	44.043	Poecilia_formosa
ENSSLDG00000017803	alyref	100	78.417	ENSPFOG00000022825	alyref	99	78.058	Poecilia_formosa
ENSSLDG00000017803	alyref	100	47.163	ENSPLAG00000014380	-	100	44.043	Poecilia_latipinna
ENSSLDG00000017803	alyref	100	79.061	ENSPLAG00000006948	alyref	100	78.339	Poecilia_latipinna
ENSSLDG00000017803	alyref	100	78.417	ENSPMEG00000003547	alyref	100	78.058	Poecilia_mexicana
ENSSLDG00000017803	alyref	100	47.163	ENSPMEG00000023039	-	100	44.043	Poecilia_mexicana
ENSSLDG00000017803	alyref	100	79.422	ENSPREG00000015795	alyref	100	78.700	Poecilia_reticulata
ENSSLDG00000017803	alyref	100	46.403	ENSPREG00000003649	-	100	45.455	Poecilia_reticulata
ENSSLDG00000017803	alyref	99	52.174	ENSPNYG00000002879	-	98	50.181	Pundamilia_nyererei
ENSSLDG00000017803	alyref	100	87.179	ENSPNYG00000017498	alyref	100	87.179	Pundamilia_nyererei
ENSSLDG00000017803	alyref	100	77.338	ENSPNAG00000002531	alyref	100	71.480	Pygocentrus_nattereri
ENSSLDG00000017803	alyref	73	76.000	ENSSBOG00000030924	-	87	72.864	Saimiri_boliviensis_boliviensis
ENSSLDG00000017803	alyref	99	54.909	ENSSHAG00000012866	-	99	51.648	Sarcophilus_harrisii
ENSSLDG00000017803	alyref	99	55.872	ENSSHAG00000000609	-	99	53.091	Sarcophilus_harrisii
ENSSLDG00000017803	alyref	95	64.865	ENSSFOG00015003923	alyref	73	72.430	Scleropages_formosus
ENSSLDG00000017803	alyref	70	77.604	ENSSFOG00015003678	alyref	83	70.312	Scleropages_formosus
ENSSLDG00000017803	alyref	100	85.507	ENSSMAG00000009283	alyref	100	80.797	Scophthalmus_maximus
ENSSLDG00000017803	alyref	100	51.957	ENSSMAG00000011169	-	100	54.774	Scophthalmus_maximus
ENSSLDG00000017803	alyref	100	99.267	ENSSDUG00000016158	alyref	100	99.267	Seriola_dumerili
ENSSLDG00000017803	alyref	99	52.555	ENSSPAG00000017028	-	96	51.095	Stegastes_partitus
ENSSLDG00000017803	alyref	100	51.943	ENSTRUG00000003051	-	100	47.842	Takifugu_rubripes
ENSSLDG00000017803	alyref	100	75.090	ENSTNIG00000011595	alyref	100	70.438	Tetraodon_nigroviridis
ENSSLDG00000017803	alyref	100	50.725	ENSTNIG00000014136	-	100	46.014	Tetraodon_nigroviridis
ENSSLDG00000017803	alyref	86	68.376	ENSVVUG00000000272	-	82	75.648	Vulpes_vulpes
ENSSLDG00000017803	alyref	99	82.482	ENSXCOG00000018047	alyref	99	77.256	Xiphophorus_couchianus
ENSSLDG00000017803	alyref	99	82.482	ENSXMAG00000012218	alyref	99	77.256	Xiphophorus_maculatus
ENSSLDG00000017803	alyref	100	48.214	ENSXMAG00000018086	-	100	45.126	Xiphophorus_maculatus