EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000017849 (Gene tree)
Gene ID: -
Gene Symbol: npm1a
Alias: npm1|sb:cb487
Full Name: nucleophosmin-like
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 6917 bases
Position: chrPEQF01099060.1:1176418-1183334
Accession: 111663948
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000022864	Nucleoplasmin	PF03066.15	4.4e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000023601	-	2545	XM_023418362	ENSSLDP00000022864	297 (aa)	XP_023274130	-

Gene Model

Click here to download ENSSLDG00000017849's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000017849's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000017849	npm1a	96	40.850	ENSSLDG00000021396	npm1b	95	42.525

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000017849	npm1a	100	79.470	ENSAPOG00000002813	npm1a	100	79.139	Acanthochromis_polyacanthus
ENSSLDG00000017849	npm1a	94	78.169	ENSACIG00000014201	npm1a	100	78.169	Amphilophus_citrinellus
ENSSLDG00000017849	npm1a	89	71.970	ENSAOCG00000004978	npm1a	100	70.455	Amphiprion_ocellaris
ENSSLDG00000017849	npm1a	100	80.936	ENSAPEG00000008594	npm1a	100	80.936	Amphiprion_percula
ENSSLDG00000017849	npm1a	100	82.958	ENSATEG00000008885	npm1a	100	82.637	Anabas_testudineus
ENSSLDG00000017849	npm1a	95	73.684	ENSACLG00000008376	npm1a	94	73.050	Astatotilapia_calliptera
ENSSLDG00000017849	npm1a	98	57.877	ENSAMXG00000010155	npm1a	99	60.274	Astyanax_mexicanus
ENSSLDG00000017849	npm1a	100	59.732	ENSCSEG00000011165	npm1a	93	87.705	Cynoglossus_semilaevis
ENSSLDG00000017849	npm1a	100	71.477	ENSCVAG00000008960	npm1a	100	71.477	Cyprinodon_variegatus
ENSSLDG00000017849	npm1a	98	63.014	ENSDARG00000014329	npm1a	94	69.231	Danio_rerio
ENSSLDG00000017849	npm1a	95	36.420	ENSEBUG00000012753	npm1a	91	36.420	Eptatretus_burgeri
ENSSLDG00000017849	npm1a	100	71.572	ENSELUG00000013705	npm1a	100	70.903	Esox_lucius
ENSSLDG00000017849	npm1a	100	75.248	ENSFHEG00000012496	npm1a	100	74.257	Fundulus_heteroclitus
ENSSLDG00000017849	npm1a	100	66.997	ENSGAFG00000013059	npm1a	100	67.327	Gambusia_affinis
ENSSLDG00000017849	npm1a	99	72.542	ENSGACG00000020319	npm1a	99	71.525	Gasterosteus_aculeatus
ENSSLDG00000017849	npm1a	99	73.817	ENSHBUG00000000776	npm1a	99	73.734	Haplochromis_burtoni
ENSSLDG00000017849	npm1a	100	57.049	ENSHCOG00000001059	npm1a	100	57.377	Hippocampus_comes
ENSSLDG00000017849	npm1a	98	60.870	ENSIPUG00000019452	npm1	99	60.403	Ictalurus_punctatus
ENSSLDG00000017849	npm1a	100	73.064	ENSKMAG00000010709	npm1a	100	72.391	Kryptolebias_marmoratus
ENSSLDG00000017849	npm1a	100	76.254	ENSLBEG00000008793	npm1a	100	76.254	Labrus_bergylta
ENSSLDG00000017849	npm1a	85	54.613	ENSLOCG00000009683	npm1a	100	54.104	Lepisosteus_oculatus
ENSSLDG00000017849	npm1a	100	79.530	ENSMAMG00000009344	npm1a	83	78.523	Mastacembelus_armatus
ENSSLDG00000017849	npm1a	99	74.051	ENSMZEG00005013717	npm1a	100	73.734	Maylandia_zebra
ENSSLDG00000017849	npm1a	95	79.859	ENSMMOG00000007980	npm1a	100	80.212	Mola_mola
ENSSLDG00000017849	npm1a	100	77.076	ENSMALG00000001146	npm1a	100	79.402	Monopterus_albus
ENSSLDG00000017849	npm1a	99	71.069	ENSNBRG00000013172	npm1a	100	71.069	Neolamprologus_brichardi
ENSSLDG00000017849	npm1a	99	73.267	ENSONIG00000001860	npm1a	98	72.667	Oreochromis_niloticus
ENSSLDG00000017849	npm1a	100	75.758	ENSORLG00000010179	npm1a	100	74.747	Oryzias_latipes
ENSSLDG00000017849	npm1a	100	75.421	ENSORLG00020020817	npm1a	100	75.084	Oryzias_latipes_hni
ENSSLDG00000017849	npm1a	100	75.758	ENSORLG00015003439	npm1a	100	74.747	Oryzias_latipes_hsok
ENSSLDG00000017849	npm1a	100	75.084	ENSOMEG00000007083	npm1a	100	74.747	Oryzias_melastigma
ENSSLDG00000017849	npm1a	100	56.250	ENSPKIG00000023943	npm1a	100	56.250	Paramormyrops_kingsleyae
ENSSLDG00000017849	npm1a	100	58.923	ENSPMGG00000011716	npm1a	100	58.923	Periophthalmus_magnuspinnatus
ENSSLDG00000017849	npm1a	100	69.536	ENSPFOG00000019173	npm1a	100	69.536	Poecilia_formosa
ENSSLDG00000017849	npm1a	100	65.217	ENSPLAG00000001093	npm1a	100	65.217	Poecilia_latipinna
ENSSLDG00000017849	npm1a	100	69.536	ENSPMEG00000012523	npm1a	100	69.536	Poecilia_mexicana
ENSSLDG00000017849	npm1a	100	70.530	ENSPREG00000001647	npm1a	100	70.530	Poecilia_reticulata
ENSSLDG00000017849	npm1a	99	76.282	ENSPNYG00000019321	npm1a	100	75.641	Pundamilia_nyererei
ENSSLDG00000017849	npm1a	98	60.201	ENSPNAG00000026891	npm1a	99	60.535	Pygocentrus_nattereri
ENSSLDG00000017849	npm1a	100	61.462	ENSSFOG00015007074	npm1a	100	61.130	Scleropages_formosus
ENSSLDG00000017849	npm1a	100	81.000	ENSSMAG00000019090	npm1a	100	80.667	Scophthalmus_maximus
ENSSLDG00000017849	npm1a	100	98.658	ENSSDUG00000015609	npm1a	100	98.658	Seriola_dumerili
ENSSLDG00000017849	npm1a	100	61.953	ENSSPAG00000021660	npm1a	94	59.044	Stegastes_partitus
ENSSLDG00000017849	npm1a	100	76.568	ENSTRUG00000024003	npm1a	100	76.898	Takifugu_rubripes
ENSSLDG00000017849	npm1a	100	76.510	ENSTNIG00000010773	npm1a	100	76.510	Tetraodon_nigroviridis
ENSSLDG00000017849	npm1a	99	62.712	ENSXCOG00000005958	npm1a	100	64.057	Xiphophorus_couchianus
ENSSLDG00000017849	npm1a	100	70.066	ENSXMAG00000000396	npm1a	100	70.066	Xiphophorus_maculatus