EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000017818 (Gene tree)
Gene ID: -
Gene Symbol: chd9
Alias: fb08b06|fb34c12|wu:fb08b06|wu:fb34c12
Full Name: chromodomain helicase DNA binding protein 9
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 70611 bases
Position: chrPEQF01099376.1:6128012-6198622
Accession: 111672283
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000023033	ResIII	PF04851.15	1.9e-05	1	1
ENSSLDP00000023137	ResIII	PF04851.15	2e-05	1	1
ENSSLDP00000023033	BRK	PF07533.16	1.9e-32	1	2
ENSSLDP00000023033	BRK	PF07533.16	1.9e-32	2	2
ENSSLDP00000023137	BRK	PF07533.16	3e-32	1	2
ENSSLDP00000023137	BRK	PF07533.16	3e-32	2	2
ENSSLDP00000022970	BRK	PF07533.16	3.4e-32	1	2
ENSSLDP00000022970	BRK	PF07533.16	3.4e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000023709	-	12364	XM_023429670	ENSSLDP00000022970	3023 (aa)	XP_023285438	UPI000C6FB0C3
ENSSLDT00000023879	-	8643	-	ENSSLDP00000023137	2880 (aa)	-	-
ENSSLDT00000023773	-	10608	XM_023429673	ENSSLDP00000023033	2501 (aa)	XP_023285441	UPI000C6F91EC

Gene Model

Click here to download ENSSLDG00000017818's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000017818's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000017818	chd9	69	61.003	ENSSLDG00000001679	chd8	70	60.640

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000017818	chd9	99	68.532	ENSG00000177200	CHD9	91	76.699	Homo_sapiens
ENSSLDG00000017818	chd9	99	93.873	ENSAPOG00000023034	chd9	99	93.591	Acanthochromis_polyacanthus
ENSSLDG00000017818	chd9	98	68.830	ENSAMEG00000016232	CHD9	84	71.201	Ailuropoda_melanoleuca
ENSSLDG00000017818	chd9	97	87.608	ENSACIG00000004097	chd9	98	84.053	Amphilophus_citrinellus
ENSSLDG00000017818	chd9	99	94.438	ENSAOCG00000005487	chd9	99	93.793	Amphiprion_ocellaris
ENSSLDG00000017818	chd9	99	94.478	ENSAPEG00000009859	chd9	99	93.833	Amphiprion_percula
ENSSLDG00000017818	chd9	99	93.409	ENSATEG00000002748	chd9	99	89.391	Anabas_testudineus
ENSSLDG00000017818	chd9	98	69.848	ENSAPLG00000002826	CHD9	61	77.433	Anas_platyrhynchos
ENSSLDG00000017818	chd9	67	75.176	ENSACAG00000016150	CHD9	96	63.964	Anolis_carolinensis
ENSSLDG00000017818	chd9	99	61.621	ENSANAG00000015630	CHD9	92	70.922	Aotus_nancymaae
ENSSLDG00000017818	chd9	98	89.397	ENSACLG00000016899	chd9	99	86.590	Astatotilapia_calliptera
ENSSLDG00000017818	chd9	99	77.036	ENSAMXG00000005652	chd9	99	76.786	Astyanax_mexicanus
ENSSLDG00000017818	chd9	95	69.813	ENSBTAG00000002287	CHD9	84	70.578	Bos_taurus
ENSSLDG00000017818	chd9	98	68.621	ENSCJAG00000001573	CHD9	92	71.277	Callithrix_jacchus
ENSSLDG00000017818	chd9	66	75.045	ENSCAFG00000009699	CHD9	84	71.423	Canis_familiaris
ENSSLDG00000017818	chd9	66	75.045	ENSCAFG00020002879	CHD9	91	71.986	Canis_lupus_dingo
ENSSLDG00000017818	chd9	99	60.444	ENSCHIG00000021000	CHD9	61	74.486	Capra_hircus
ENSSLDG00000017818	chd9	95	69.727	ENSTSYG00000007693	CHD9	91	71.986	Carlito_syrichta
ENSSLDG00000017818	chd9	73	60.270	ENSCAPG00000011604	CHD9	57	64.368	Cavia_aperea
ENSSLDG00000017818	chd9	66	70.262	ENSCPOG00000036544	CHD9	79	67.397	Cavia_porcellus
ENSSLDG00000017818	chd9	99	61.640	ENSCCAG00000036178	CHD9	92	71.886	Cebus_capucinus
ENSSLDG00000017818	chd9	66	74.732	ENSCATG00000036753	CHD9	91	70.629	Cercocebus_atys
ENSSLDG00000017818	chd9	98	68.730	ENSCLAG00000007137	CHD9	99	78.125	Chinchilla_lanigera
ENSSLDG00000017818	chd9	65	75.866	ENSCSAG00000005311	CHD9	84	70.811	Chlorocebus_sabaeus
ENSSLDG00000017818	chd9	70	90.625	ENSCHOG00000003935	CHD9	55	90.576	Choloepus_hoffmanni
ENSSLDG00000017818	chd9	90	82.406	ENSCPBG00000012459	CHD9	96	80.275	Chrysemys_picta_bellii
ENSSLDG00000017818	chd9	99	60.392	ENSCANG00000030349	CHD9	91	71.277	Colobus_angolensis_palliatus
ENSSLDG00000017818	chd9	98	68.074	ENSCGRG00001016150	Chd9	84	70.366	Cricetulus_griseus_chok1gshd
ENSSLDG00000017818	chd9	98	68.074	ENSCGRG00000012850	Chd9	99	77.679	Cricetulus_griseus_crigri
ENSSLDG00000017818	chd9	99	87.950	ENSCSEG00000009209	chd9	99	86.511	Cynoglossus_semilaevis
ENSSLDG00000017818	chd9	97	88.076	ENSCVAG00000016195	chd9	99	81.084	Cyprinodon_variegatus
ENSSLDG00000017818	chd9	99	76.837	ENSDARG00000074498	chd9	99	76.588	Danio_rerio
ENSSLDG00000017818	chd9	93	71.059	ENSDNOG00000006045	CHD9	96	71.809	Dasypus_novemcinctus
ENSSLDG00000017818	chd9	82	68.566	ENSDORG00000008523	-	96	70.335	Dipodomys_ordii
ENSSLDG00000017818	chd9	65	91.270	ENSETEG00000009565	CHD9	76	91.129	Echinops_telfairi
ENSSLDG00000017818	chd9	88	78.854	ENSEASG00005014832	CHD9	96	78.367	Equus_asinus_asinus
ENSSLDG00000017818	chd9	65	76.306	ENSECAG00000011505	CHD9	80	70.861	Equus_caballus
ENSSLDG00000017818	chd9	81	85.714	ENSEEUG00000014515	CHD9	71	84.848	Erinaceus_europaeus
ENSSLDG00000017818	chd9	99	78.627	ENSELUG00000006031	chd9	99	78.821	Esox_lucius
ENSSLDG00000017818	chd9	95	70.219	ENSFCAG00000022534	CHD9	91	72.340	Felis_catus
ENSSLDG00000017818	chd9	99	69.267	ENSFALG00000013276	CHD9	97	70.641	Ficedula_albicollis
ENSSLDG00000017818	chd9	98	68.584	ENSFDAG00000021037	CHD9	84	71.000	Fukomys_damarensis
ENSSLDG00000017818	chd9	99	88.367	ENSFHEG00000006068	chd9	99	88.287	Fundulus_heteroclitus
ENSSLDG00000017818	chd9	80	87.195	ENSGMOG00000006040	chd9	84	87.060	Gadus_morhua
ENSSLDG00000017818	chd9	92	71.980	ENSGALG00000039178	CHD9	80	72.633	Gallus_gallus
ENSSLDG00000017818	chd9	99	89.237	ENSGAFG00000010014	chd9	99	89.438	Gambusia_affinis
ENSSLDG00000017818	chd9	96	87.691	ENSGACG00000016694	chd9	97	91.009	Gasterosteus_aculeatus
ENSSLDG00000017818	chd9	99	60.280	ENSGGOG00000014816	CHD9	92	71.631	Gorilla_gorilla
ENSSLDG00000017818	chd9	99	90.539	ENSHBUG00000023322	chd9	99	91.425	Haplochromis_burtoni
ENSSLDG00000017818	chd9	95	69.868	ENSHGLG00000014938	CHD9	99	77.567	Heterocephalus_glaber_female
ENSSLDG00000017818	chd9	96	84.200	ENSHCOG00000000937	chd9	97	84.685	Hippocampus_comes
ENSSLDG00000017818	chd9	99	78.382	ENSIPUG00000016448	chd9	97	83.039	Ictalurus_punctatus
ENSSLDG00000017818	chd9	94	70.712	ENSSTOG00000022273	CHD9	99	78.013	Ictidomys_tridecemlineatus
ENSSLDG00000017818	chd9	82	68.419	ENSJJAG00000015741	-	96	71.473	Jaculus_jaculus
ENSSLDG00000017818	chd9	99	89.968	ENSKMAG00000016784	chd9	99	90.233	Kryptolebias_marmoratus
ENSSLDG00000017818	chd9	99	91.724	ENSLBEG00000012077	chd9	99	91.680	Labrus_bergylta
ENSSLDG00000017818	chd9	95	66.475	ENSLACG00000005557	CHD9	97	59.986	Latimeria_chalumnae
ENSSLDG00000017818	chd9	99	76.037	ENSLOCG00000007225	chd9	99	75.608	Lepisosteus_oculatus
ENSSLDG00000017818	chd9	67	74.452	ENSLAFG00000015374	CHD9	84	70.606	Loxodonta_africana
ENSSLDG00000017818	chd9	94	70.008	ENSMFAG00000041354	CHD9	95	71.422	Macaca_fascicularis
ENSSLDG00000017818	chd9	66	74.732	ENSMMUG00000016310	CHD9	91	71.277	Macaca_mulatta
ENSSLDG00000017818	chd9	98	68.449	ENSMNEG00000031494	CHD9	85	72.423	Macaca_nemestrina
ENSSLDG00000017818	chd9	66	74.732	ENSMLEG00000043219	CHD9	91	71.277	Mandrillus_leucophaeus
ENSSLDG00000017818	chd9	99	92.851	ENSMAMG00000003909	chd9	99	89.195	Mastacembelus_armatus
ENSSLDG00000017818	chd9	99	92.561	ENSMZEG00005006581	chd9	99	92.762	Maylandia_zebra
ENSSLDG00000017818	chd9	98	65.132	ENSMGAG00000004642	CHD9	59	72.804	Meleagris_gallopavo
ENSSLDG00000017818	chd9	98	68.770	ENSMICG00000016679	CHD9	91	72.340	Microcebus_murinus
ENSSLDG00000017818	chd9	97	87.623	ENSMMOG00000016406	chd9	99	84.312	Mola_mola
ENSSLDG00000017818	chd9	87	72.685	ENSMODG00000013142	-	96	77.841	Monodelphis_domestica
ENSSLDG00000017818	chd9	97	90.160	ENSMALG00000013306	chd9	99	85.232	Monopterus_albus
ENSSLDG00000017818	chd9	67	73.993	MGP_CAROLIEiJ_G0031364	Chd9	61	75.348	Mus_caroli
ENSSLDG00000017818	chd9	95	69.391	ENSMUSG00000056608	Chd9	99	77.232	Mus_musculus
ENSSLDG00000017818	chd9	98	66.827	MGP_PahariEiJ_G0022964	Chd9	88	69.922	Mus_pahari
ENSSLDG00000017818	chd9	67	73.934	MGP_SPRETEiJ_G0032483	Chd9	79	70.204	Mus_spretus
ENSSLDG00000017818	chd9	98	68.539	ENSMPUG00000003285	CHD9	84	70.984	Mustela_putorius_furo
ENSSLDG00000017818	chd9	65	75.942	ENSMLUG00000004456	CHD9	79	70.297	Myotis_lucifugus
ENSSLDG00000017818	chd9	99	92.277	ENSNBRG00000009423	chd9	99	92.116	Neolamprologus_brichardi
ENSSLDG00000017818	chd9	85	71.488	ENSNLEG00000001026	CHD9	85	72.499	Nomascus_leucogenys
ENSSLDG00000017818	chd9	72	95.489	ENSMEUG00000008222	-	74	92.208	Notamacropus_eugenii
ENSSLDG00000017818	chd9	56	95.489	ENSOPRG00000011168	CHD9	72	86.932	Ochotona_princeps
ENSSLDG00000017818	chd9	98	68.989	ENSODEG00000004466	CHD9	84	70.805	Octodon_degus
ENSSLDG00000017818	chd9	97	91.458	ENSONIG00000002816	chd9	98	91.376	Oreochromis_niloticus
ENSSLDG00000017818	chd9	67	75.059	ENSOANG00000013401	CHD9	84	72.432	Ornithorhynchus_anatinus
ENSSLDG00000017818	chd9	99	68.534	ENSOCUG00000001016	CHD9	96	69.509	Oryctolagus_cuniculus
ENSSLDG00000017818	chd9	96	89.100	ENSORLG00000013810	chd9	96	86.980	Oryzias_latipes
ENSSLDG00000017818	chd9	97	83.545	ENSORLG00020020665	chd9	98	80.326	Oryzias_latipes_hni
ENSSLDG00000017818	chd9	97	89.122	ENSORLG00015019126	chd9	97	88.300	Oryzias_latipes_hsok
ENSSLDG00000017818	chd9	64	80.975	ENSOMEG00000015978	chd9	99	80.922	Oryzias_melastigma
ENSSLDG00000017818	chd9	95	69.835	ENSOGAG00000002110	CHD9	84	70.576	Otolemur_garnettii
ENSSLDG00000017818	chd9	95	69.732	ENSOARG00000017664	CHD9	84	70.490	Ovis_aries
ENSSLDG00000017818	chd9	96	68.406	ENSPPAG00000039388	-	96	70.711	Pan_paniscus
ENSSLDG00000017818	chd9	95	70.260	ENSPPRG00000004801	CHD9	91	71.986	Panthera_pardus
ENSSLDG00000017818	chd9	95	69.145	ENSPTIG00000021854	CHD9	91	63.475	Panthera_tigris_altaica
ENSSLDG00000017818	chd9	98	68.717	ENSPTRG00000008113	CHD9	92	71.631	Pan_troglodytes
ENSSLDG00000017818	chd9	99	68.294	ENSPANG00000019307	CHD9	95	71.307	Papio_anubis
ENSSLDG00000017818	chd9	97	77.728	ENSPKIG00000021876	chd9	96	79.287	Paramormyrops_kingsleyae
ENSSLDG00000017818	chd9	97	71.556	ENSPKIG00000025401	-	80	72.746	Paramormyrops_kingsleyae
ENSSLDG00000017818	chd9	56	77.028	ENSPSIG00000008099	CHD9	78	78.714	Pelodiscus_sinensis
ENSSLDG00000017818	chd9	85	71.336	ENSPCIG00000017215	CHD9	97	73.469	Phascolarctos_cinereus
ENSSLDG00000017818	chd9	99	89.399	ENSPFOG00000015839	chd9	99	84.771	Poecilia_formosa
ENSSLDG00000017818	chd9	99	89.827	ENSPLAG00000011118	chd9	99	90.028	Poecilia_latipinna
ENSSLDG00000017818	chd9	99	87.369	ENSPMEG00000015106	chd9	99	82.099	Poecilia_mexicana
ENSSLDG00000017818	chd9	96	90.702	ENSPREG00000006473	chd9	99	89.349	Poecilia_reticulata
ENSSLDG00000017818	chd9	99	61.686	ENSPPYG00000007348	CHD9	84	70.682	Pongo_abelii
ENSSLDG00000017818	chd9	73	78.837	ENSPCAG00000007564	CHD9	83	81.056	Procavia_capensis
ENSSLDG00000017818	chd9	98	67.029	ENSPCOG00000028433	CHD9	93	69.760	Propithecus_coquereli
ENSSLDG00000017818	chd9	90	74.048	ENSPVAG00000015617	CHD9	90	73.583	Pteropus_vampyrus
ENSSLDG00000017818	chd9	99	92.360	ENSPNYG00000010947	chd9	99	92.039	Pundamilia_nyererei
ENSSLDG00000017818	chd9	99	78.197	ENSPNAG00000024141	chd9	99	77.848	Pygocentrus_nattereri
ENSSLDG00000017818	chd9	86	68.433	ENSRNOG00000049302	Chd9	76	81.121	Rattus_norvegicus
ENSSLDG00000017818	chd9	98	68.717	ENSRBIG00000035553	CHD9	96	71.307	Rhinopithecus_bieti
ENSSLDG00000017818	chd9	96	69.532	ENSRROG00000033278	CHD9	96	71.404	Rhinopithecus_roxellana
ENSSLDG00000017818	chd9	98	68.853	ENSSBOG00000030240	CHD9	92	71.277	Saimiri_boliviensis_boliviensis
ENSSLDG00000017818	chd9	98	69.209	ENSSHAG00000002719	CHD9	84	71.375	Sarcophilus_harrisii
ENSSLDG00000017818	chd9	96	79.111	ENSSFOG00015020209	chd9	99	77.177	Scleropages_formosus
ENSSLDG00000017818	chd9	99	73.496	ENSSFOG00015001327	chd9	96	74.465	Scleropages_formosus
ENSSLDG00000017818	chd9	99	93.015	ENSSMAG00000008953	chd9	99	93.280	Scophthalmus_maximus
ENSSLDG00000017818	chd9	100	99.000	ENSSDUG00000006139	chd9	100	99.000	Seriola_dumerili
ENSSLDG00000017818	chd9	71	77.666	ENSSARG00000010632	CHD9	57	77.471	Sorex_araneus
ENSSLDG00000017818	chd9	99	94.277	ENSSPAG00000021649	chd9	99	94.196	Stegastes_partitus
ENSSLDG00000017818	chd9	98	67.147	ENSSSCG00000033591	CHD9	61	75.483	Sus_scrofa
ENSSLDG00000017818	chd9	86	72.892	ENSTGUG00000007476	CHD9	86	74.197	Taeniopygia_guttata
ENSSLDG00000017818	chd9	99	86.564	ENSTRUG00000009125	chd9	99	81.897	Takifugu_rubripes
ENSSLDG00000017818	chd9	77	69.794	ENSTNIG00000003825	chd9	84	99.408	Tetraodon_nigroviridis
ENSSLDG00000017818	chd9	61	94.915	ENSTBEG00000016052	-	66	94.737	Tupaia_belangeri
ENSSLDG00000017818	chd9	84	71.409	ENSTTRG00000012674	CHD9	77	71.355	Tursiops_truncatus
ENSSLDG00000017818	chd9	76	66.615	ENSUAMG00000022706	CHD9	95	69.994	Ursus_americanus
ENSSLDG00000017818	chd9	75	85.595	ENSUMAG00000004043	CHD9	96	85.893	Ursus_maritimus
ENSSLDG00000017818	chd9	97	68.090	ENSVPAG00000001374	CHD9	81	69.673	Vicugna_pacos
ENSSLDG00000017818	chd9	66	74.985	ENSVVUG00000019435	CHD9	84	71.320	Vulpes_vulpes
ENSSLDG00000017818	chd9	97	67.191	ENSXETG00000000349	chd9	78	75.654	Xenopus_tropicalis
ENSSLDG00000017818	chd9	99	88.822	ENSXCOG00000012997	chd9	99	89.225	Xiphophorus_couchianus
ENSSLDG00000017818	chd9	99	90.125	ENSXMAG00000016192	chd9	99	90.402	Xiphophorus_maculatus